DN617404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 3 Query: 93 PALLLTGSLDETVKLWRPDDMQLERTN-TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 560 P L++GS D T+ LW P + + T TGH + V P I ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L L E V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADE-------------VYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: GBLP_CAEEL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Caenorhabditis elegans GN=rack-1 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 48/179 (26.82%), Postives = 82/179 (45.81%), Query Frame = 3 Query: 33 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 569 ++ H + V V + P+ R ++++ D+ VK+W + +L+ + GH V +V P G + AS D ++D++ + TL + + M F P L A G +S+K+WD I L +PE S +S+AWS DG+ + G D I V+ V+ Sbjct: 150 DDCHTDWVSTVRFSPSN--RDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLCAAVG--SSIKIWDLEDKKEIEEL---KPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQVS 320
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: CIAO1_SCHJA (Probable cytosolic iron-sulfur protein assembly protein OS=Schistosoma japonicum PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11 Identity = 54/194 (27.84%), Postives = 80/194 (41.24%), Query Frame = 3 Query: 42 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDD---MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVF--DVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWD-------TATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLH 587 H V V W P+ L+ T D++V LW DD +Q H V SVA HP G + S S D+ + V+ ++D A L S VW+ +F P G LA + VKLW +++W IATLS + + + WSPD + +A D + ++ + H Sbjct: 107 HTSEVKCVAWCPSGH----LIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILA-SCSDDLCVKLWSWEGVCGKSSSWMCIATLS------------GYHTRTIFDLNWSPDSQLLASCGSDNRLCIYKMPANGLTH 283
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: PRP46_SCHPO (Pre-mRNA-splicing factor prp46 OS=Schizosaccharomyces pombe GN=prp5 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 54/187 (28.88%), Postives = 77/187 (41.18%), Query Frame = 3 Query: 69 WVPATETRPA--LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLESHFMPVRSL 623 WV + P TG+ D T+K+W L+ T TGH V +A P S D V+ +D++TN I S V+ ++ P L V G A ++WD T + L S K V S+A ++ GSMD TI ++D+ K L L H VR+L Sbjct: 165 WVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVL-VTAGRDAVARVWDMRTRQNVHVL-------------SGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRAL 337
BLAST of DN617404 vs. ExPASy Swiss-Prot
Match: HIR1_CRYNE (Protein HIR1 OS=Cryptococcus neoformans GN=HIR1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11 Identity = 56/191 (29.32%), Postives = 84/191 (43.98%), Query Frame = 3 Query: 36 NAHEESVWAVTWVPATETRPALLLTGSLDETV-----------KLWRPDDMQLERTNT-----GHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIAC-GSMDGTISV 557 ++H SV +V W L TGS D+ + +LW D++ +E GH VV +A + AS LDS V ++D T + L+ V + +DP G LA +VK+W+T W+L T+S KP + S F ++WSPDG IA +M+G + V Sbjct: 70 SSHTGSVLSVRWAH----HGRFLATGSDDQVIMIWGLDPDGGGRLWGSDEINVENWKALTRLVGHVADVVDLAWSRDDTMLASVGLDSTVWIWDGLTFERLRKLDLHQGFVKGVCWDPVGNYLATQ-SDDKTVKIWNTEDWSLAETIS-------KPFETSPQSTFFRRLSWSPDGAFIAASNAMNGPVFV 248 The following BLAST results are available for this feature:
BLAST of DN617404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617404 ID=DN617404; Name=DN617404; organism=Citrus sinensis; type=EST; length=627bpback to top |