DN617328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_AEDAE (40S ribosomal protein S3a OS=Aedes aegypti GN=AAEL005901 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.921e-63 Identity = 120/199 (60.30%), Postives = 149/199 (74.87%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 DWYD+KAP+ F R VGKTLV RTQGT+IAS+GLK RVFEVSL DL N+ E ++RK +L AEDV G+NVL NF GM TTDKLRS+V+KW TLIE VDVKTTD + LR+FCIGFT + ++TCYAQ SQI++IRRKM I+ S DLK +V K + + I ++IEK+ IYPL +V+IRKVK+LK P+FD Sbjct: 29 DWYDVKAPNMFSNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNDTDAERSFRKFKLIAEDVHGRNVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFCIGFTIKDSVSQRKTCYAQHSQIKEIRRKMTTIITRDVTSSDLKEVVNKLLPDSIAKDIEKSCQGIYPLHDVYIRKVKVLKKPRFD 227
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_UNCRE (40S ribosomal protein S1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=RPS1 PE=3 SV=2) HSP 1 Score: 239.58 bits (610), Expect = 1.319e-62 Identity = 125/197 (63.45%), Postives = 153/197 (77.66%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 D Y +KAPS F R+VGKT+V RT G K A++ LK R+FEVSL DL N++ H++RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW +LIEA V VKTTD++ +RLF I FTKR QVK+T YA++SQIR IR+KM EI+ +A++ L L K + EVIGREIEKAT IYPLQNV IRKVK+LK PKFD Sbjct: 28 DEYLVKAPSTFATRDVGKTIVNRTVGLKNANDSLKGRIFEVSLADLQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASTRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFD 223
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_ZYGRC (40S ribosomal protein S1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS1 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.723e-62 Identity = 116/197 (58.88%), Postives = 145/197 (73.60%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WYDIKAPS F+ RNVGKTLV R+ G K AS+ LK RV E L DL E+H++RKI+LR ++VQGKN+LTN GM FTTDK RS+VRKW TLIEA V VKT+D + +R+F I FT++ PNQVK+TCYAQ+S IR IR+ EI+ + + L K I EVI +E+E AT I+PLQNV +RKVK+LK PKFD Sbjct: 28 EWYDIKAPSTFKNRNVGKTLVNRSAGLKSASDTLKGRVVEACLADLQGSEDHSFRKIKLRVDEVQGKNLLTNIHGMDFTTDKYRSMVRKWQTLIEAQVTVKTSDEYVIRVFAIAFTRKQPNQVKKTCYAQSSHIRAIRKVFSEILTREVQNSTLAQFTSKLIPEVINKEMENATKDIFPLQNVHVRKVKLLKQPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_LACTC (40S ribosomal protein S1 OS=Lachancea thermotolerans (strain CBS 6340) GN=RPS1 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.723e-62 Identity = 118/197 (59.90%), Postives = 145/197 (73.60%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF G+ TTDK RS+VRKW TLIEA V VKT D + LR+F I FT+R PNQVK+ CYAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT I+PLQNV IRKVK+LK PKFD Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKNASDYLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDLTTDKYRSMVRKWQTLIEANVTVKTADEYVLRVFAIAFTRRQPNQVKKACYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_CANGA (40S ribosomal protein S1 OS=Candida glabrata GN=RPS1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.939e-62 Identity = 117/197 (59.39%), Postives = 146/197 (74.11%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WYDIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR +DVQGKN+LTNF GM FT DKLRS+VRKW TLIEA V VKT+D + +R+F I FT++ NQVKRT YAQ+S IR IR+ + +I+ + ++ L K I EVI +EIE AT I+PLQNV IRKVK+LK PKFD Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDDVQGKNLLTNFHGMDFTADKLRSMVRKWQTLIEANVTVKTSDEYIIRVFAIAFTRKQSNQVKRTAYAQSSHIRAIRKVISDILTREVSNSTLAQFTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_VANPO (40S ribosomal protein S1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=RPS1 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.012e-62 Identity = 118/197 (59.90%), Postives = 147/197 (74.62%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +W+DIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM FTTDK+RS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKRT YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT I+PLQNV IRKVK+LK PKFD Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNAADALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKVRSMVRKWQTLIEANVTVKTSDDYVLRVFAIAFTRKQSNQVKRTSYAQSSHIRAIRKVISEILTREVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_ASHGO (40S ribosomal protein S1 OS=Ashbya gossypii GN=RPS1 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.012e-62 Identity = 117/197 (59.39%), Postives = 147/197 (74.62%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +WYDIKAPS F RNVGKTLV ++ G K A++ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF G+ FTTDKLRS+VRKW TLIEA V VKT D++ LR+F I FT+R NQ+K+T YAQ+S IR IR+ + EI+ + + L L K I EVI +EIE AT I+PLQNV IRKVK+LK PKFD Sbjct: 28 EWYDIKAPSTFENRNVGKTLVNKSTGLKNAADFLKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGLDFTTDKLRSMVRKWQTLIEANVTVKTADDYVLRVFAIAFTRRQSNQIKKTSYAQSSHIRAIRKVISEILTREVQNATLAQLTSKLIPEVINKEIENATKDIFPLQNVHIRKVKLLKQPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_ANODA (40S ribosomal protein S3a OS=Anopheles darlingi PE=2 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.012e-62 Identity = 118/199 (59.30%), Postives = 151/199 (75.88%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 DWYD+KAP+ F+ R VGKTLV RTQGT+IAS+GLK RVFEVSL DL NE+ E ++RK +L AE V G++VL NF GM TTDKLRS+V+KW TLIE VDVKTTD + LR+FCIGFT + ++TCYAQ SQI+ IR++M I+ + + DLK +VEK + + I ++IEKA +YPL +VFIRKVK+LK P+FD Sbjct: 29 DWYDVKAPNMFKNRQVGKTLVNRTQGTRIASDGLKGRVFEVSLADLQNEQDAERSFRKFKLIAESVNGRDVLCNFHGMDLTTDKLRSMVKKWQTLIECSVDVKTTDGYLLRVFCIGFTIKDSVSQRKTCYAQHSQIKNIRQRMTTIIKREIINSDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVFIRKVKVLKKPRFD 227
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAST (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae GN=RPS1A PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 6.546e-62 Identity = 117/197 (59.39%), Postives = 146/197 (74.11%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT I+PLQN+ +RKVK+LK PKFD Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFD 224
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS7 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1A PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.546e-62 Identity = 117/197 (59.39%), Postives = 146/197 (74.11%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFD 726 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR YAQ+S IR IR+ + EI+ + L L K I EVI +EIE AT I+PLQN+ +RKVK+LK PKFD Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFD 224 The following BLAST results are available for this feature:
BLAST of DN617328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617328 ID=DN617328; Name=DN617328; organism=Citrus sinensis; type=EST; length=728bpback to top |