DN617328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_PYRFU (30S ribosomal protein S3Ae OS=Pyrococcus furiosus GN=rps3Ae PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19 Identity = 64/194 (32.99%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 139 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 720 WY I AP F VG T E + +RV EV+L D+ + ++ K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ + R QTSQ R IR+ M+EI+ +A + K V + + I EI K IYPL+ IRK+K+L+ P+ Sbjct: 18 WYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTKSHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAKKIYPLRKAEIRKIKVLEEPQ 195
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_ARCFU (30S ribosomal protein S3Ae OS=Archaeoglobus fulgidus GN=rps3Ae PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.854e-19 Identity = 61/195 (31.28%), Postives = 98/195 (50.26%), Query Frame = 1 Query: 139 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 717 W+ + AP F + +G+T +K+ R E +L +L N+ ++ Y+K+ + V G N T FW T + L SL R+ + IE VDV T D + LR+ + FT R +TSQ R IR MR+I+V +A+S + +++ + + EI K IYP++ V IRK+++L P Sbjct: 19 WFTLIAPEYFGMAELGET--PADDASKVVG-----RTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVR---------RCKTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_PYRHO (30S ribosomal protein S3Ae OS=Pyrococcus horikoshii GN=rps3Ae PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.951e-19 Identity = 64/194 (32.99%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 139 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 720 WY I AP F VG T E + +RV EV+L D+ + + K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ + R QTSQ R IR+ M+EI+ +A + K V + + I EI K IYPL+ IRK+K+L P+ Sbjct: 20 WYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMAIAMR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEGKKIYPLKKAEIRKIKVLGEPE 197
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_METKA (30S ribosomal protein S3Ae OS=Methanopyrus kandleri GN=rps3Ae PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18 Identity = 62/197 (31.47%), Postives = 99/197 (50.25%), Query Frame = 1 Query: 139 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIA----EVIGREIEKATSSIYPLQNVFIRKVKILKAP 717 WY I AP F VG+T E + RV E +LGD+L++ + K+ R DV+G + F G D +RSLVR+ + I+ +DV T D + +R+ + FT R A+TSQ R IR++M +++ A CD + + ++ E I +I++A IYP++ IRK ++L+ P Sbjct: 11 WYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHHIKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTR---------RAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_PYRAB (30S ribosomal protein S3Ae OS=Pyrococcus abyssi GN=rps3Ae PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.604e-18 Identity = 64/194 (32.99%), Postives = 93/194 (47.94%), Query Frame = 1 Query: 139 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 720 WY I AP F VG T E + +RV EV+L D+ + + K+ + DV+G+N T F GM +RSLVR+ T I+ ++ T D + LR+ + R QTSQ R IR+ M+EI+ +A + K V + + I EI K IYPL+ IRK+K+L P+ Sbjct: 19 WYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLKGHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVIAAR---------RIQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAKKIYPLKKAEIRKIKVLGEPE 196
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_METBF (30S ribosomal protein S3Ae OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/198 (31.31%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCY----AQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 717 +WY+I+AP+ VG T+ G G R E ++G+L N+ K+ LR +V G T+ G TTD +RS+V++ + I+A +DVKT D + +R VK TC+ A++SQI+ IR M I+ +A+ D ++ +++ I + I + IYPL+ V IRK ++ AP Sbjct: 17 EWYNIEAPAYLNRAIVGNTMA----GDPSLLVG---RNIETTVGELTNDMTKNNTKVILRINNVVGDVATTDLMGHELTTDYIRSIVKRQTSRIDANIDVKTKDGYIIR-------------VKPTCFTIKRARSSQIKAIREMMVNIVAKRASEADFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAAP 194
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_METAC (30S ribosomal protein S3Ae OS=Methanosarcina acetivorans GN=rps3Ae PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 63/198 (31.82%), Postives = 99/198 (50.00%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCY----AQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 717 +WY+I+AP VG T+ G G R E ++G+L N+ K+ LR +V G T+ G TTD +RS+V++ + I+A VDVKT D + +R VK TC+ A++SQ++ IR M EI+ +AA D ++ +++ I + I + IYPL+ V IRK ++ P Sbjct: 17 EWYNIEAPVYLNRAIVGNTMA----GDPSLLVG---RNVETTVGELTNDMTKNNTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIR-------------VKPTCFTIKRARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTEVETIP 194
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_DESK1 (30S ribosomal protein S3Ae OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 58/193 (30.05%), Postives = 90/193 (46.63%), Query Frame = 1 Query: 139 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 717 WY++ AP+ F +G T E L RV E +L D+ + + K+ + + G LT F G D +RSLVR+ + I+ D+ T D + LR+ + T N TSQ + IRR MRE + +A+ L LV++ ++ I EI + IYP++ V + K K+L P Sbjct: 18 WYEVVAPTSFGGITLGSTPADDP-------EKLIGRVIETTLYDITGDITQVHVKLYFQIISIDGNKALTRFKGHELARDYMRSLVRRKSSKIQGIFDINTKDGYVLRVTIVALTSYRCN---------TSQKKAIRRVMREYIFKKASELTLDELVQEIMSYKISNEIAELARKIYPIRRVEVYKTKLLLIP 194
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_METMA (30S ribosomal protein S3Ae OS=Methanosarcina mazei GN=rps3Ae PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16 Identity = 61/198 (30.81%), Postives = 100/198 (50.51%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCY----AQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAP 717 +WY+I+AP+ VG T+ G G R E ++G+L N+ K+ LR +V G T+ G TTD +RS+V++ + I+A VDV+T D F +R VK TC+ A++SQ++ IR M +I+ +A+ D ++ +++ I + I + IYPL+ V IRK ++ P Sbjct: 17 EWYNIEAPAYLNRVIVGTTMA----GDPSLLVG---RNVETTVGELTNDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIR-------------VKPTCFTIKRARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
BLAST of DN617328 vs. ExPASy Swiss-Prot
Match: RS3A_THEON (30S ribosomal protein S3Ae OS=Thermococcus onnurineus (strain NA1) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 57/195 (29.23%), Postives = 92/195 (47.18%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPK 720 +WY + AP F + +G T E + RV E +L DL + K+ + DV+G+N T F G + + +RSLVR+ T ++ ++ T D + LR+ + R QTSQ R IR MR+I+ +A + K + + + + EI K IYP++ IRK+K+L P+ Sbjct: 21 EWYVVYAPDFFGNKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTKGQVKLYFQIYDVKGQNAYTKFKGHTLSRSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYRR---------IQTSQERAIREIMRDIIYKKAEELNYKDFILEAVTGKMATEIAKEARKIYPIKRAEIRKIKVLAEPE 199 The following BLAST results are available for this feature:
BLAST of DN617328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617328 ID=DN617328; Name=DN617328; organism=Citrus sinensis; type=EST; length=728bpback to top |