DN617298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_HALDI (Tubulin beta chain (Fragment) OS=Haliotis discus PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33 Identity = 63/72 (87.50%), Postives = 71/72 (98.61%), Query Frame = -3 Query: 479 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 694 WIPNNVK++VCDIPPRGL M++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM Sbjct: 270 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 341
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_ECHMU (Tubulin beta-3 chain OS=Echinococcus multilocularis GN=TUB-3 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33 Identity = 63/84 (75.00%), Postives = 77/84 (91.67%), Query Frame = -3 Query: 443 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 694 WIPNNVK++VCDIPP +A TFIGN+T+IQE+F RVS+QF+AMFRR+AFLH++T EGMDEMEF+EAESNMNDL+SEYQQYQ+ Sbjct: 344 WIPNNVKTAVCDIPPIDFKVAGTFIGNTTAIQELFTRVSDQFSAMFRRRAFLHFFTSEGMDEMEFSEAESNMNDLISEYQQYQE 427
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_PORYE (Tubulin beta chain OS=Porphyra yezoensis GN=TUBB1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.911e-33 Identity = 63/86 (73.26%), Postives = 76/86 (88.37%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPN +K+SVCD+ P G +M++ FIGNST+IQ++F+RV F+AMF+RKAFLHWYTGEGMDEMEFTEAESNMNDLVSE QQY+ AT Sbjct: 344 WIPNAIKASVCDVAPTGETMSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLVSELQQYEAAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_PORPU (Tubulin beta chain OS=Porphyra purpurea GN=TUBB1 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.911e-33 Identity = 63/86 (73.26%), Postives = 76/86 (88.37%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPN +K+SVCD+ P G +M++ FIGNST+IQ++F+RV F+AMF+RKAFLHWYTGEGMDEMEFTEAESNMNDLVSE QQY+ AT Sbjct: 344 WIPNAIKASVCDVAPTGETMSAAFIGNSTAIQDIFKRVGSHFSAMFKRKAFLHWYTGEGMDEMEFTEAESNMNDLVSELQQYEAAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_DICDI (Tubulin beta chain OS=Dictyostelium discoideum GN=tubB PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.008e-32 Identity = 62/84 (73.81%), Postives = 75/84 (89.29%), Query Frame = -3 Query: 443 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQD 694 WIP+N+KSS+CDIPP+G MA TFIGN+T+IQ++F+R+S F AMFRRKAFLHWYT EGM+E+EFTEAESNMNDLV EYQQY + Sbjct: 349 WIPHNIKSSICDIPPKGTPMAVTFIGNNTAIQDLFKRISIHFQAMFRRKAFLHWYTLEGMEELEFTEAESNMNDLVYEYQQYSN 432
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_USTVI (Tubulin beta chain OS=Ustilago violacea PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.535e-32 Identity = 59/85 (69.41%), Postives = 75/85 (88.24%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNNV+S+ C++ PRGL M+ TFIGN+TSIQE+F+RV + F MFRR+AFLHWYTGEGMDEMEF+EA +NM+DL++EY QYQ+A Sbjct: 344 WIPNNVQSAHCEVAPRGLKMSVTFIGNNTSIQELFKRVGDHFDVMFRRRAFLHWYTGEGMDEMEFSEASANMHDLIAEYTQYQEA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_SOYBN (Tubulin beta chain (Fragment) OS=Glycine max GN=TUBB PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31 Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = -3 Query: 500 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 694 WIPNNVKSSVCDIPP+GL MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF Sbjct: 344 WIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEF 408
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_GEOCN (Tubulin beta-2 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 53/85 (62.35%), Postives = 75/85 (88.24%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNNV++SVC++PP+GL+ ++TFI NST++QE+F R + QF+ MF+RK FLHWYTGEGM+ +EF+EA+S++ DL+ EYQQYQ+A Sbjct: 346 WIPNNVQTSVCNVPPKGLTTSATFIANSTAVQELFERTANQFSVMFKRKGFLHWYTGEGMEPVEFSEAQSDLEDLILEYQQYQNA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB1_CHOCR (Tubulin beta-1 chain OS=Chondrus crispus GN=TUBB PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.363e-29 Identity = 58/87 (66.67%), Postives = 72/87 (82.76%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIP+N+K+SVCDIP G ++S FIGN+T+I+ F+R QF +MFRRKAFLHWY EGMDE+EF+EAESN+ DLVSEYQQY +ATA Sbjct: 346 WIPHNIKTSVCDIPAAGEKISSAFIGNTTAIEATFKRFGNQFRSMFRRKAFLHWYKSEGMDELEFSEAESNLADLVSEYQQYGEATA 432
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_SUIBO (Tubulin beta-2 chain OS=Suillus bovinus GN=TUBB2 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.725e-28 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIP+NV S+C +PP G A+ + NST +QE+F+R +QF MF+R+AFLHWYTGEGMD MEFTEAESN DL+SEYQQYQ+AT Sbjct: 348 WIPDNVSVSLCSVPPVGQPQAAVALANSTCMQELFKRNLDQFALMFKRRAFLHWYTGEGMDVMEFTEAESNTQDLISEYQQYQEAT 433 The following BLAST results are available for this feature:
BLAST of DN617298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617298 ID=DN617298; Name=DN617298; organism=Citrus sinensis; type=EST; length=696bpback to top |