DN617298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: YI016_HUMAN (Putative tubulin beta chain-like protein ENSP00000290377 OS=Homo sapiens PE=5 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.097e-38 Identity = 72/87 (82.76%), Postives = 82/87 (94.25%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 W P+NVK+++CDIPPRGL M+++FIGN+ +IQE+F VSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 272 WFPDNVKTAICDIPPRGLKMSASFIGNNAAIQELFTCVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 358
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_PENDI (Tubulin beta chain OS=Penicillium digitatum GN=TUB2 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.097e-38 Identity = 70/86 (81.40%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C +PPRGL M+STF+GNSTSIQE+F+RV +QF AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A+ Sbjct: 344 WIPNNVQTALCSVPPRGLKMSSTFVGNSTSIQELFKRVGDQFAAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_EMENI (Tubulin beta-2 chain OS=Emericella nidulans GN=tubC PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.097e-38 Identity = 70/86 (81.40%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C +PP+GL MA+TF+GNSTS+QE+F RVS QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ+AT Sbjct: 344 WIPNNVQTALCSMPPKGLKMAATFVGNSTSVQELFNRVSNQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLMSEYQQYQEAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_AJECA (Tubulin beta chain OS=Ajellomyces capsulata GN=TUB2 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.739e-38 Identity = 71/86 (82.56%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C IPPRGL M+STF+ NST+IQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+ Sbjct: 345 WIPNNVQTALCSIPPRGLKMSSTFVENSTAIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAS 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB2_PHYPO (Tubulin beta-2 chain OS=Physarum polycephalum GN=BETC PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.739e-38 Identity = 70/86 (81.40%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNN+KSSVCDIPP+G+ M++TFIGN+T IQE+F+R+ QF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A+ Sbjct: 344 WIPNNIKSSVCDIPPKGMKMSATFIGNNTCIQELFKRIGLQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_RHYSE (Tubulin beta chain OS=Rhynchosporium secalis PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.578e-38 Identity = 70/86 (81.40%), Postives = 81/86 (94.19%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIP NV++++C IPPRGL M+STF+GNSTSIQE+F+R+ +QFT MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA+ Sbjct: 344 WIPTNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRIGDQFTRMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_TRIRU (Tubulin beta chain OS=Trichophyton rubrum PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38 Identity = 70/86 (81.40%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C IPPRGL M+STF+GNSTSIQE+F+RV +QFTAMFR+KAFL WYTGEGMDEMEFTEAE+NMNDLVSEYQQYQDA+ Sbjct: 344 WIPNNVQTALCSIPPRGLQMSSTFVGNSTSIQELFKRVGDQFTAMFRKKAFLFWYTGEGMDEMEFTEAENNMNDLVSEYQQYQDAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_PNECA (Tubulin beta chain OS=Pneumocystis carinii GN=TUB-B PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.041e-37 Identity = 71/85 (83.53%), Postives = 81/85 (95.29%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNNV++++C IPPRGL M+STFIGNSTSIQE+F+RV +QF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY+ A Sbjct: 344 WIPNNVQTALCSIPPRGLKMSSTFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYEIA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_ENCIN (Tubulin beta chain OS=Encephalitozoon intestinalis GN=TUB2 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.041e-37 Identity = 69/86 (80.23%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIP+NVK++VCDI P GL M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+SEYQQYQDAT Sbjct: 344 WIPSNVKTAVCDIAPTGLEMSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLLSEYQQYQDAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_ENCHE (Tubulin beta chain OS=Encephalitozoon hellem GN=TUB2 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.041e-37 Identity = 69/86 (80.23%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIP+NVK++VCDI P GL M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+SEYQQYQDAT Sbjct: 344 WIPSNVKTAVCDIAPTGLEMSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLLSEYQQYQDAT 429 The following BLAST results are available for this feature:
BLAST of DN617298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617298 ID=DN617298; Name=DN617298; organism=Citrus sinensis; type=EST; length=696bpback to top |