DN617298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_ENCCU (Tubulin beta chain OS=Encephalitozoon cuniculi GN=TUB2 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.041e-37 Identity = 69/86 (80.23%), Postives = 82/86 (95.35%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIP+NVK++VCDI P GL M++TF+GN+TSIQE+F+R+S+QFT MFRRKAFLHWYTGEGMDEMEF+EAESNMNDL+SEYQQYQDAT Sbjct: 344 WIPSNVKTAVCDIAPTGLEMSATFVGNTTSIQELFKRISDQFTVMFRRKAFLHWYTGEGMDEMEFSEAESNMNDLLSEYQQYQDAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB3_ANEPH (Tubulin beta-3 chain (Fragment) OS=Anemia phyllitidis GN=TUBB3 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.360e-37 Identity = 75/87 (86.21%), Postives = 78/87 (89.66%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVKSSVCDIPP GL MA TFIGNS+SIQEMFRR + TAMFRRKAFLHWYT EGMDEMEFTE ESNMNDLVSEYQQYQDA+A Sbjct: 140 WIPNNVKSSVCDIPPVGLKMACTFIGNSSSIQEMFRRDATSLTAMFRRKAFLHWYTWEGMDEMEFTEEESNMNDLVSEYQQYQDASA 226
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_ASPFU (Tubulin beta chain OS=Aspergillus fumigatus GN=AFUA_7G00250 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.776e-37 Identity = 67/86 (77.91%), Postives = 83/86 (96.51%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C +PP+GL M++TF+GNSTS+QE+F+RV+ QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ+A+ Sbjct: 344 WIPNNVQTALCSVPPKGLKMSATFVGNSTSVQELFQRVATQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLMSEYQQYQEAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_COPC7 (Tubulin beta chain OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_04743 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.319e-37 Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV ++ CDIPPRGL MA TF+GNST+IQE+F+RVS+QFTAMF+RKAFLHWYT EGMDEMEFTEAESNM DLV+EYQQYQDAT Sbjct: 344 WIPNNVLTAQCDIPPRGLKMAVTFLGNSTAIQELFKRVSDQFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLVAEYQQYQDAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_USTMA (Tubulin beta chain OS=Ustilago maydis GN=UM05828 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.166e-37 Identity = 67/87 (77.01%), Postives = 83/87 (95.40%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNV+++ CDIPPRGL M+ TFIGNST+IQ++F+R++EQF+AMF+RKAFLHWYTGEGMDEMEFTEAESN+ DL++EYQQYQDA+A Sbjct: 344 WIPNNVQTAQCDIPPRGLKMSVTFIGNSTAIQDVFKRIAEQFSAMFKRKAFLHWYTGEGMDEMEFTEAESNLQDLIAEYQQYQDASA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_CANAL (Tubulin beta chain OS=Candida albicans GN=TUB2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.812e-37 Identity = 68/86 (79.07%), Postives = 81/86 (94.19%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV+++VC +PP+ L M++TFIGNSTSIQE+F+RV +QF+AMFRRKAFLHWYT EGMDEMEFTEAESNMNDLVSEYQQYQ+A+ Sbjct: 344 WIPNNVQTAVCSVPPKDLDMSATFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVSEYQQYQEAS 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB4Q_HUMAN (Putative tubulin beta-4q chain OS=Homo sapiens GN=TUBB4Q PE=5 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.812e-37 Identity = 71/87 (81.61%), Postives = 81/87 (93.10%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 W+PNN+K++VCDIPP GL M+ TF GN+T++QE+ +RVSEQFTA FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 344 WLPNNIKTAVCDIPPWGLKMSVTFTGNNTAVQEL-KRVSEQFTATFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB1_SUIBO (Tubulin beta-1 chain OS=Suillus bovinus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.151e-36 Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV S+ CDIPPRG+ MA TF+GNST+IQE+F+RVS+ FTAMF+RKAFLHWYT EGMDEMEFTEAESNM DL++EYQQYQDAT Sbjct: 344 WIPNNVLSAQCDIPPRGVKMAVTFLGNSTAIQELFKRVSDHFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLIAEYQQYQDAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_SCHCO (Tubulin beta chain OS=Schizophyllum commune GN=TUB-2 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.564e-36 Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV +S CDI PRGL M+ TF+GNST+IQE+F+RVS+QFTAMF+RKAFLHWYT EGMDEMEFTEAESNM DLV+EYQQYQDAT Sbjct: 344 WIPNNVLASQCDIAPRGLRMSVTFLGNSTAIQELFKRVSDQFTAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLVAEYQQYQDAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_PLESA (Tubulin beta chain OS=Pleurotus sajor-caju PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.564e-36 Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNV ++ CDIPPRG MA TF+GNST+IQE+F+RV++QF AMF+RKAFLHWYT EGMDEMEFTEAESNM DLV+EYQQYQDATA Sbjct: 344 WIPNNVLTAQCDIPPRGCKMAVTFLGNSTAIQELFKRVNDQFAAMFKRKAFLHWYTQEGMDEMEFTEAESNMQDLVAEYQQYQDATA 430 The following BLAST results are available for this feature:
BLAST of DN617298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617298 ID=DN617298; Name=DN617298; organism=Citrus sinensis; type=EST; length=696bpback to top |