DN617287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_HELPY (Thioredoxin reductase OS=Helicobacter pylori GN=trxB PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 76/199 (38.19%), Postives = 108/199 (54.27%), Query Frame = 3 Query: 123 IIGSGPXXXXXXXXXXXXELK-PILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVI 713 IIG GP +K +LFE M PGGQ+T +S++EN+PG + + G D M + Q RFG + V +V K F + D K+ A +VI+ATG K+ G +W +G+S CA CDG +++K +AV+GGGD+A+EEA +L KVY+IHRRD FR + I A N KI+ + Sbjct: 6 IIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGF--FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFL 197
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_HELPJ (Thioredoxin reductase OS=Helicobacter pylori J99 GN=trxB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.218e-30 Identity = 75/199 (37.69%), Postives = 108/199 (54.27%), Query Frame = 3 Query: 123 IIGSGPXXXXXXXXXXXXELK-PILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVI 713 IIG GP +K +LFE M PGGQ+T +S++EN+PG + + G D M + Q RFG + + +V K F + D K+ A +VI+ATG K+ G +W +G+S CA CDG +++K +AV+GGGD+A+EEA +L KVY+IHRRD FR + I A N KI+ + Sbjct: 6 IIGGGPAGLSAGLYATRGGVKNAVLFEKGM-----PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTAIQRVSKKGSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGF--FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNSKIEFL 197
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_TREPA (Thioredoxin reductase OS=Treponema pallidum GN=trxB PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 74/201 (36.82%), Postives = 109/201 (54.23%), Query Frame = 3 Query: 117 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 V I+G+G L+ ++ E A GGQ +EN+PG+ I G + + + Q++ FG QI E V+ + + F + T + + A +VI+ATGA +K+ PG F RG+S CA CDG P FR+K + VIGGGD+A +E+ L++ +V +IHRRD+ RA K + R L NP I V WN Sbjct: 7 VIIVGAGAAGLSAAQYACRANLRTLVIESK-----AHGGQALLIDSLENYPGYATPISGFEYAENMKKQAVAFGAQIAYEEVTTIGKRDSVFHITTGTGAYTAMSVILATGAEHRKMGIPGESEFLGRGVSYCATCDG--PFFRNKHVVVIGGGDAACDESLVLSRLTDRVTMIHRRDTLRAQKAIAERTLKNPHIAVQWN 200
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_CLOLI (Thioredoxin reductase OS=Clostridium litorale GN=trxB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.453e-30 Identity = 79/202 (39.11%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 117 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 + IIGSGP ++K +L EG GGQ+ T +V N+PG G L+ R Q FG + + + VDF + KV +K A VIVATGA K PG +G+S CA CD A F D + VIGGGD+A+EEA FLTK+ KV I+HRR RA+K +Q +A N K++ +WN Sbjct: 7 IAIIGSGPAGLAAALYGARAKMKTLLLEGMKV-----GGQIVITHEVANYPGSVPEATGPSLIGRMEEQVEEFGAERVMDNIVDVDFTDK-IKVLKGAKGEYKAKAVIVATGASPKLAGCPGEKELTGKGVSYCATCD--ADFFEDMEVFVIGGGDTAVEEAMFLTKFARKVTIVHRRAELRAAKSIQEKAFKNEKLNFMWN 200
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_MYCPN (Thioredoxin reductase OS=Mycoplasma pneumoniae GN=trxB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.805e-25 Identity = 68/197 (34.52%), Postives = 107/197 (54.31%), Query Frame = 3 Query: 117 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKI 704 V I+G+GP L + EG PGG++ T+ VEN+PG+ + I G DL N + F + K+D + F ++ D K+V+ A TVI ATG + +KL D F+ +GIS CA+CDG+ +++D+ + V+GGG+SA++EA +L V++IHRR+ FRA + N+ P + Sbjct: 18 VAIVGAGPAGIAAGIYGKRANLNLAIIEG-----STPGGKVVKTNIVENYPGY-KSITGPDLGLEMYNHLIDLEPTFFYANLIKLDKAADTFILYLDDKTVVFAKTVIYATGMLERKLGVAKEDHFYGKGISYCAICDGS--LYKDQVVGVVGGGNSAIQEALYLASMAKTVHLIHRREGFRADETALNKLRNLPNV 206
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_MYCGE (Thioredoxin reductase OS=Mycoplasma genitalium GN=trxB PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 65/185 (35.14%), Postives = 103/185 (55.68%), Query Frame = 3 Query: 123 IIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKS-VLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIM 674 I+G+GP L + EG PGG++ T+ VEN+PGF + I G +L N L F +F + K+D + F ++ D+K+ V + TVI ATG +KL D F+ +GIS CA+CD A +++ K + V+GGG+SA++EA +L+ V++IHRR+ FR+ ++ Sbjct: 20 IVGAGPAGIASAIYGKRANLNLAIIEG-----NTPGGKIVKTNIVENYPGF-KTITGPELGLEMYNHLLAFEPVVFYNNLIKIDHLNDTFILYLDNKTTVFSKTVIYATGMEERKLGIEKEDYFYGKGISYCAICDAA--LYKGKTVGVVGGGNSAIQEAIYLSSIAKTVHLIHRREVFRSDALL 196
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_UREPA (Thioredoxin reductase OS=Ureaplasma parvum GN=trxB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 64/199 (32.16%), Postives = 104/199 (52.26%), Query Frame = 3 Query: 123 IIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 IIG+GP L I+ E PGG++ TS+VEN+ G I G +L + Q L I E ++ K + K+ +++++ TVI+ATG ++L G F N+GIS CA+CDG P++++K ++VIG G+SA+EEA +L +V++I + F+A + + A P I + +N Sbjct: 10 IIGAGPAGLAAAVYAKRSGLNVIIVEKQF-----PGGKIALTSNVENYLGI-NSIPGPELAYKMYEQVLNLNVSIIYEAADEISLKEKYKKIKLTTQTLITKTVIIATGTENRRLNILGELEFENKGISYCAICDG--PLYKNKAVSVIGSGNSAVEEAIYLATIAKEVHLIANKPQFKAEQQLVQIANNTPNIKIYYN 200
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_MYCPU (Thioredoxin reductase OS=Mycoplasma pulmonis GN=trxB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.223e-22 Identity = 70/204 (34.31%), Postives = 106/204 (51.96%), Query Frame = 3 Query: 117 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQI-FTETVSKVDFKSRPFK-VFTDSKSVLADTVIVATGAVAKK-LQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 V IIG+GP L + + + APGG+L S +EN+PG + G DL R + FG + + + V ++ K + V D K + A +VI+A+G V++K + D F NRG+S C +CDG P++ P +IGGG+SA+EE FL+ SKVY+I R F A K + N + I+V++N Sbjct: 9 VAIIGAGPGALTAAIYTSRGNLDTVFID-----NAAPGGKLIYASKIENWPG-DTIVKGTDLAIRFFEHAQAFGAKYEYGKVVDLINIKDDLKELVLEDGKKIQAKSVIIASGMVSRKPREILNYDEFENRGVSYCVICDG--PMYGHNPAIIIGGGNSAVEEGTFLSSIASKVYVIVRDSDFIAEKALVNDLKSRKNIEVLFN 204
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: TRXB_AQUAE (Thioredoxin reductase OS=Aquifex aeolicus GN=trxB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.903e-22 Identity = 62/175 (35.43%), Postives = 92/175 (52.57%), Query Frame = 3 Query: 117 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFT-DSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYII 638 V IIG+GP K ++ A+ G L T +EN+PG P + G +L+ R Q+ FG + V D S P KV+T D + T+IVA+GA+ + +F G + F RG+S C VCD A F+D+P+AVIG D A+EEA F+ ++ +KV+ + Sbjct: 15 VIIIGAGPAGTTAAIYTARAGWKTLVLYRAEAD-----GALGVTQKIENYPGVPGPLSGYELLKIMREQAKSFGAEFVRGKVIATDLNSDPKKVYTIDGREFRGKTIIVASGAMERANKFKGEEEFLGRGVSYCGVCDAA--FFKDQPVAVIGDDDYAIEEAEFIARFANKVFFV 182
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: R34K_CLOPA (34.2 kDa protein in rubredoxin operon OS=Clostridium pasteurianum PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22 Identity = 63/200 (31.50%), Postives = 98/200 (49.00%), Query Frame = 3 Query: 123 IIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFT-ETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 IIG+GP +L ++ E + GGQ+ T VENFPGF I G DL D+ + G I + K+ + T+ +I+ATGA +++L P + + I C +CDGA +++ K L V+GGG+SA+E A FLTKY + I+H+ D +A K Q+ + + +IW+ Sbjct: 11 IIGAGPAGLTAAIYAIRAKLNTLVLENELV-----GGQIRETYTVENFPGF-NVISGADLADKMEEHAASIGVNIDQFSNIEKIKLSDDEKIIETEDVIYKVKALIIATGAKSRRLPIPEEEKLHGKVIHYCELCDGA--LYQGKDLVVVGGGNSAVEAAIFLTKYARNITIVHQFDYLQAQKYSQDELFKHKNVKIIWD 202 The following BLAST results are available for this feature:
BLAST of DN617287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617287 ID=DN617287; Name=DN617287; organism=Citrus sinensis; type=EST; length=720bpback to top |