DN617287
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: DHNA_BACSU (NADH dehydrogenase OS=Bacillus subtilis GN=ahpF PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12 Identity = 49/165 (29.70%), Postives = 82/165 (49.70%), Query Frame = 3 Query: 228 GGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 GGQ+ T +ENF + G L + + +K K F++ ++ +VL + TVI++TGA + + PG F N+G++ C CDG P+F K +AVIGGG+S +E A L + V ++ +A +++Q R + P + V+ N Sbjct: 242 GGQVLDTMSIENFISV-KATEGPKLAASLEEHVKEYDIDVMNLQRAKRLEKKDLFELELENGAVLKSKTVILSTGARWRNVNVPGEQEFKNKGVAYCPHCDG--PLFEGKDVAVIGGGNSGIEAAIDLAGIVNHVTVLEFAPELKADEVLQKRLYSLPNVTVVKN 403
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: AHPF_ECOLI (Alkyl hydroperoxide reductase subunit F OS=Escherichia coli (strain K12) GN=ahpF PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12 Identity = 58/206 (28.16%), Postives = 100/206 (48.54%), Query Frame = 3 Query: 117 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIF-TETVSKV---DFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 V I+GSGP ++ G M GGQ+ T D+EN+ P+ G L + + + +++ SK+ + ++ T S +VL A ++IVATGA + + PG D + +G++ C CDG P+F+ K +AVIGGG+S +E A L V ++ +A +++Q++ + +D+I N Sbjct: 215 VLIVGSGPAGAAAAIYSARKGIRT----GLMGERF--GGQILDTVDIENYISVPK-TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDG--PLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILN 411
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: AHPF_SALTY (Alkyl hydroperoxide reductase subunit F OS=Salmonella typhimurium GN=ahpF PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12 Identity = 57/206 (27.67%), Postives = 100/206 (48.54%), Query Frame = 3 Query: 117 VCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIF-TETVSKV---DFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 V I+GSGP ++ G M GGQ+ T D+EN+ P+ G L + + + +++ SK+ + ++ T S +VL A ++I+ATGA + + PG D + +G++ C CDG P+F+ K +AVIGGG+S +E A L V ++ +A +++Q++ + +D+I N Sbjct: 215 VLIVGSGPAGAAAAVYSARKGIRT----GLMGERF--GGQVLDTVDIENYISVPK-TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDG--PLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLKNVDIILN 411
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: AHPF_XANCH (Alkyl hydroperoxide reductase subunit F OS=Xanthomonas campestris pv. phaseoli GN=ahpF PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12 Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 228 GGQLTTTSDVENFPGFPQGILGGDLMDRCRNQSLR-FGTQIFT----ETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQN--RALTNPKI 704 GGQ+ T +ENF P+ G M Q +R + I E + + S+ + TVI++TGA +++ PG D + N+G++ C CDG P+F+ K +AVIGGG+S +E A L + V ++ D RA +++Q R+L N +I Sbjct: 246 GGQVLDTMSIENFISVPE--TEGPKMAAALEQHVRQYDVDIMNLQRAEQLIPAGADGLIEIKLANGASLKSKTVILSTGARWRQMNVPGEDQYKNKGVAYCPHCDG--PLFKGKRVAVIGGGNSGVEAAIDLAGIVAHVTLVEFDDKLRADEVLQRKLRSLHNVRI 407
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: AHPF_PSEPU (Alkyl hydroperoxide reductase subunit F OS=Pseudomonas putida GN=ahpF PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 414 SVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVI 713 S+ A TVI+ATGA +++ PG + RG++ C CDG P+F+ K +AVIGGG+S +E A L ++V +I RA ++Q + + P ++VI Sbjct: 310 SLKAKTVILATGARWREMNVPGEQEYRGRGVAYCPHCDG--PLFKGKRVAVIGGGNSGVEAAIDLAGIVAQVTLIEFDSQLRADAVLQRKLRSLPNVNVI 407
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: AHPF_PSEPK (Alkyl hydroperoxide reductase subunit F OS=Pseudomonas putida (strain KT2440) GN=ahpF PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 414 SVLADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVI 713 S+ A TVI+ATGA +++ PG + RG++ C CDG P+F+ K +AVIGGG+S +E A L ++V +I RA ++Q + + P ++VI Sbjct: 310 SLKAKTVILATGARWREMNVPGEQEYRGRGVAYCPHCDG--PLFKGKRVAVIGGGNSGVEAAIDLAGIVAQVTLIEFDSQLRADAVLQRKLRSLPNVNVI 407
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: FENR1_GRAFK (Ferredoxin--NADP reductase 1 OS=Gramella forsetii (strain KT0803) GN=GFO_0125 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 59/198 (29.80%), Postives = 91/198 (45.96%), Query Frame = 3 Query: 105 LKTKVCIIGSGPXXXXXXXXXXXXELKPILFEGWMANDIAPGGQLTTT---SDVENFPGFPQGILGGDLMDRCRNQSLRFGTQIF----TETVSKVDFKSRPFKVFTDSKSVLADTVIVATGAVA----KKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRAS 665 +KT + IIG+GP +LK L + PGGQ + + + PGFP+ +L GDL+D Q F ET+ K + S F V T + V+V G + +K P + N+G+ A + D ++RDK + + GGGDSA++ + FL S+V ++HRR FR + Sbjct: 2 IKTDILIIGAGPTGLFAVFEAGLLKLKCHLIDALPQ----PGGQCSEIYPKKPIYDIPGFPE-VLAGDLVDNLMEQIKPFEPGFTLGERAETIDKQEDGS--FIVTTSQGAKHHAPVVVIAGGLGSFEPRKPPIPSIKEYENKGV-AYIIRD--PEVYRDKKVVIAGGGDSALDWSIFLADVASEVSLVHRRKDFRGA 189
BLAST of DN617287 vs. ExPASy Swiss-Prot
Match: DHNA_BACYN (NADH dehydrogenase OS=Bacillus sp. (strain YN-1) GN=ahpF PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 3 Query: 228 GGQLTTTSDVENFPG--FPQGI-LGGDLMDRCRNQSLRFGTQIFTETVSKVDFKSRPFKVFTDSKSVL-ADTVIVATGAVAKKLQFPGSDAFWNRGISACAVCDGAAPIFRDKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDSFRASKIMQNRALTNPKIDVIWN 719 GGQ+ T +ENF + +G L L + + + + + K D ++ ++ +VL + +VI++TGA + + PG F N+G++ C CDG P+F K +AVIGGG+S +E A L + V ++ +A +++Q R + P + VI N Sbjct: 242 GGQIMDTLSIENFISQKYTEGPKLAASLEEHVKEYDIDVMKLQRAKRLEKKDL----IEIELENGAVLKSKSVILSTGARWRNVGVPGEQEFKNKGVAYCPHCDG--PLFEGKDVAVIGGGNSGVEAAIDLAGIVNHVTVLEFMPELKADEVLQERLNSLPNVTVIKN 403 The following BLAST results are available for this feature:
BLAST of DN617287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617287 ID=DN617287; Name=DN617287; organism=Citrus sinensis; type=EST; length=720bpback to top |