CX044428

Overview
NameCX044428
Unique NameCX044428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.053e-25
Identity = 69/204 (33.82%), Postives = 109/204 (53.43%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILT---KSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRD 608
            +GLSGG+KRR+SI  +M++ P ++FLDEPT+GLD+ +++ V+  + KL + D     RT I SIHQP S++  L   +C+LS G  VY         +F   G+  P L NP+D+F+   + D + D E+       TQ  ++ L      Y+ +   LQ  S ++   + Q    ++  +T   F  Q  VLT R+F   + D
Sbjct:  184 RGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKED----GRTFIMSIHQPRSDILFLLDQVCILSKGNVVYCDKMDNTIPYFESIGYHVPQLVNPADYFIDLSSVDSRSDKEE-----AATQSRLNSLIDHWHDYERTHLQLQAESYISNATEIQ----IQNMTTRLPFWKQVTVLTRRNFKLNFSD 374          

HSP 2 Score: 97.8265 bits (242), Expect = 5.128e-20
Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLS-SGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQED 386
            KG+SGG+KRRV++ +++L  P +L LDEPTSGLDS  S  ++  + KL  R+ G   +TII +IHQP SE+F+ F N+ LL+ SG+T + G       +F   G+ CP+  N +D FL  I+ + Q +
Sbjct:  837 KGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKL-CREQG---KTIIITIHQPRSELFKRFGNVLLLAKSGRTAFNGSPDEMIAYFTELGYNCPSFTNVADFFLDLISVNTQNE 960          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.053e-25
Identity = 76/232 (32.76%), Postives = 127/232 (54.74%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF------QEDIEKGLAGVVPTQE---AIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKST-------HADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653
            +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+LF +L LL+SG+ ++ GPA  A  +F   G+ C    NP+D FL  IN D       +E+  K    + P++     ++ L + Y  S  Y + ++++ ++     SG  +KK T          F  Q   ++ RSF N+  +      ++ V V+LG
Sbjct:  184 RGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKRDKPLVEKLAEIYVDSSFYKETKAELHQL-----SGGEKKKITVFKEISYTTSFCHQLRWVSKRSFKNLLGNPQASIAQIIVTVILG 405          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.030e-25
Identity = 71/211 (33.65%), Postives = 115/211 (54.50%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKD------FQEDIEKGLAGVVPTQE----AIDILTKSYKSSDSYLQVRSQVAEIC---KAQDSGALEKKSTHADFLTQCIVLTSRSFVNM 599
            +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+LF +L LL+SG+ ++ GPA  A  +FA  G+ C    NP+D FL  IN D       + D ++G        E     ID L   Y +S  +   + ++ +     K + S   ++ +    F  Q   ++ RSF N+
Sbjct:  184 RGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAREALGYFASIGYNCEPYNNPADFFLDVINGDSSAVVLSRADRDEGAQEPEEPPEKDTPLIDKLAAFYTNSSFFKDTKVELDQFSGGRKKKKSSVYKEVTYTTSFCHQLRWISRRSFKNL 389          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.179e-24
Identity = 79/229 (34.50%), Postives = 128/229 (55.90%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF------QEDI-EKGLAGVVPTQE---AIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALE--KKSTHA-DFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653
            +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+LF +L LL+SG+ ++ GPA  A  +F   GF C    NP+D FL  IN D       +EDI ++      P+++    I+ L + Y +S  + + + ++ +    Q    L   K+ T+A  F  Q   ++ RSF N+  +      +L V V LG
Sbjct:  183 RGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFGAIGFRCEPYNNPADFFLDIINGDSSAVVLNREDIGDEANETEEPSKKDTPLIEKLAEFYVNSSFFKETKVELDKFSGDQRRKKLPSYKEVTYATSFCHQLKWISRRSFKNLLGNPQASIAQLIVTVFLG 406          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.431e-24
Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTIN 368
            +G+SGG+K+RVSI  EML  P LL LDEPTSGLDS  ++ +++ I +L       G RT++T+IHQPSS ++ +F  + LLS G  +Y+G AS+A E+F+  GF      NP+D  L   N
Sbjct:  202 RGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLAS-----GGRTVVTTIHQPSSRIYHMFDKVVLLSEGSPIYYGAASSAVEYFSSLGFSTSLTVNPADLLLDLAN 317          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.853e-24
Identity = 65/210 (30.95%), Postives = 111/210 (52.86%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL---QVRSQVAEICKAQ-----DSGALEKKSTHADFLTQCIVLTSRSFVNMYRDL 611
            +GLSGG++RRVSI +++L  P +L LDEPTSGLDS  ++ ++  +++L +     G+R ++ S+HQP S++F+LF  + L++SG  +Y G A    ++F   G+PCP   NP+D ++   + D +   E+ LA     Q    +  +  +  D +L   + +    + C        D+  L   +     + Q   L  R   N +RDL
Sbjct:  211 RGLSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAK-----GNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQHMVQYFTAIGYPCPRYSNPADFYVDLTSID-RRSREQELATREKAQSLAALFLEKVRDLDDFLWKAETKDLDEDTCVESSVTPLDTNCLPSPTKMPGAVQQFTTLIRRQISNDFRDL 414          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.304e-23
Identity = 71/215 (33.02%), Postives = 117/215 (54.42%), Query Frame = 3
Query:   12 LSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEK-KSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653
            LSGGQ++R++I +E++  P ++F DEPTSGLDSA+ + V+S +  L Q     G R+I+ +IHQPS+++F+LF  L +LS GQ VY G  S    +    G  CPT  NP+D  ++  + ++ +   + +  V       D        +D    +  + AE    +DS ++E   S  A  LTQ  +L  R+F+++ RD      R+  ++ +G
Sbjct:  217 LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQ-----GGRSIVCTIHQPSAKLFELFDQLYVLSQGQCVYRGKVSNLVPYLRDLGLNCPTYHNPADFVMEVASGEYGDQNSRLVRAVREGMCDADYKRDLGGDTDVNPFLWHRPAE----EDSASMEGCHSFSASCLTQFCILFKRTFLSIMRDSVLTHLRITSHIGIG 422          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23
Identity = 68/216 (31.48%), Postives = 117/216 (54.17%), Query Frame = 3
Query:   12 LSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICK--AQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653
            LSGGQ++R++I +E++  P ++F DEPTSGLDSA+ + V+S +  L Q     G RTII +IHQPS+++F++F  L +LS GQ ++ G  +    +    G  CPT  NP+D  ++  + ++  D+   L   V  Q  +  + +   S +     +++V   C     +   +E  +     LTQ  +L  R+F+++ RD      R   +V++G
Sbjct:  201 LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQ-----GGRTIICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVASGEY-GDLNPMLFRAV--QNGLCAMAEKKSSPE-----KNEVPAPCPPCPPEVDPIESHTFATSTLTQFCILFKRTFLSILRDTVLTHLRFMSHVVIG 403          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCGM_DICDI (ABC transporter G family member 22 OS=Dictyostelium discoideum GN=abcG22 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.794e-23
Identity = 75/216 (34.72%), Postives = 117/216 (54.17%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653
            +GLSGG+KRRVSI   ++T P ++ LDEPTSGLD+ ++  VM  + +L Q+     S T+I +IHQP SE+F+LF  + +L+ G+ VY+G  +   E F   GFP P   NP+D+ L  +    +E    G A  +  +     L ++ + S S L  +SQ+  I     SG  +  + +    TQ +VL  R+ ++  R+      R  V V +G
Sbjct:  176 RGLSGGEKRRVSIGCGLVTSPSIVLLDEPTSGLDTTSAMAVMKTLVELTQQK----SVTVICTIHQPRSEIFKLFTKIMVLAEGRLVYYG--NRPVEHFTEIGFPFPDQTNPADYILDAVTTIKEE----GRADEIADRLQSSYLDQANQESSSTL-TQSQLGII---NASGKRKINAYNNGLFTQFLVLWKRTGLDFIRNPSNCLVRFAVAVFVG 377          
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.955e-23
Identity = 54/156 (34.62%), Postives = 95/156 (60.90%), Query Frame = 3
Query:    6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 473
            +G+SGG++RRVSI +++L  P +L LDEPTSGLDS  ++ +++ +++L +     G+R ++ S+HQP S++F+LF  + L++SG  +Y G A    ++F   G PCP   NP+D ++   + D +   E+ +A V   Q    +  +  +  D +L
Sbjct:  212 RGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAK-----GNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQQMVQYFTSIGHPCPRYSNPADFYVDLTSID-RRSKEREVATVEKAQSLAALFLEKVQGFDDFL 361          
The following BLAST results are available for this feature:
BLAST of CX044428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
YO075_YEAST4.053e-2533.82Uncharacterized ABC transporter ATP-binding protei... [more]
ABCG2_MACMU4.053e-2532.76ATP-binding cassette sub-family G member 2 OS=Maca... [more]
ABCG2_PIG9.030e-2533.65ATP-binding cassette sub-family G member 2 OS=Sus ... [more]
ABCG2_BOVIN1.179e-2434.50ATP-binding cassette sub-family G member 2 OS=Bos ... [more]
AB14G_ARATH3.431e-2446.28ABC transporter G family member 14 OS=Arabidopsis ... [more]
ABCG8_HUMAN5.853e-2430.95ATP-binding cassette sub-family G member 8 OS=Homo... [more]
ABCG1_MOUSE1.304e-2333.02ATP-binding cassette sub-family G member 1 OS=Mus ... [more]
ABCG4_HUMAN2.905e-2331.48ATP-binding cassette sub-family G member 4 OS=Homo... [more]
ABCGM_DICDI3.794e-2334.72ABC transporter G family member 22 OS=Dictyosteliu... [more]
ABCG8_MOUSE4.955e-2334.62ATP-binding cassette sub-family G member 8 OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_17E04_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-17E04-J7-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044428 ID=CX044428; Name=CX044428; organism=Citrus sinensis; type=EST; length=654bp
GAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAGTTAGCATTTGCATT
GAAATGTTGACTCGACCAAAGCTTCTATTTCTTGACGAGCCAACAAGCGG
ACTTGATAGTGCTGCTTCATACTATGTAATGAGCAGGATTGCTAAGCTTG
ATCAAAGAGATCATGGAGTGGGATCAAGAACAATAATAACATCAATCCAT
CAACCTAGCAGCGAAGTTTTTCAGCTTTTTCACAACCTTTGCCTTCTTTC
TTCCGGTCAAACTGTCTATTTTGGTCCAGCTTCTGCGGCAAATGAGTTTT
TTGCTTTGAATGGCTTCCCTTGCCCAACCCTCCAGAATCCATCTGATCAC
TTTCTTAAAACTATAAACAAAGATTTCCAGGAGGATATCGAAAAAGGTTT
AGCTGGAGTAGTACCGACCCAGGAAGCAATTGATATTCTTACAAAATCTT
ATAAATCCTCTGACAGCTATCTGCAAGTGCGAAGCCAGGTGGCTGAAATA
TGCAAGGCACAGGATTCTGGAGCTCTGGAGAAAAAGAGTACCCATGCTGA
CTTTCTCACTCAATGCATAGTTCTCACAAGCAGATCTTTTGTGAACATGT
ATCGTGATCTAGGTTACTACTGGTTTCGCCTAGGTGTTTATGTCTTACTG
GGAG
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