CX044428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.053e-25 Identity = 69/204 (33.82%), Postives = 109/204 (53.43%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILT---KSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRD 608 +GLSGG+KRR+SI +M++ P ++FLDEPT+GLD+ +++ V+ + KL + D RT I SIHQP S++ L +C+LS G VY +F G+ P L NP+D+F+ + D + D E+ TQ ++ L Y+ + LQ S ++ + Q ++ +T F Q VLT R+F + D Sbjct: 184 RGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKED----GRTFIMSIHQPRSDILFLLDQVCILSKGNVVYCDKMDNTIPYFESIGYHVPQLVNPADYFIDLSSVDSRSDKEE-----AATQSRLNSLIDHWHDYERTHLQLQAESYISNATEIQ----IQNMTTRLPFWKQVTVLTRRNFKLNFSD 374 HSP 2 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 55/128 (42.97%), Postives = 82/128 (64.06%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLS-SGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQED 386 KG+SGG+KRRV++ +++L P +L LDEPTSGLDS S ++ + KL R+ G +TII +IHQP SE+F+ F N+ LL+ SG+T + G +F G+ CP+ N +D FL I+ + Q + Sbjct: 837 KGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKL-CREQG---KTIIITIHQPRSELFKRFGNVLLLAKSGRTAFNGSPDEMIAYFTELGYNCPSFTNVADFFLDLISVNTQNE 960
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.053e-25 Identity = 76/232 (32.76%), Postives = 127/232 (54.74%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF------QEDIEKGLAGVVPTQE---AIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKST-------HADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653 +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ ++ GPA A +F G+ C NP+D FL IN D +E+ K + P++ ++ L + Y S Y + ++++ ++ SG +KK T F Q ++ RSF N+ + ++ V V+LG Sbjct: 184 RGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFESAGYHCEAYNNPADFFLDIINGDSTAVALNREEDFKATEIIEPSKRDKPLVEKLAEIYVDSSFYKETKAELHQL-----SGGEKKKITVFKEISYTTSFCHQLRWVSKRSFKNLLGNPQASIAQIIVTVILG 405
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_PIG (ATP-binding cassette sub-family G member 2 OS=Sus scrofa GN=ABCG2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.030e-25 Identity = 71/211 (33.65%), Postives = 115/211 (54.50%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKD------FQEDIEKGLAGVVPTQE----AIDILTKSYKSSDSYLQVRSQVAEIC---KAQDSGALEKKSTHADFLTQCIVLTSRSFVNM 599 +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ ++ GPA A +FA G+ C NP+D FL IN D + D ++G E ID L Y +S + + ++ + K + S ++ + F Q ++ RSF N+ Sbjct: 184 RGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAREALGYFASIGYNCEPYNNPADFFLDVINGDSSAVVLSRADRDEGAQEPEEPPEKDTPLIDKLAAFYTNSSFFKDTKVELDQFSGGRKKKKSSVYKEVTYTTSFCHQLRWISRRSFKNL 389
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.179e-24 Identity = 79/229 (34.50%), Postives = 128/229 (55.90%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDF------QEDI-EKGLAGVVPTQE---AIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALE--KKSTHA-DFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653 +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+LF +L LL+SG+ ++ GPA A +F GF C NP+D FL IN D +EDI ++ P+++ I+ L + Y +S + + + ++ + Q L K+ T+A F Q ++ RSF N+ + +L V V LG Sbjct: 183 RGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKLFDSLTLLASGRLMFHGPAQEALGYFGAIGFRCEPYNNPADFFLDIINGDSSAVVLNREDIGDEANETEEPSKKDTPLIEKLAEFYVNSSFFKETKVELDKFSGDQRRKKLPSYKEVTYATSFCHQLKWISRRSFKNLLGNPQASIAQLIVTVFLG 406
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.431e-24 Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTIN 368 +G+SGG+K+RVSI EML P LL LDEPTSGLDS ++ +++ I +L G RT++T+IHQPSS ++ +F + LLS G +Y+G AS+A E+F+ GF NP+D L N Sbjct: 202 RGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLAS-----GGRTVVTTIHQPSSRIYHMFDKVVLLSEGSPIYYGAASSAVEYFSSLGFSTSLTVNPADLLLDLAN 317
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.853e-24 Identity = 65/210 (30.95%), Postives = 111/210 (52.86%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL---QVRSQVAEICKAQ-----DSGALEKKSTHADFLTQCIVLTSRSFVNMYRDL 611 +GLSGG++RRVSI +++L P +L LDEPTSGLDS ++ ++ +++L + G+R ++ S+HQP S++F+LF + L++SG +Y G A ++F G+PCP NP+D ++ + D + E+ LA Q + + + D +L + + + C D+ L + + Q L R N +RDL Sbjct: 211 RGLSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAK-----GNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQHMVQYFTAIGYPCPRYSNPADFYVDLTSID-RRSREQELATREKAQSLAALFLEKVRDLDDFLWKAETKDLDEDTCVESSVTPLDTNCLPSPTKMPGAVQQFTTLIRRQISNDFRDL 414
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.304e-23 Identity = 71/215 (33.02%), Postives = 117/215 (54.42%), Query Frame = 3 Query: 12 LSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEK-KSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653 LSGGQ++R++I +E++ P ++F DEPTSGLDSA+ + V+S + L Q G R+I+ +IHQPS+++F+LF L +LS GQ VY G S + G CPT NP+D ++ + ++ + + + V D +D + + AE +DS ++E S A LTQ +L R+F+++ RD R+ ++ +G Sbjct: 217 LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQ-----GGRSIVCTIHQPSAKLFELFDQLYVLSQGQCVYRGKVSNLVPYLRDLGLNCPTYHNPADFVMEVASGEYGDQNSRLVRAVREGMCDADYKRDLGGDTDVNPFLWHRPAE----EDSASMEGCHSFSASCLTQFCILFKRTFLSIMRDSVLTHLRITSHIGIG 422
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 2.905e-23 Identity = 68/216 (31.48%), Postives = 117/216 (54.17%), Query Frame = 3 Query: 12 LSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICK--AQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653 LSGGQ++R++I +E++ P ++F DEPTSGLDSA+ + V+S + L Q G RTII +IHQPS+++F++F L +LS GQ ++ G + + G CPT NP+D ++ + ++ D+ L V Q + + + S + +++V C + +E + LTQ +L R+F+++ RD R +V++G Sbjct: 201 LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQ-----GGRTIICTIHQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVASGEY-GDLNPMLFRAV--QNGLCAMAEKKSSPE-----KNEVPAPCPPCPPEVDPIESHTFATSTLTQFCILFKRTFLSILRDTVLTHLRFMSHVVIG 403
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCGM_DICDI (ABC transporter G family member 22 OS=Dictyostelium discoideum GN=abcG22 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.794e-23 Identity = 75/216 (34.72%), Postives = 117/216 (54.17%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYLQVRSQVAEICKAQDSGALEKKSTHADFLTQCIVLTSRSFVNMYRDLGYYWFRLGVYVLLG 653 +GLSGG+KRRVSI ++T P ++ LDEPTSGLD+ ++ VM + +L Q+ S T+I +IHQP SE+F+LF + +L+ G+ VY+G + E F GFP P NP+D+ L + +E G A + + L ++ + S S L +SQ+ I SG + + + TQ +VL R+ ++ R+ R V V +G Sbjct: 176 RGLSGGEKRRVSIGCGLVTSPSIVLLDEPTSGLDTTSAMAVMKTLVELTQQK----SVTVICTIHQPRSEIFKLFTKIMVLAEGRLVYYG--NRPVEHFTEIGFPFPDQTNPADYILDAVTTIKEE----GRADEIADRLQSSYLDQANQESSSTL-TQSQLGII---NASGKRKINAYNNGLFTQFLVLWKRTGLDFIRNPSNCLVRFAVAVFVG 377
BLAST of CX044428 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.955e-23 Identity = 54/156 (34.62%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 6 KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIITSIHQPSSEVFQLFHNLCLLSSGQTVYFGPASAANEFFALNGFPCPTLQNPSDHFLKTINKDFQEDIEKGLAGVVPTQEAIDILTKSYKSSDSYL 473 +G+SGG++RRVSI +++L P +L LDEPTSGLDS ++ +++ +++L + G+R ++ S+HQP S++F+LF + L++SG +Y G A ++F G PCP NP+D ++ + D + E+ +A V Q + + + D +L Sbjct: 212 RGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAK-----GNRLVLISLHQPRSDIFRLFDLVLLMTSGTPIYLGAAQQMVQYFTSIGHPCPRYSNPADFYVDLTSID-RRSKEREVATVEKAQSLAALFLEKVQGFDDFL 361 The following BLAST results are available for this feature:
BLAST of CX044428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044428 ID=CX044428; Name=CX044428; organism=Citrus sinensis; type=EST; length=654bpback to top |