CX044419

Overview
NameCX044419
Unique NameCX044419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: ADHQ_RABIT (Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctolagus cuniculus GN=ADH2-2 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.520e-44
Identity = 99/247 (40.08%), Postives = 138/247 (55.87%), Query Frame = 2
Query:   98 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            T GK I+C+AAIA   G+PL I+EV V PP +HEVRV+II  S+C SD           + P ILGHE                     IP ++  C +C  C+S   N C+ F    +P + +    D+TSRF   +G++I+HF+ +S+FS+YTV+   ++ K+D      R CL+ CG STG GAA   A V  GST  +FGLG +GL+   G +  GA+RII VD+ S+KF   K  G T+ +N
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQIIAASVCRSDTYVINPAFKEGLLPVILGHECAGIVESVGPGVNNFKPGDKVIPLYVPHCRKCKFCQSPLTNFCTKFSEHKNPIIEQELMDDKTSRFT-CKGKSIYHFLGISAFSQYTVVKDINLAKIDDDANLKRVCLIGCGFSTGYGAAINDAKVTPGSTCAVFGLGGVGLSAVIGCKTAGASRIIAVDINSDKFAKAKALGATDCLN 248          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 5.904e-44
Identity = 101/247 (40.89%), Postives = 137/247 (55.47%), Query Frame = 2
Query:   98 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFP-FK---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            T GK I+C+AAIA   G PL I+E+ V PP + EVR+++I T +C +D+     K   A+FP +LGHE                     IP F   C  C  C S   NLC     FK   I   +  D+TSRF   +G +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ CG S+G GAA  TA V  GST  +FGLG +GL+   G ++ GA+RII +D+  EKF   K  G T+ +N
Sbjct:    3 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFT-CKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLN 247          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 5.904e-44
Identity = 102/247 (41.30%), Postives = 134/247 (54.25%), Query Frame = 2
Query:   98 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            TAGK I+C+AA+     +P  I+EV V PP +HEVR++++   +C SD          A  P I GHEA                    IP F+  C +C  C+  +GNLC       +  MPR    D TSRF   RG+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA RIIGVD+  +KF   K  G TE VN
Sbjct:    3 TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSD-DHVVSGTLVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLK-----NLSMPRGTMQDGTSRFT-CRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 7.710e-44
Identity = 100/247 (40.49%), Postives = 135/247 (54.66%), Query Frame = 2
Query:   98 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR----DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            T GK I+C+AAIA   G+PL I+EV V PP +HEVRV+I    LC SD      K   A  P ILGHE                     IP ++  C +C  C S   N C  F    +P + +    D+TSRF   +G++I+HF  +S+FS+YTV+   ++ K+D      R CL+ CG STG GAA  TA V  GST  +FGLG +GL+   G +  GA+RII +D+ S+KF   K  G T+ +N
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHEGAGIVESVGPGVTNVKPGDKVIPLYIPHCKKCKFCLSPLTNFCEKFCKGKNPLIEQELMEDKTSRFT-CKGKSIYHFFGISAFSQYTVVKDVNLAKIDDDANLERVCLIGCGFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSAIMGCKTAGASRIIAIDINSDKFAKAKALGATDCLN 248          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.007e-43
Identity = 97/244 (39.75%), Postives = 135/244 (55.33%), Query Frame = 2
Query:   95 KTAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            K     I+ RAA+A AP +PL I E+ V+ P   EV +R   T +CH+D       D   VFP +LGHE                     IP + A+C EC  CRS K NLC +        +  D T+RF   +G+ I+H++  S+FSEY+V+    + K++P     + CLL CGV+TG+GA   TA V+ G +V +FGLG+IGLAV +GAR   A RII +D    KFE+ K+FG T+ +N
Sbjct:    4 KQINSTIKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDAFTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVLSVKPGDHVIPLYTAECGECEFCRSGKTNLCVSVRDTQGKGLMPDCTTRFS-YQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQFGATDCLN 246          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 1.718e-43
Identity = 96/243 (39.51%), Postives = 132/243 (54.32%), Query Frame = 2
Query:   98 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            TAGK I C+AA+A  P +PL ++ + V PP +HEVR++I+ + +C SD +  K +  P+ FP ILGHEA+                   IP F+  C  C  C+S   N C          +  D TSRF   RG+ I++ V  S+F+EYTV+    V K+DP  P   +CL+ CG +TG GAA  TA V  GST  +FGLG +G +   G +  GA+RIIGV    +KF      G TE +N
Sbjct:    3 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLK-EIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT-CRGKPIYNLVGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLN 242          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 2.243e-43
Identity = 99/247 (40.08%), Postives = 136/247 (55.06%), Query Frame = 2
Query:   98 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFP-FK---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            T GK I C+AAIA     PL I+E+ V PP +HEVR+++I T +C +D+     K   A+FP +LGHE                     IP F   C +C  C S   NLC     FK   I   +  D+TSRF   +  +I+HF+ VSSFS+YTV+  A++ +VD      R CL+ CG ++G GAA  TA V  GS   +FGLG +GL+   G ++ GA+RII +D+ SEKF   K  G T+ +N
Sbjct:    3 TQGKVITCKAAIAWKTDSPLCIEEIEVSPPKAHEVRIKVIATCVCPTDINATNPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKKCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTS-KERSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFTSGYGAAINTAKVTPGSACAVFGLGCVGLSAVIGCKIAGASRIIAIDINSEKFPKAKALGATDCLN 247          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.930e-43
Identity = 96/238 (40.34%), Postives = 131/238 (55.04%), Query Frame = 2
Query:  113 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            ++ RAA+A  PG PL I E+ V PP   EV V+I  T +CH+D       D   +FP +LGHE                     IP + A+C EC  C S K NLC A        +  D TSRF  + G+ ++H++  S+FSEYTV+    + K++P     + CLL CGV+TG+GA   TA V+ G +V +FGLG IGLAV +GAR   A RI  +D    KFE+ K+FG T+ +N
Sbjct:    1 MKSRAAVAFGPGLPLEIVEIDVAPPKKGEVLVKISHTGVCHTDAYTLSGDDPEGLFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECDFCTSGKTNLCVAVRETQGKGVMPDATSRFF-VNGQPLYHYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFGATDCIN 237          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 2.930e-43
Identity = 95/244 (38.93%), Postives = 133/244 (54.51%), Query Frame = 2
Query:   98 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISP-WMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            TAGK I+C+AA+   P +P  I+++ V PP +HEVR++++ T +C SD        F  + P +LGHE                     IP F   C +C  C+  + NLC        P     D TSRF   RG+ IHHF+S S+FS+YTV+D   V K+D   P ++ CL+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA +II VD+  +KF   K  G T+ +N
Sbjct:    3 TAGKVIKCKAAVLWEPHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHAVSGSLFTPL-PAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFS-CRGKPIHHFISTSTFSQYTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVFGLGGVGLSVVIGCKTAGAAKIIAVDINKDKFAKAKELGATDCIN 244          
BLAST of CX044419 vs. ExPASy Swiss-Prot
Match: ADH1_RABIT (Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.930e-43
Identity = 96/243 (39.51%), Postives = 129/243 (53.09%), Query Frame = 2
Query:   98 TAGKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIXXXXXXXXXXXXXXXXXXXIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 826
            TAGK I+C+AA+     +P  I+EV V PP +HEVR++++ T +C SD             P ILGHEA                    IP F   C +C  C+  + N C          M  D TSRF   +G+ IHHF+  S+FS+YTV+D   V K+D   P  + CL+ CG STG G+A + A V  GST  +FGLG +GL+V  G +  GA+RII VD+  +KF   K  G TE +N
Sbjct:    3 TAGKVIKCKAAVLWQLNKPFSIEEVEVAPPKAHEVRIKMVATGICRSD-DHAVTGSIAVPLPVILGHEAAGIVESIGEGVTTVKPGDKVIPLFTPQCGKCRICKHPESNFCLINDLGKPKGMLLDGTSRFT-CKGKPIHHFIGTSTFSQYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFPKAKEVGATECIN 243          
The following BLAST results are available for this feature:
BLAST of CX044419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
ADHQ_RABIT4.520e-4440.08Alcohol dehydrogenase class-2 isozyme 2 OS=Oryctol... [more]
ADH4_MOUSE5.904e-4440.89Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADH1S_HORSE5.904e-4441.30Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADHP_RABIT7.710e-4440.49Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
FRMA_HAEIN1.007e-4339.75S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
ADH8_RANPE1.718e-4339.51NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADH4_RAT2.243e-4340.08Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
FRMA_PASPI2.930e-4340.34S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
ADH1_RAT2.930e-4338.93Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1_RABIT2.930e-4339.51Alcohol dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_17D11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-17D11-H21-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044419 ID=CX044419; Name=CX044419; organism=Citrus sinensis; type=EST; length=831bp
ACCAGCCACCCTCTACTCACTCACTTTTCTTACAGGAAAAAGCCAAAACA
ACTCTTAAACTATCTCCGGCATGGACATTGAGAAACCGTCGAATAAAACC
GCCGGGAAACCAATTCAATGCAGAGCCGCAATCGCTACAGCTCCAGGAGA
GCCTCTGGTTATAGACGAGGTTATCGTCGACCCTCCAAATTCCCACGAAG
TTCGGGTTCGGATAATCTGTACTAGTCTCTGTCACAGTGACGTCACCTTC
TGGAAAATGAAGGATTTTCCAGCCGTGTTTCCAAGAATTCTCGGTCACGA
GGCTATCGGAGTTGTGGAGAGTGTTGGGGAGAATGTAGATGGAGTGGTTG
AAGGAGACGTTGTCATCCCGCACTTTCTGGCAGATTGTACAGAATGTGTA
GGTTGTAGATCAAAGAAGGGCAACCTATGTTCAGCATTTCCTTTCAAGAT
CTCTCCTTGGATGCCAAGGGATCAGACAAGCAGATTCAAAGACCTCAGAG
GAGAGACTATACACCATTTTGTCTCTGTTTCAAGTTTTTCTGAGTATACT
GTTCTAGATATTGCCCATGTAGTCAAAGTTGATCCTACAGTCCCTCCAAA
TAGGGCTTGCCTTCTAAGCTGTGGAGTATCAACAGGCGTGGGAGCTGCTT
GGAGAACAGCAAATGTAGAGGTTGGATCAACTGTTGTTATATTTGGGCTT
GGTTCAATTGGATTAGCGGTTGCAGAGGGAGCGAGATTATGTGGTGCTAC
AAGGATTATAGGCGTGGATGTGATCTCGGAAAAATTTGAAATTGGAAAAA
GGTTTGGAGTTACAGAGTTTGTGAATTCTAA
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