CX044414

Overview
NameCX044414
Unique NameCX044414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAAT (Protein grpE OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAAS (Protein grpE OS=Staphylococcus aureus (strain MSSA476) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAAR (Protein grpE OS=Staphylococcus aureus (strain MRSA252) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAAN (Protein grpE OS=Staphylococcus aureus (strain N315) GN=grpE PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAAM (Protein grpE OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=grpE PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAAE (Protein grpE OS=Staphylococcus aureus (strain Newman) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAAC (Protein grpE OS=Staphylococcus aureus (strain COL) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAAB (Protein grpE OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAA9 (Protein grpE OS=Staphylococcus aureus (strain JH9) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
[Close]
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAA8 (Protein grpE OS=Staphylococcus aureus (strain NCTC 8325) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2 
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207
The following BLAST results are available for this feature:
BLAST of CX044414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 357
Match NameE-valueIdentityDescription
GRPE_STAAT9.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain USA3... [more]
GRPE_STAAS9.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain MSSA... [more]
GRPE_STAAR9.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain MRSA... [more]
GRPE_STAAN9.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain N315... [more]
GRPE_STAAM9.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain Mu50... [more]
GRPE_STAAE9.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain Newm... [more]
GRPE_STAAC9.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain COL)... [more]
GRPE_STAAB9.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain bovi... [more]
GRPE_STAA99.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain JH9)... [more]
GRPE_STAA89.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain NCTC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_17D09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-17D09-H17-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044414 ID=CX044414; Name=CX044414; organism=Citrus sinensis; type=EST; length=830bp
TTTTTTACCTATAAAAATTTCTCAATAAACTGTCAGGTAAAAATATAGCT
CAGGCAAAACATAGGTCCAGGAGCACAATAACACTACACAAAGGTTTGAC
AAAGAAAGGCTAAAATCAGCCAAATAAATGCTAATCCCTAGAGCCATTAT
GAATTCCTCTGTTGAAACAAGCAATAACAGTCTCAGTAATCACACCCCAT
GAGATTAAATCCTATAAGCAAAACTTTTAACATTATCATGGCTGTTGCTT
TTACAAAACTGAATCTAGGTATGTGTATCAAGAGGACTCCGCTTCAACTT
CTTCTGTGCTGCTATCTGCGGTTTCAACTACAGCTGCCTCTCCTTCTGAT
GGTTGTTCTTCTTTCGGTTTCGCAGGCCCTGGACCAGCCGATACCTTTAC
CATCGATGGACGTAGGAGCCTATCGCCAAGTTTGAACCCCTTGCGGAATT
CTTCAATAATCACACCTTCATCAAATTCTGTGGAATCCTCGCGCATAATT
GCTTCGTGAAGCAATGGATCAAAAGGATTCCCAACCGTCTCCACAGGAAC
AACACCAAGTGATCCTAGGATTTCCACTAATTGCTTATATATGCTCTGAT
AGCTGTTGTTTATTTTCTCCTCTCCCTCGGTCTGCACCTTAATTTGAGTT
TTAGCTCTCTCAAAATTATCCAAAACTTGCAACAATCTCTCCATGACTTC
TCCTTGAGCATTTGTTACCAGTGAAAGGCGTTCCTTCTCCGTTCTCTTAC
GAAAATTGTCAAAGTCAGCACTGATCCTAAGAATACGAGCCCTCTCAGCT
GACAATTCTTCAGACAAGTTAACAACTTTC
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