CX044414

Overview
NameCX044414
Unique NameCX044414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAA3 (Protein grpE OS=Staphylococcus aureus (strain USA300) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAA2 (Protein grpE OS=Staphylococcus aureus (strain JH1) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAA1 (Protein grpE OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 51/147 (34.69%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +       + LR+ A+F+N+++R +KE     T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  ++T G  FDP +H+A++++D+ +F+ G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 KINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERA-LQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVN 207          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_METTH (Protein grpE OS=Methanobacterium thermoautotrophicum GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 49/140 (35.00%), Postives = 85/140 (60.71%), Query Frame = -2
Query:  392 EELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKV 811
            EE+    + + R+ ADFDN++K+ EK+ L ++ NA   ++ +LL V ++ ERA        E ++   +  + IY++  + L   G+  +   G  FDP LHEA+M ED   +++G+IIEE  +G++L DR+++ S+VKV
Sbjct:   38 EEVREYTSHLQRLQADFDNYKKQMEKQELEIIKNANERLILKLLDVYEDLERA-------IENQDSSMDGLEVIYRKFRDTLTKEGLSEIPAEGEKFDPFLHEAVMVEDHDGYEDGIIIEELSRGYRLNDRIIKHSIVKV 170          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_CLOTE (Protein grpE OS=Clostridium tetani GN=grpE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.171e-21
Identity = 54/144 (37.50%), Postives = 90/144 (62.50%), Query Frame = -2
Query:  389 LSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 817
            L+ E+ A + R+LR + ++DN+RKRT++E+  L  +A  +V++ +L VLDN ERA     +  +G+ E +        KQ  +   +LGV  + T  N FDP LH+A+M  + +++ E  ++E F KG+K GD+++R SMVKV+
Sbjct:   62 LNNEMEALKDRLLRTTGEYDNYRKRTDREKEGLYASACEDVLKEILPVLDNLERA-----ILAKGDIEDLKKGVDMTLKQFKDSFKNLGVEEIST-ENGFDPNLHDAVMHVEDSQYGEKEVVEVFLKGYKKGDKIIRHSMVKVA 199          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_THETN (Protein grpE OS=Thermoanaerobacter tengcongensis GN=grpE PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.668e-20
Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = -2
Query:  389 RISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 778
            RI A+FDN+RKRTEKE+  +++  Q +V+  LL V+DNFERA     +  EG+   +    + IY+Q  ++L    V  +E  G  FDP  H A+ +E+        IIE F+KG+ L D+++RPS+VKV+
Sbjct:   78 RIKAEFDNYRKRTEKEKAEMISYGQEQVIIELLPVIDNFERA-----LANEGDYNSLREGLELIYRQFKKVLDKFEVREIEAEGQMFDPYKHHALAQEEVEGKQPNEIIEVFQKGYYLKDKVIRPSLVKVA 203          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAHJ (Protein grpE OS=Staphylococcus haemolyticus (strain JCSC1435) GN=grpE PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.668e-20
Identity = 50/147 (34.01%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            ++  L  + +    + LR+ A+F+N+++R +KE  +  T     V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  +E+ G  FDP  H+A++++D+ +F  G I +E +KG+KL DR+LRPSMVKV+
Sbjct:   62 EIQQLQLKANENEEKYLRLYAEFENYKRRIQKENETNKTYQSQRVLTDILPTIDNIERA-LQIEGDDESFKSLQKGVQMVHESLLRALKDNGLEEIESEGQAFDPNFHQAVVQDDNPDFKSGDITQELQKGYKLKDRVLRPSMVKVN 207          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_ALKOO (Protein grpE OS=Alkaliphilus oremlandii (strain OhILAs) GN=grpE PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.668e-20
Identity = 54/130 (41.54%), Postives = 81/130 (62.31%), Query Frame = -2
Query:  389 RISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 778
            R+ ADF N++KR EKE+  +   A  ++   LL ++DNFERA  Q   +TE  + +      +YKQL++ L   GV  +E +  PFD  LH A+M+E+S E     +I+  +KG+K+ DR+LRP+MVKVS
Sbjct:   59 RLQADFTNYKKRVEKEKGDIYLYANEKIALDLLNIIDNFERA-IQSTEKTEENDSLLQGISLVYKQLLDTLTKHGVEEIEAMEKPFDMNLHYAVMQEES-EGASNYVIDVLQKGYKIKDRILRPAMVKVS 186          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_CLOB8 (Protein grpE OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=grpE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.485e-20
Identity = 53/144 (36.81%), Postives = 87/144 (60.42%), Query Frame = -2
Query:  389 LSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGE-EKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 817
            L EEL A + R+LR++A++DN+RKRT KE+  + ++A  +V++ ++ +LDN ERA     V  +G  E +    +   K   +    LGV  ++  G  FDP LH A+M  +  E  + V+ E F+KG+K  D+++R +MVKV+
Sbjct:   69 LREELDATKDRLLRLTAEYDNYRKRTAKEKEGIYSDAYVDVLKEIVPILDNLERA-----VAADGSIEDLKKGIEMTIKGCKDSFAKLGVEEIDATGE-FDPNLHNAVMHIEDEELGKNVVAEVFQKGYKKDDKIIRHTMVKVA 206          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_CHLFF (Protein grpE OS=Chlamydophila felis (strain Fe/C-56) GN=grpE PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.485e-20
Identity = 50/159 (31.45%), Postives = 89/159 (55.97%), Query Frame = -2
Query:  353 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVSAGPGPAKPKEEQ 829
            ++  L  EL  +  + L + A+ +N RKR +KER  ++  A    +   L  +++ E+A       ++  +     +  I +Q  ++    G+V   +VG  F+P LHEA+  E++T+  EG+I+EEF KG+K+GDR +R + VKV+  P P + +EE+
Sbjct:   28 EIATLKAELKEKNDKYLMVLAESENARKRMQKERQEMMQYAVENALIDFLVPIESMEKALGFASQMSDEVKNWALGFNMILQQFKQVFEEKGIVEYSSVGQKFNPFLHEAVETEETTKVPEGIIVEEFAKGYKIGDRPIRVAKVKVAKSPAPQEKEEEK 186          
The following BLAST results are available for this feature:
BLAST of CX044414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 357
Match NameE-valueIdentityDescription
GRPE_STAA39.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain USA3... [more]
GRPE_STAA29.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain JH1)... [more]
GRPE_STAA19.171e-2134.69Protein grpE OS=Staphylococcus aureus (strain Mu3 ... [more]
GRPE_METTH9.171e-2135.00Protein grpE OS=Methanobacterium thermoautotrophic... [more]
GRPE_CLOTE9.171e-2137.50Protein grpE OS=Clostridium tetani GN=grpE PE=3 SV... [more]
GRPE_THETN2.668e-2040.46Protein grpE OS=Thermoanaerobacter tengcongensis G... [more]
GRPE_STAHJ2.668e-2034.01Protein grpE OS=Staphylococcus haemolyticus (strai... [more]
GRPE_ALKOO2.668e-2041.54Protein grpE OS=Alkaliphilus oremlandii (strain Oh... [more]
GRPE_CLOB83.485e-2036.81Protein grpE OS=Clostridium beijerinckii (strain A... [more]
GRPE_CHLFF3.485e-2031.45Protein grpE OS=Chlamydophila felis (strain Fe/C-5... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_17D09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-17D09-H17-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044414 ID=CX044414; Name=CX044414; organism=Citrus sinensis; type=EST; length=830bp
TTTTTTACCTATAAAAATTTCTCAATAAACTGTCAGGTAAAAATATAGCT
CAGGCAAAACATAGGTCCAGGAGCACAATAACACTACACAAAGGTTTGAC
AAAGAAAGGCTAAAATCAGCCAAATAAATGCTAATCCCTAGAGCCATTAT
GAATTCCTCTGTTGAAACAAGCAATAACAGTCTCAGTAATCACACCCCAT
GAGATTAAATCCTATAAGCAAAACTTTTAACATTATCATGGCTGTTGCTT
TTACAAAACTGAATCTAGGTATGTGTATCAAGAGGACTCCGCTTCAACTT
CTTCTGTGCTGCTATCTGCGGTTTCAACTACAGCTGCCTCTCCTTCTGAT
GGTTGTTCTTCTTTCGGTTTCGCAGGCCCTGGACCAGCCGATACCTTTAC
CATCGATGGACGTAGGAGCCTATCGCCAAGTTTGAACCCCTTGCGGAATT
CTTCAATAATCACACCTTCATCAAATTCTGTGGAATCCTCGCGCATAATT
GCTTCGTGAAGCAATGGATCAAAAGGATTCCCAACCGTCTCCACAGGAAC
AACACCAAGTGATCCTAGGATTTCCACTAATTGCTTATATATGCTCTGAT
AGCTGTTGTTTATTTTCTCCTCTCCCTCGGTCTGCACCTTAATTTGAGTT
TTAGCTCTCTCAAAATTATCCAAAACTTGCAACAATCTCTCCATGACTTC
TCCTTGAGCATTTGTTACCAGTGAAAGGCGTTCCTTCTCCGTTCTCTTAC
GAAAATTGTCAAAGTCAGCACTGATCCTAAGAATACGAGCCCTCTCAGCT
GACAATTCTTCAGACAAGTTAACAACTTTC
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