CX044414

Overview
NameCX044414
Unique NameCX044414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAES (Protein grpE OS=Staphylococcus epidermidis (strain ATCC 12228) GN=grpE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.014e-19
Identity = 52/148 (35.14%), Postives = 91/148 (61.49%), Query Frame = -2
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKE-RLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +  +    + LR+ A+F+N+++R +KE +++    AQG V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  +   G  FDP LH+A++++D+ +F  G + +E +KG+KL DR+LRPSMVKV+
Sbjct:   64 KIKELEKLANDNEEKYLRLYAEFENYKRRIQKENQINATYKAQG-VLTDILPSIDNIERA-LQIEGDDESFKSLQKGVQMVHESLLRALKDNGLEEILAEGKEFDPNLHQAVVQDDNPDFKSGEVTQELQKGYKLKDRVLRPSMVKVN 209          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_STAEQ (Protein grpE OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=grpE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.014e-19
Identity = 52/148 (35.14%), Postives = 91/148 (61.49%), Query Frame = -2
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKE-RLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            K+  L +  +    + LR+ A+F+N+++R +KE +++    AQG V+  +L  +DN ERA  QI+   E  + +    Q +++ L+  L   G+  +   G  FDP LH+A++++D+ +F  G + +E +KG+KL DR+LRPSMVKV+
Sbjct:   64 KIKELEKLANDNEEKYLRLYAEFENYKRRIQKENQINATYKAQG-VLTDILPSIDNIERA-LQIEGDDESFKSLQKGVQMVHESLLRALKDNGLEEILAEGKEFDPNLHQAVVQDDNPDFKSGEVTQELQKGYKLKDRVLRPSMVKVN 209          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_ARCB4 (Protein grpE OS=Arcobacter butzleri (strain RM4018) GN=grpE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.324e-19
Identity = 55/150 (36.67%), Postives = 77/150 (51.33%), Query Frame = -2
Query:  389 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEE---KINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 829
            KV  L  EL     + LR  ADF+N +KR EKE+   +  A  +  + LL  LD  E A    K   +  E   K+    +   K  +       +  VET G  FDP +H A+M+ DS E + G I++E +KG+ L DRLLRPSMV ++
Sbjct:   36 KVARLESELKESEEKFLRAYADFENMKKRLEKEKYQAIDYASEKFAKDLLTPLDTLEMALNSAKADVDANELLEKLKEGIELTLKNFITTFEKHNITKVETDGE-FDPNVHNAVMQVDSAEHNSGQIVQELQKGYVLKDRLLRPSMVSIA 184          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_ACIC5 (Protein grpE OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=grpE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.324e-19
Identity = 50/134 (37.31%), Postives = 80/134 (59.70%), Query Frame = -2
Query:  386 RILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVSA 787
            R+ R+ A+FDN RKR  KER      +     E  L VLDNF+ A       T   E++    + I KQ+ E L SL ++P+ETVG  FDP +HEA+   +  +  +  +IEE R+G+++ +RL+RP++V++++
Sbjct:   69 RLARLQAEFDNARKREAKERSEFRDYSVASTAEAFLPVLDNFQLALAS----TGTAEQLRMGVELIVKQMDEALRSLSIIPIETVGAQFDPRVHEALEMVEREDVPDHQVIEEVRRGYRIRERLMRPALVRIAS 198          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_METST (Protein grpE OS=Methanosphaera stadtmanae (strain DSM 3091) GN=grpE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.259e-19
Identity = 48/140 (34.29%), Postives = 86/140 (61.43%), Query Frame = -2
Query:  392 EELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKV 811
            +E+   + ++ RI ADF+NF+KR+ KE+   V  A   ++ ++L+  ++ ERA     ++ + ++ +    + IYK+L +IL   GV P+ET    FDP  HEA+M ED+ +++   II++ +KG+ L  +++R S VKV
Sbjct:   36 QEIQQYKDKLQRIHADFENFKKRSIKEKQEFVKFANEGLILKVLEAYEDLERA-----LEVKEDKNLREGVELIYKKLTKILEDEGVEPIETKNQKFDPYKHEALMTEDNDDYENNEIIQDLQKGYTLNSKVIRYSKVKV 170          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_CHLPN (Protein grpE OS=Chlamydia pneumoniae GN=grpE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.259e-19
Identity = 52/160 (32.50%), Postives = 88/160 (55.00%), Query Frame = -2
Query:  359 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINN---SYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVSAGPGPAKPKE 829
            ++V L  EL  +  + L   A+ +N RKR +KER  L+  A    +   L  +++ E+A   +   T+  + + N    +  I  Q  +I    G++   ++G  F+P LHEA+  E+++E  EG I+EEF KG+K+G+R +R + VKV+  P P + KE
Sbjct:   28 EIVTLKTELKEKNDKYLMALAESENSRKRLQKERQELMQYALENTLIDFLNPIESMEKA---LGFATQMSDDVKNWALGFNMILNQFKQIFEEKGIIEYSSIGQKFNPFLHEAVQTEETSEVPEGTILEEFAKGYKIGERPIRVAKVKVAKAPTPKENKE 184          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_CHLAB (Protein grpE OS=Chlamydophila abortus GN=grpE PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.950e-19
Identity = 51/164 (31.10%), Postives = 87/164 (53.05%), Query Frame = -2
Query:  338 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVSAGPGPAKPKEEQPSEGE 829
            ++  L  EL  +  + L + A+ +N RKR +KER  ++  A    +   L  +++ E+A       ++  +     +  I +Q  ++    G+V   +VG  F+P LHEA+  E++T+  EG I+EEF KG+K+GDR +R + VKVS  P P   + E  +  E
Sbjct:   28 EIATLKAELKEKNDKYLMVLAESENARKRMQKERQEMMQYAVENALIDFLVPIESMEKALGFASQMSDEVKNWALGFNMILQQFKQVFEEKGIVEYSSVGQKFNPFLHEAVETEETTKVPEGTIVEEFSKGYKIGDRPIRVAKVKVSKAPAPQGTEAEIENNNE 191          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_BACSH (Protein grpE OS=Bacillus sphaericus GN=grpE PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.950e-19
Identity = 51/136 (37.50%), Postives = 81/136 (59.56%), Query Frame = -2
Query:  389 ERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVS 796
            E  R LR+ ADFDN R+R + +  +        ++  LL VLDNFERA  Q++  +E    I    + +Y+ L+E     G+  ++  G  FDP +H+A+M+E  +E + GV++ E +KG+ L DR+LRP+MV V+
Sbjct:   63 EENRHLRLRADFDNMRRRQQLDGEAAEKYRAQSLLSDLLPVLDNFERA-LQVETTSEETASIIKGIEMVYRSLLEATVFEGLQVIKAEGEQFDPNIHQAVMQEQDSEKETGVVLRELQKGYILKDRVLRPTMVSVN 197          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_CHLCV (Protein grpE OS=Chlamydophila caviae GN=grpE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.121e-18
Identity = 48/157 (30.57%), Postives = 86/157 (54.78%), Query Frame = -2
Query:  359 KVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVSAGPGPAKPKE 829
            ++  L  EL  +  + L + A+ +N RKR +KER  ++  A    +   L  +++ E+A       ++  +     +  I +Q  ++    G+V   +VG  F+P LHEA+  E++T+  EG I+EEF KG+K+G+R +R + VKV+  P P + +E
Sbjct:   28 EIATLKAELKEKNDKYLMVLAESENARKRMQKERQEMMQYAVENALIDFLVPIESMEKALGFASQMSDEVKNWALGFNMILQQFKQVFEEKGIVEYSSVGQKFNPFLHEAVETEETTKVPEGTIVEEFSKGYKIGERPIRVAKVKVAKAPAPQEKEE 184          
BLAST of CX044414 vs. ExPASy Swiss-Prot
Match: GRPE_PARUW (Protein grpE OS=Protochlamydia amoebophila (strain UWE25) GN=grpE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.912e-18
Identity = 51/154 (33.12%), Postives = 87/154 (56.49%), Query Frame = -2
Query:  356 LSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNPFDPLLHEAIMREDSTEFDEGVIIEEFRKGFKLGDRLLRPSMVKVSAGPGPAKPKEE 817
            L +E +  + + LR+ AD +N RKR +KER  +   A   ++   L+ LDN E A    +  ++  +     +Q I  Q  ++L S G+  +E+ G  FDP LHEAI   ++  +  G+I+EE  +G+K+GDR++RP+ VKV+       P+++
Sbjct:   51 LKKEATEYKDKYLRLLADSENARKRLQKERQEISRYALENMVVDFLKPLDNLENALKFAQGMSDEVKNWAFGFQMILTQFKDVLASNGITALESQGTFFDPHLHEAIEMVETDSYAPGIIVEENVRGYKMGDRMIRPARVKVAKAISAIDPQDK 204          
The following BLAST results are available for this feature:
BLAST of CX044414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 357
Match NameE-valueIdentityDescription
GRPE_STAES1.014e-1935.14Protein grpE OS=Staphylococcus epidermidis (strain... [more]
GRPE_STAEQ1.014e-1935.14Protein grpE OS=Staphylococcus epidermidis (strain... [more]
GRPE_ARCB41.324e-1936.67Protein grpE OS=Arcobacter butzleri (strain RM4018... [more]
GRPE_ACIC51.324e-1937.31Protein grpE OS=Acidobacterium capsulatum (strain ... [more]
GRPE_METST2.259e-1934.29Protein grpE OS=Methanosphaera stadtmanae (strain ... [more]
GRPE_CHLPN2.259e-1932.50Protein grpE OS=Chlamydia pneumoniae GN=grpE PE=3 ... [more]
GRPE_CHLAB2.950e-1931.10Protein grpE OS=Chlamydophila abortus GN=grpE PE=3... [more]
GRPE_BACSH2.950e-1937.50Protein grpE OS=Bacillus sphaericus GN=grpE PE=3 S... [more]
GRPE_CHLCV1.121e-1830.57Protein grpE OS=Chlamydophila caviae GN=grpE PE=3 ... [more]
GRPE_PARUW1.912e-1833.12Protein grpE OS=Protochlamydia amoebophila (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_17D09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-17D09-H17-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044414 ID=CX044414; Name=CX044414; organism=Citrus sinensis; type=EST; length=830bp
TTTTTTACCTATAAAAATTTCTCAATAAACTGTCAGGTAAAAATATAGCT
CAGGCAAAACATAGGTCCAGGAGCACAATAACACTACACAAAGGTTTGAC
AAAGAAAGGCTAAAATCAGCCAAATAAATGCTAATCCCTAGAGCCATTAT
GAATTCCTCTGTTGAAACAAGCAATAACAGTCTCAGTAATCACACCCCAT
GAGATTAAATCCTATAAGCAAAACTTTTAACATTATCATGGCTGTTGCTT
TTACAAAACTGAATCTAGGTATGTGTATCAAGAGGACTCCGCTTCAACTT
CTTCTGTGCTGCTATCTGCGGTTTCAACTACAGCTGCCTCTCCTTCTGAT
GGTTGTTCTTCTTTCGGTTTCGCAGGCCCTGGACCAGCCGATACCTTTAC
CATCGATGGACGTAGGAGCCTATCGCCAAGTTTGAACCCCTTGCGGAATT
CTTCAATAATCACACCTTCATCAAATTCTGTGGAATCCTCGCGCATAATT
GCTTCGTGAAGCAATGGATCAAAAGGATTCCCAACCGTCTCCACAGGAAC
AACACCAAGTGATCCTAGGATTTCCACTAATTGCTTATATATGCTCTGAT
AGCTGTTGTTTATTTTCTCCTCTCCCTCGGTCTGCACCTTAATTTGAGTT
TTAGCTCTCTCAAAATTATCCAAAACTTGCAACAATCTCTCCATGACTTC
TCCTTGAGCATTTGTTACCAGTGAAAGGCGTTCCTTCTCCGTTCTCTTAC
GAAAATTGTCAAAGTCAGCACTGATCCTAAGAATACGAGCCCTCTCAGCT
GACAATTCTTCAGACAAGTTAACAACTTTC
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