CX044219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP1_ORYSJ (Tubby-like F-box protein 1 OS=Oryza sativa subsp. japonica GN=TULP1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.488e-28 Identity = 74/180 (41.11%), Postives = 90/180 (50.00%), Query Frame = -2 Query: 254 NVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 793 N+L +RGPRRM+C + P E L+ FR + + +L+NK PRWHE LQCWCLNF GRVTVASVKNFQL+ + + ++LQFGKV ++FTMDYR PL AFQAFAI LSSF TKLACE Sbjct: 226 NLLKSRGPRRMYCALEC------------PSTQETWENCLKTKFRKPTGNT-------------------------------VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLV------AAADPNDPASSKDEETVLLQFGKVDDNIFTMDYRQPLSAFQAFAISLSSFGTKLACE 356
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TLP2_ORYSJ (Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.756e-25 Identity = 62/112 (55.36%), Postives = 70/112 (62.50%), Query Frame = -2 Query: 260 DDEDGKL------RPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLA 577 D +DGK L+L +K P WHE LQCWCLNF GRV VASVKNFQLI P ++LQFGK+ D+FTMDYR PL AFQAFAICLS+F TKLA Sbjct: 267 DPQDGKRLSNSIPSSLVLNSKVPSWHEHLQCWCLNFHGRVMVASVKNFQLI----------APVEPGEPSDKTVVLQFGKIDDDVFTMDYRQPLSAFQAFAICLSNFGTKLA 368
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TULP1_MOUSE (Tubby-related protein 1 OS=Mus musculus GN=Tulp1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.418e-23 Identity = 75/182 (41.21%), Postives = 93/182 (51.10%), Query Frame = -2 Query: 254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799 E NVLG RGPRRM I IP + D VP + PR+ D +K+L+ ++ L NKPP W+E + LNF+GRVT ASVKNFQ++ + D I+LQFG+V +D FT+DYRYPL A QAFAI LSSFD KLACE Sbjct: 410 ETNVLGFRGPRRMTVI---IPGMNSD-NERVP----IRPRNASDGLLVRWQNKTLESLIE-------------------------LHNKPPIWNEDSGSYTLNFQGRVTQASVKNFQIVHAD---------------DPDYIVLQFGRVAEDAFTLDYRYPLCALQAFAIALSSFDGKLACE 543
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TULP1_HUMAN (Tubby-related protein 1 OS=Homo sapiens GN=TULP1 PE=1 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 4.125e-23 Identity = 71/182 (39.01%), Postives = 92/182 (50.55%), Query Frame = -2 Query: 254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799 E NVLG RGPRRM I+ + A + V + PR+ D +K+L+ ++ L NKPP W++ + LNF+GRVT ASVKNFQ++ + D I+LQFG+V +D FT+DYRYPL A QAFAI LSSFD KLACE Sbjct: 409 ETNVLGFRGPRRMTVIIPGMSAENERV--------PIRPRNASDGLLVRWQNKTLESLIE-------------------------LHNKPPVWNDDSGSYTLNFQGRVTQASVKNFQIVHAD---------------DPDYIVLQFGRVAEDAFTLDYRYPLCALQAFAIALSSFDGKLACE 542
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TUB_HUMAN (Tubby protein homolog OS=Homo sapiens GN=TUB PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.016e-21 Identity = 67/182 (36.81%), Postives = 95/182 (52.20%), Query Frame = -2 Query: 254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799 E NVLG +GPR+M I +P ++ V + + PR+ ++ + +K+ + ++ L+NK P W++ Q + LNF GRVT ASVKNFQ+I + D I++QFG+V +D+FTMDY YPL A QAFAI LSSFD+KLACE Sbjct: 373 ETNVLGFKGPRKMSVI---VPGMNM-----VHERVSIRPRNEHETLLARWQNKNTESIIE-------------------------LQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGN---------------DPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKLACE 506
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TULP3_MOUSE (Tubby-related protein 3 OS=Mus musculus GN=Tulp3 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21 Identity = 69/182 (37.91%), Postives = 96/182 (52.75%), Query Frame = -2 Query: 254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799 E NVLG +GPR+M I IP +++ +P +P R+ +S S +KS+++ ++ L NK P W++ Q + LNF GRVT ASVKNFQ++ + D I++QFG+V D+FT+DY YPL A QAFAI LSSFD+KLACE Sbjct: 327 ETNVLGFKGPRKMSVI---IPGMNMN-HERIPFRP----RNEHESLLSKWQNKSMENLIE-------------------------LHNKAPVWNDDTQSYVLNFHGRVTQASVKNFQIVHGN---------------DPDYIVMQFGRVADDVFTLDYNYPLCALQAFAIGLSSFDSKLACE 460
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TULP3_HUMAN (Tubby-related protein 3 OS=Homo sapiens GN=TULP3 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21 Identity = 69/182 (37.91%), Postives = 95/182 (52.20%), Query Frame = -2 Query: 254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799 E NVLG +GPR+M I IP +++ +P QP+ + DS S ++++++ V+ L NK P W+ Q + LNFRGRVT ASVKNFQ++ + D I++QFG+V D+FT+DY YPL A QAF I LSSFD+KLACE Sbjct: 309 ETNVLGFKGPRKMSVI---IPGMTLN-HKQIPYQPQ----NNHDSLLSRWQNRTMENLVE-------------------------LHNKAPVWNSDTQSYVLNFRGRVTQASVKNFQIVHKN---------------DPDYIVMQFGRVADDVFTLDYNYPLCAVQAFGIGLSSFDSKLACE 442
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TUB_RAT (Tubby protein homolog OS=Rattus norvegicus GN=Tub PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 67/182 (36.81%), Postives = 95/182 (52.20%), Query Frame = -2 Query: 254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799 E NVLG +GPR+M I +P ++ V + + PR+ ++ + +K+ + ++ L+NK P W++ Q + LNF GRVT ASVKNFQ+I + D I++QFG+V +D+FTMDY YPL A QAFAI LSSFD+KLACE Sbjct: 372 ETNVLGFKGPRKMSVI---VPGMNM-----VHERVCIRPRNEHETLLARWQNKNTESIIE-------------------------LQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGN---------------DPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKLACE 505
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TUB_MOUSE (Tubby protein OS=Mus musculus GN=Tub PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21 Identity = 67/182 (36.81%), Postives = 95/182 (52.20%), Query Frame = -2 Query: 254 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLACE 799 E NVLG +GPR+M I +P ++ V + + PR+ ++ + +K+ + ++ L+NK P W++ Q + LNF GRVT ASVKNFQ+I + D I++QFG+V +D+FTMDY YPL A QAFAI LSSFD+KLACE Sbjct: 372 ETNVLGFKGPRKMSVI---VPGMNM-----VHERVCIRPRNEHETLLARWQNKNTESIIE-------------------------LQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGN---------------DPDYIVMQFGRVAEDVFTMDYNYPLCALQAFAIALSSFDSKLACE 505
BLAST of CX044219 vs. ExPASy Swiss-Prot
Match: TULP2_MOUSE (Tubby-related protein 2 OS=Mus musculus GN=Tulp2 PE=2 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.916e-20 Identity = 66/180 (36.67%), Postives = 90/180 (50.00%), Query Frame = -2 Query: 260 ELNVLGTRGPRRMHCIMHSIPASSIDVGGSVPGQPELLPRSLEDSFRSISFSKSLDHSVDFSSARFSEIGALREDDEDGKLRPLILKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIXXXXXXXXXXXXXXXXXPEHDKIILQFGKVGKDMFTMDYRYPLFAFQAFAICLSSFDTKLA 799 E NVLG RGPR+M I+ + + + ++ P++ +DS S K H + L+L+NK P W ++ + LNF GRVT ASVKNFQ++ E D ++LQFG+V ++FTMD+RYPL QAFAICLSSFD KLA Sbjct: 429 ETNVLGFRGPRKMTVILPGMDSRK--------QRMKVQPQNDQDSILS-RVQKGAGHGL------------------------LLLQNKAPSWSDESGAYVLNFHGRVTRASVKNFQIVHPD---------------EPDHLVLQFGRVAPNIFTMDFRYPLCPLQAFAICLSSFDGKLA 560 The following BLAST results are available for this feature:
BLAST of CX044219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044219 ID=CX044219; Name=CX044219; organism=Citrus sinensis; type=EST; length=800bpback to top |