CX044148

Overview
NameCX044148
Unique NameCX044148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13F_HORVU (Putative glucan endo-1,3-beta-glucosidase GVI (Fragment) OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.976e-43
Identity = 97/247 (39.27%), Postives = 150/247 (60.73%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAM-SAISYNDVKVVVTETGWPSMG 815
            +G+NYG + ++LPSP+KVV L K+  I  V+ +  D+ VL AL NS + VV+   N +L+  A+D S+  +WV + +  +  A     +  GNEV   P  +   ++PAMKN+  +L    L  +V V++ +A   L  SYPPS G+F S+   P + P++  L  + + L+VN YP+FAYSA+   + LDYAL   +     + NG++Y+N+FDA LDAV+AA+  A     +++VV+ETGWPS G
Sbjct:    7 IGVNYGMMGSDLPSPDKVVALYKANNITDVRIFHPDTNVLEALRNSGLGVVLGTLNSDLAPLASDASYAASWVHSYVQPFAGAVSFRYINAGNEVI--PGESAALVLPAMKNLEAALQAAGL--SVPVTTAMATSVLGTSYPPSQGTF-SEAALPTVGPIVSHLASSGTPLLVNVYPYFAYSADPSSVRLDYALLSSSAAVAVTDNGVEYANMFDAILDAVYAAVEKAGGGESLELVVSETGWPSGG 248          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13K_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL161 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.193e-43
Identity = 91/249 (36.55%), Postives = 147/249 (59.04%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNT---TPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMG 815
            +G+ YG+ ANNLPS + V+ L  + GI +++ Y  D  +  AL  S+I +++  PN++L +A A+ S  + WVQ NI  ++P  K + +++GN+V   P N    + FL+ AMKNVYN+L    L   +KVS+    G L N+YPP    F+ +  +  + P+++FL + +  L+ N YP+F + +N   +SL YALF          N   Y NLFDA LD+++ A+      +V+++V+E+GWPS G
Sbjct:   12 IGVCYGKAANNLPSDQDVINLYNANGIRKLRIYYPDKNIFKALNGSNIEIILGVPNQDL-EALANSSIANGWVQDNIRSHFPYVKFKYISIGNKV--SPTNNDQYSEFLLQAMKNVYNALAAAGLQDMIKVSTVTYSGVLANTYPPERSIFREE-FKSFINPIIQFLARNNLPLLANVYPYFVHVSNTADVSLSYALFTQ-----QGTNSAGYQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEG 251          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.782e-43
Identity = 90/250 (36.00%), Postives = 149/250 (59.60%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNT---TPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGD 818
            +G+ YG++ANNLPS + V+ L K+ GI +++ Y  D  +  AL  S+I +++  PN++L +A A+ S  + WVQ NI  ++P  K + +++GNEV   P N    + FL+ AM+NVYN+L    L   +KV++    G L N+YPP +  F+ +     + P+++FL + +  L+ N YP+F + +N   + L YALF          N   Y NLFDA LD+++ A+      +V+++V+E+GWPS G+
Sbjct:   32 IGVCYGKIANNLPSEQDVINLYKANGIRKMRIYYPDKNIFKALKGSNIEIILDVPNQDL-EALANSSIANGWVQDNIRSHFPYVKFKYISIGNEV--SPINNGQYSQFLLHAMENVYNALAASGLQDKIKVTTATYSGLLANTYPPKASIFRGE-FNSFINPIIQFLAQNNLPLLANVYPYFVHISNTADVPLSYALFTQR-----GKNSAGYQNLFDAILDSMYFAVEKAGGPNVEIIVSESGWPSEGN 272          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.396e-42
Identity = 92/250 (36.80%), Postives = 145/250 (58.00%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNT---TPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGD 818
            +G+ YG+ ANNLPS + V+ L  + GI +++ Y+ D+ V  AL  S+I +++  P ++L ++  D S  + WVQ NI  ++P  K + +AVGNEV   P N     PF+ PAM+NVYN+L    L   +KVS+    G L N+YPP    F+ +     + P+++FL + +  L+ N YP+F +  N   + L YALF          N   Y NLFDA LD+++ A+      +V+++V+E+GWPS G+
Sbjct:   32 IGVCYGKHANNLPSDQDVINLYNANGIRKMRIYNPDTNVFNALRGSNIEIILDVPLQDL-QSLTDPSRANGWVQDNIINHFPDVKFKYIAVGNEV--SPGNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVSTATYSGILANTYPPKDSIFRGE-FNSFINPIIQFLVQHNLPLLANVYPYFGHIFNTADVPLSYALFTQ-----QEANPAGYQNLFDALLDSMYFAVEKAGGQNVEIIVSESGWPSEGN 272          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.348e-41
Identity = 92/248 (37.10%), Postives = 150/248 (60.48%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEV--FADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMG 815
            +G+ YG++ANNLPS + V++L  S  I +++ Y  ++ V  AL  S+I +++  PN++L +A A+ S    WVQ NI  ++P  K + +AVGNEV    D      F+ PAM+N+YN+L    L + +KVS+   LG L N+YPP    F+ D  +  + P++ FL + +  L+ N YP+F ++   D + L YALF+   G  D+G    Y NLFDA +D+++ A   +   +++++V+E+GWPS G
Sbjct:   26 IGVCYGKIANNLPSDQDVIKLYNSNNIKKMRIYFPETNVFNALKGSNIEIILDVPNQDL-EALANPSKRQGWVQDNIRNHFPDVKFKYIAVGNEVDPGRDSGKYARFVGPAMENIYNALSSAGLQNQIKVSTATYLGLLTNTYPPRDSIFR-DEYKSFINPIIGFLSRHNLPLLANIYPYFGHA--DDNVPLPYALFKQQ-GLNDAG----YQNLFDALVDSMYFATEKLGGQNIEIIVSESGWPSEG 264          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13D_HORVU (Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.042e-39
Identity = 91/248 (36.69%), Postives = 143/248 (57.66%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPA-TKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQV-DSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMG 815
            +G+ YG +ANNLP   +VV+L +S+GI  ++ Y      + AL  S I +++   N +++  A   S   +WV AN+  Y+ A   I  +AVGNE+      +   ++ AM+N+  +L   +L   +KVS+ +    + NS+PPSS  F     +P +  +   L  T++ L+ N YP+FAYS N   I L+YA F+     V D+GNGL Y+NLF+A +DA++AA+       V+VVV+E+GWPS G
Sbjct:    1 IGVCYGIIANNLPPRREVVQLYRSKGITNMRIYSVQPQAIRALHGSGIRLMLGTTNNDVAVLAGSLSAATSWVHANVKPYHSAGVTIRYIAVGNEITGGAAQS---ILAAMRNLNKALAAARL-GGIKVSTAVRFDVITNSFPPSSAVF----AQPYMVDIARHLASTNAPLLANVYPYFAYSGNPRDIKLNYATFQPGATPVRDAGNGLIYTNLFNAMVDAMYAALEKAGAPSVRVVVSESGWPSAG 240          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=GSVIVT00022223001 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.549e-39
Identity = 87/219 (39.73%), Postives = 125/219 (57.08%), Query Frame = 3
Query:  165 VKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNT--TPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMG 815
            ++ YD +S  L AL  S I +++  PN  L   A+D S    WVQ N+  Y    K   +AVGNEV     N     +++PAMKNV +++    L   +KVS+      L  SYPPS+GSF SD     + P++ FL +  S L+ N YP+F+Y+ +   I LDYALF  + G V      +Y NLFDA LDA++AA+     +++K+VV+E+GWPS G
Sbjct:    1 MRIYDPNSDTLQALKGSGIELILDVPNTSLQSLASDASAASTWVQNNVVNYASDVKFRYIAVGNEVLPTGSNAQYAQYVLPAMKNVQSAITSAGLQGQIKVSTATYSSVLGTSYPPSAGSFSSD-ASSFINPIISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALFTAS-GVVVQDGSYQYQNLFDALLDALYAALEKAGGSNLKIVVSESGWPSEG 217          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.941e-39
Identity = 95/256 (37.11%), Postives = 143/256 (55.86%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQG-IGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTD---NWVQANISKYYPATKIEAVAVGNEVF-ADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYP-PSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGDENE 827
            +G+NYG  A+NLPSP  V   L ++  I RVK +D +   ++A A + IS+ V+ PN  L   A   +  D   +W++AN+S Y PAT +  +  GNE+  +   N    L+PAM+ +  +L    L + V+V++P  LG L  S   PS+ SF++         ML+F R T S  MVN YP+F+Y       +L+YALFR N G  D    L Y+++ DAQ+DA++ AM  + Y DV + V E GWP+  +  +
Sbjct:   26 IGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGL-TGVRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNPYPYFSYRPE----TLNYALFRPNSGIYDPATKLNYTSMLDAQMDAIYTAMKKLGYGDVDIAVGEAGWPTQAEPGQ 276          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: GUB2_HORVU (Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.013e-38
Identity = 96/246 (39.02%), Postives = 141/246 (57.32%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVVAFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMG 815
            +G+ YG  ANNLP+   VV + K  GI  ++ Y  + A L A+  + I+VVV  PN+ LS  AA  +   +WV++NI + YP      V VGNEV       T  LVPAMKNV+ +LV   L  ++KV++ ++   L    PPS+GSF  +     + P+++FL +T++ LM N YP+ A++ N   + + YALF  + G V       Y NLFD  +DA + AM     + VK+VV+E+GWPS G
Sbjct:    7 IGVCYGMSANNLPAASTVVSMFKFNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLSNLAASPAAAASWVKSNI-QAYPKVSFRYVCVGNEVAG---GATRNLVPAMKNVHGALVAAGL-GHIKVTTSVSQAILGVFSPPSAGSFTGE-AAAFMGPVVQFLARTNAPLMANIYPYLAWAYNPSAMDMGYALFNAS-GTVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGG 245          
BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.324e-38
Identity = 97/246 (39.43%), Postives = 140/246 (56.91%), Query Frame = 3
Query:   78 VGINYGRVANNLPSPEKVVELLKSQGIGRVKTYDTDSAVLAALANSDISVVV-AFPNEELSKAAADQSFTDNWVQANISKYYPATKIEAVAVGNEVFADPKNTTPFLVPAMKNVYNSLVKYKLDSNVKVSSPIALGALQNSYPPSSGSFKSDLIEPALKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQV-DSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPS 809
            +G+ YG VANNLP   +VV+L +S G+  ++ Y  D+  L+AL  S I +++    N+ L+  AA+ S   NWV+ N+  YYPA  I+ +A GNEV+      T  +VPAM+N+  +L    L   +KVS+ I   A+ N++PPS+G F     +  +  +   L  T + L+ N YP+FAY  N   I L+YA FR     V D   GL    LFDA +DAV AA+       V+VVV+E+GWPS
Sbjct:    2 IGVCYGVVANNLPPANEVVQLYRSNGLTGMRIYFADAKALSALRGSGIGLILDVGGNDVLASLAANASNAANWVRDNVRPYYPAVNIKYIAAGNEVWG---GDTQNIVPAMRNLGAALKAPGL-GTIKVSTSIRFDAVTNTFPPSNGVF----AQAYMTDVARLLASTGAPLLTNVYPYFAYKDNPRDIQLNYATFRPGTTTVRDPNTGLTSQCLFDAMVDAVVAALERSGAPGVRVVVSESGWPS 239          
The following BLAST results are available for this feature:
BLAST of CX044148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E13F_HORVU3.976e-4339.27Putative glucan endo-1,3-beta-glucosidase GVI (Fra... [more]
E13K_TOBAC5.193e-4336.55Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13L_TOBAC6.782e-4336.00Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13G_TOBAC4.396e-4236.80Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
E13A_SOLLC6.348e-4137.10Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E13D_HORVU2.042e-3936.69Glucan endo-1,3-beta-glucosidase GIV OS=Hordeum vu... [more]
E13B_VITVI4.549e-3939.73Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera... [more]
E13B_WHEAT5.941e-3937.11Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
GUB2_HORVU1.013e-3839.02Lichenase-2 (Fragment) OS=Hordeum vulgare PE=1 SV=... [more]
E13A_HORVU1.324e-3839.43Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_15F11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15F11-K21-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044148 ID=CX044148; Name=CX044148; organism=Citrus sinensis; type=EST; length=855bp
CAATGGCGACCCTTGCTGCATTCTCTTCCTTCTTCTTCTTCTTCCTCGTA
ACCTTCGCTTCTGCAGATACTGGCAAGGTAGGTATAAATTACGGCAGAGT
TGCAAACAACTTACCGTCGCCGGAGAAAGTTGTGGAGCTGCTGAAATCTC
AAGGAATCGGCCGAGTTAAAACATACGACACTGACTCAGCCGTACTCGCT
GCACTCGCGAACTCGGACATAAGCGTCGTCGTTGCGTTCCCGAATGAGGA
ACTCTCCAAGGCCGCAGCTGACCAGTCATTTACTGACAACTGGGTCCAGG
CCAATATCTCCAAGTACTACCCGGCAACGAAGATCGAGGCCGTCGCCGTG
GGCAACGAAGTCTTCGCAGACCCGAAGAACACGACGCCGTTTCTCGTCCC
CGCCATGAAGAACGTTTACAACTCCTTGGTTAAGTACAAGCTTGATTCTA
ACGTTAAAGTCTCCTCTCCTATTGCTTTAGGTGCGTTACAAAATTCGTAC
CCGCCATCTTCCGGGTCGTTCAAATCGGATCTCATCGAGCCCGCTTTGAA
ACCCATGTTGGAGTTTCTACGTAAGACGTCGTCGTATCTCATGGTTAATG
CGTATCCTTTTTTCGCCTACTCTGCTAACGCGGATAAGATATCTTTAGAC
TACGCTCTGTTTAGGGATAATCCCGGTCAGGTGGATTCAGGTAACGGGCT
GAAGTATAGTAACCTTTTTGACGCCCAACTCGACGCCGTTTTCGCTGCCA
TGTCAGCAATCAGTTATAACGACGTGAAGGTTGTGGTGACGGAGACTGGA
TGGCCGTCTATGGGTGACGAGAATGAGGCGGGTGCTGGTGCGGGCCATGC
CGCGG
back to top