CX044148

Overview
NameCX044148
Unique NameCX044148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX044148 vs. ExPASy Swiss-Prot
Match: E13J_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O (Fragment) OS=Nicotiana tabacum GN=PR0 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 32/91 (35.16%), Postives = 53/91 (58.24%), Query Frame = 3 
Query:  546 LKPMLEFLRKTSSYLMVNAYPFFAYSANADKISLDYALFRDNPGQVDSGNGLKYSNLFDAQLDAVFAAMSAISYNDVKVVVTETGWPSMGD 818
            + P+++FL + +  L+ N YP+F +  N   + L YALF          N   Y NLFDA LD+++ A+      +V+++V+E+GWPS G+
Sbjct:    4 INPIIQFLARNNLPLLANVYPYFGHIYNTADVPLSYALFTQQ-----EANPAGYQNLFDALLDSMYFAVEKAGGPNVEIIVSESGWPSEGN 89
The following BLAST results are available for this feature:
BLAST of CX044148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
E13J_TOBAC5.241e-1135.16Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15F11_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15F11-K21-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044148 ID=CX044148; Name=CX044148; organism=Citrus sinensis; type=EST; length=855bp
CAATGGCGACCCTTGCTGCATTCTCTTCCTTCTTCTTCTTCTTCCTCGTA
ACCTTCGCTTCTGCAGATACTGGCAAGGTAGGTATAAATTACGGCAGAGT
TGCAAACAACTTACCGTCGCCGGAGAAAGTTGTGGAGCTGCTGAAATCTC
AAGGAATCGGCCGAGTTAAAACATACGACACTGACTCAGCCGTACTCGCT
GCACTCGCGAACTCGGACATAAGCGTCGTCGTTGCGTTCCCGAATGAGGA
ACTCTCCAAGGCCGCAGCTGACCAGTCATTTACTGACAACTGGGTCCAGG
CCAATATCTCCAAGTACTACCCGGCAACGAAGATCGAGGCCGTCGCCGTG
GGCAACGAAGTCTTCGCAGACCCGAAGAACACGACGCCGTTTCTCGTCCC
CGCCATGAAGAACGTTTACAACTCCTTGGTTAAGTACAAGCTTGATTCTA
ACGTTAAAGTCTCCTCTCCTATTGCTTTAGGTGCGTTACAAAATTCGTAC
CCGCCATCTTCCGGGTCGTTCAAATCGGATCTCATCGAGCCCGCTTTGAA
ACCCATGTTGGAGTTTCTACGTAAGACGTCGTCGTATCTCATGGTTAATG
CGTATCCTTTTTTCGCCTACTCTGCTAACGCGGATAAGATATCTTTAGAC
TACGCTCTGTTTAGGGATAATCCCGGTCAGGTGGATTCAGGTAACGGGCT
GAAGTATAGTAACCTTTTTGACGCCCAACTCGACGCCGTTTTCGCTGCCA
TGTCAGCAATCAGTTATAACGACGTGAAGGTTGTGGTGACGGAGACTGGA
TGGCCGTCTATGGGTGACGAGAATGAGGCGGGTGCTGGTGCGGGCCATGC
CGCGG
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