CX044130

Overview
NameCX044130
Unique NameCX044130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK62_ARATH (Probable WRKY transcription factor 62 OS=Arabidopsis thaliana GN=WRKY62 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.302e-13
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = -3
Query:  644 FEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTC 826
            + DG+ WRKYGQK I  ++Y RSYY+C Y   QNC A KQVQ+   +P  +  TY G H C
Sbjct:  109 YHDGFLWRKYGQKQIKESEYQRSYYKCAYTKDQNCEAKKQVQKIQHNPPLYSTTYFGQHIC 169          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK64_ARATH (Probable WRKY transcription factor 64 OS=Arabidopsis thaliana GN=WRKY64 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.313e-13
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = -3
Query:  644 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTC 823
            +DG++WRKYGQK I  + Y R YYRCTY   QNC A K+VQ   ++P  +  TY G H C
Sbjct:  103 DDGFTWRKYGQKTIKTSPYQRCYYRCTYAKDQNCNARKRVQMIQDNPPVYRTTYLGKHVC 162          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.633e-13
Identity = 37/76 (48.68%), Postives = 44/76 (57.89%), Query Frame = -3
Query:  596 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKH 823
            +DGY WRKYGQK +  + YPRSYYRCT   T  C   K+V+RS +DPS    TY G HT        P P +P  H
Sbjct:  221 DDGYRWRKYGQKAVKNSPYPRSYYRCT---TVGCGVKKRVERSSDDPSIVMTTYEGQHT-------HPFPMTPRGH 286          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.609e-13
Identity = 42/116 (36.21%), Postives = 58/116 (50.00%), Query Frame = -3
Query:  518 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHT--------------CFNGSQSVPQPASPEKHEHKLNHHSDNHQKGSGINSEYLDNKE 823
            +DGY WRKYGQK +  + +PR+YYRCT   T  C   K+V+RS  DPS+   TY G HT                NGS S      P      L++++   Q  S   +EY++ +E
Sbjct:  118 DDGYKWRKYGQKPVKDSPFPRNYYRCT---TTWCDVKKRVERSFSDPSSVITTYEGQHTHPRPLLIMPKEGSSPSNGSASRAHIGLPTLPPQLLDYNNQQQQAPSSFGTEYINRQE 230          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.609e-13
Identity = 36/68 (52.94%), Postives = 43/68 (63.24%), Query Frame = -3
Query:  620 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVP 823
            EDGY WRKYGQK +  + +PRSYYRCT   T +C   K+V+RS  DPST   TY G HT  +   S P
Sbjct:  174 EDGYRWRKYGQKAVKNSPFPRSYYRCT---TASCNVKKRVERSFRDPSTVVTTYEGQHTHISPLTSRP 238          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK71_ARATH (Probable WRKY transcription factor 71 OS=Arabidopsis thaliana GN=WRKY71 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12
Identity = 34/58 (58.62%), Postives = 39/58 (67.24%), Query Frame = -3
Query:  650 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 823
            EDGY WRKYGQK +  + YPRSYYRCT   TQ C   K+V+RS +DPS    TY G H
Sbjct:  136 EDGYRWRKYGQKAVKNSPYPRSYYRCT---TQKCNVKKRVERSFQDPSIVITTYEGKH 190          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = -3
Query:  650 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 823
            EDG+ WRKYGQK + G  YPRSYYRCT   + NC A K V+R+ +DP  F  TY G H
Sbjct:  349 EDGFRWRKYGQKVVGGNAYPRSYYRCT---SANCRARKHVERASDDPRAFITTYEGKH 403          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK38_ARATH (Probable WRKY transcription factor 38 OS=Arabidopsis thaliana GN=WRKY38 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.796e-12
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = -3
Query:  644 FEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTC 826
            + DGY WRKYGQK I  + + RSYYRC+Y    NC A K  Q+  ++P  +  TY G HTC
Sbjct:  109 YYDGYLWRKYGQKSIKKSNHQRSYYRCSYNKDHNCEARKHEQKIKDNPPVYRTTYFGHHTC 169          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK28_ARATH (Probable WRKY transcription factor 28 OS=Arabidopsis thaliana GN=WRKY28 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.796e-12
Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = -3
Query:  650 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 823
            EDGY WRKYGQK +  + YPRSYYRCT   TQ C   K+V+RS +DP+    TY G H
Sbjct:  172 EDGYRWRKYGQKAVKNSPYPRSYYRCT---TQKCNVKKRVERSFQDPTVVITTYEGQH 226          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.796e-12
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = -3
Query:  647 DGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHT 820
            D ++WRKYGQK I G+ YPR+YYRC+  +++ C A KQV+RS+ DP+ F VTY G HT
Sbjct:  166 DLWAWRKYGQKPIKGSPYPRNYYRCS--SSKGCLARKQVERSNLDPNIFIVTYTGEHT 221          
The following BLAST results are available for this feature:
BLAST of CX044130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
WRK62_ARATH3.302e-1350.82Probable WRKY transcription factor 62 OS=Arabidops... [more]
WRK64_ARATH4.313e-1351.67Probable WRKY transcription factor 64 OS=Arabidops... [more]
WRK48_ARATH5.633e-1348.68Probable WRKY transcription factor 48 OS=Arabidops... [more]
WRK68_ARATH9.609e-1336.21Probable WRKY transcription factor 68 OS=Arabidops... [more]
WRK23_ARATH9.609e-1352.94Probable WRKY transcription factor 23 OS=Arabidops... [more]
WRK71_ARATH1.639e-1258.62Probable WRKY transcription factor 71 OS=Arabidops... [more]
WRK44_ARATH2.141e-1256.90WRKY transcription factor 44 OS=Arabidopsis thalia... [more]
WRK38_ARATH2.796e-1249.18Probable WRKY transcription factor 38 OS=Arabidops... [more]
WRK28_ARATH2.796e-1256.90Probable WRKY transcription factor 28 OS=Arabidops... [more]
WRK27_ARATH2.796e-1256.90Probable WRKY transcription factor 27 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15F01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15F01-K1-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044130 ID=CX044130; Name=CX044130; organism=Citrus sinensis; type=EST; length=858bp
TTTTTTTTTGCAAATCAAGTTTATTATAACTGCTTCTCATAGACAAAGTG
GAAACTAACAAGTGATACTGAGACTAGTTTATATCTCTTAGCCACCAGAA
AGAAGGCTCTTATGTTTCTAAATTATCTGTTCTTCTATTACATATTACAA
ACCAGGATAAAGCAATGAAATAGAATTAGAATGAGAATCCTGCATTGTCA
AATGGGAAGTTTGAATCGAGTTCTGCCGCATCAATGGAGAAATCCAAGTT
CAAAATTGGAGAATTGGCGACTGAATTATTGGCTGATTGTAGCTCAGGGA
GTTCAGATTCTGATTGCTGCAGATTATGAACATCTCCAAAGTTCATCTGG
TTTTGTGAAATGTAATAAAAGTTTGATTCCGCTGCTGCAGGAGGTATAAA
CGATGAGGAGAAACCACCCAAGAAATTATTCTCGTCAAGCATCAAAGATG
AAAAGCAATAGTCATTGCTCTTCATGCATCCAAGTGATGATGTCGGAAAA
GAGAAAGGAGATGCAATTTCCTTATTGTCCAAATACTCACTATTGATACC
TGAGCCTTTTTGATGATTGTCGCTATGGTGGTTTAGTTTGTGTTCATGTT
TTTCTGGCGATGCTGGTTGTGGAACCGATTGGCTGCCATTGAAACAAGTG
TGTGTTCCTCTGTATGTGACCTCAAAAGTGGAGGGGTCTTCATCTGATCT
TTGCACTTGCTTTGTCGCCCAACAATTTTGTGTATTTCTGTAGGTGCATC
TGTAATAGCTTCTGGGATATTTGGCTCCGAGGATATCTTTCTGGCCATAT
TTTCTCCAGCTATAGCCATCTTCAAAGGGTCCTTTCAGGCCACTCTCAAA
ACTGACCT
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