CX044130

Overview
NameCX044130
Unique NameCX044130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12
Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = -3
Query:  485 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQP--------ASPEKHEHKLNHHSDNHQKGSGINSEYLDNKEIASPFSFPTSS 823
            +DGY+WRKYGQK + G+++PRSYY+CT+    NC   K  +RS +   T ++ Y+GTH         PQP        A+ E+   K    +   +KGSG+ +    N++  +P   P S+
Sbjct:  211 DDGYNWRKYGQKHVKGSEFPRSYYKCTH---PNCEVKKLFERSHDGQIT-DIIYKGTH-----DHPKPQPGRRNSGGMAAQEERLDKYPSSTGRDEKGSGVYNLSNPNEQTGNPEVPPISA 322          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.228e-12
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = -3
Query:  566 PFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH--------TCFNGSQSVPQP-ASPEKHEHKLNHHSDN 829
            P  D ++WRKYGQK I G+ YPR YYRC+  +T+ C A KQV+RS +DP+   +TY   H        +  NG +  P+P   PE          DN
Sbjct:   72 PPSDSWAWRKYGQKPIKGSPYPRGYYRCS--STKGCPARKQVERSRDDPTMILITYTSEHNHPWPLTSSTRNGPKPKPEPKPEPEPEVEPEAEEEDN 166          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK66_ARATH (Probable WRKY transcription factor 66 OS=Arabidopsis thaliana GN=WRKY66 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = -3
Query:  644 DGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTC 820
            DG+ WRKYGQK I  + + R YYRC Y   QNC ATK+VQ+  ++P  +  TY G H C
Sbjct:   86 DGFIWRKYGQKTIKTSPHQRWYYRCAYAKDQNCDATKRVQKIQDNPPVYRNTYVGQHAC 144          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = -3
Query:  650 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 823
            EDGY WRKYGQK +  + YPRSYYRCT   TQ C   K+V+RS +DP+    TY   H
Sbjct:  183 EDGYRWRKYGQKAVKNSPYPRSYYRCT---TQKCNVKKRVERSYQDPTVVITTYESQH 237          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.388e-11
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = -3
Query:  650 PFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 829
            P EDGY+WRKYGQK + G++YPRSYY+CT     NC   K+V+RS E   T E+ Y+G H
Sbjct:  271 PAEDGYNWRKYGQKLVKGSEYPRSYYKCT---NPNCQVKKKVERSREGHIT-EIIYKGAH 326          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.812e-11
Identity = 31/58 (53.45%), Postives = 37/58 (63.79%), Query Frame = -3
Query:  650 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 823
            EDGY WRKYGQK +  + +PRSYYRCT      C   K+V+RS +DPS    TY G H
Sbjct:  147 EDGYRWRKYGQKAVKNSPFPRSYYRCT---NSRCTVKKRVERSSDDPSIVITTYEGQH 201          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana GN=WRKY69 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11
Identity = 53/187 (28.34%), Postives = 79/187 (42.25%), Query Frame = -3
Query:  305 PFEDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHEHKLNHHSDNHQKGSGINSEYLDNKE--IASPFSFPTSSLGCMKSNDYCFSSLMLDENNFLGGFSSSFIPPAAAESNFYYIS----------QNQMNFGDVHNLQQSES 829
            P  D ++WRKYGQK I G+ YPR YYRC+  +++ C A KQV+RS  DPS   +TY   H           P        K +H S    K +    EY + +E    +    P + L     +          E    G F  + I  ++  SNF  ++          +++  FGD+ +L    S
Sbjct:   68 PPSDSWAWRKYGQKPIKGSPYPRGYYRCS--SSKGCPARKQVERSRVDPSKLMITYACDHN---------HPFPSSSANTKSHHRSSVVLKTAKKEEEYEEEEEELTVTAAEEPPAGLDLSHVDSPLLLGGCYSEIGEFGWFYDASISSSSGSSNFLDVTLERGFSVGQEEDESLFGDLGDLPDCAS 243          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11
Identity = 31/58 (53.45%), Postives = 36/58 (62.07%), Query Frame = -3
Query:  650 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 823
            +DGY WRKYGQK +    +PRSYYRCTY     C   KQVQR  +DP+    TY G H
Sbjct:  114 DDGYRWRKYGQKSVKNNAHPRSYYRCTY---HTCNVKKQVQRLAKDPNVVVTTYEGVH 168          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11
Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = -3
Query:  650 DGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTH 820
            D ++WRKYGQK I G+ YPRSYYRC+  +++ C A KQV+R+ ++P  F +TY   H
Sbjct:  135 DAWAWRKYGQKPIKGSPYPRSYYRCS--SSKGCLARKQVERNPQNPEKFTITYTNEH 189          
BLAST of CX044130 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11
Identity = 34/89 (38.20%), Postives = 46/89 (51.69%), Query Frame = -3
Query:  557 EDGYSWRKYGQKDILGAKYPRSYYRCTYRNTQNCWATKQVQRSDEDPSTFEVTYRGTHTCFNGSQSVPQPASPEKHEHKLNHHSDNHQK 823
            +DGY WRKYGQK + G  YPRSYY+CT   T +C   K V+R+  DP     TY G H     +           ++H  +  + NHQ+
Sbjct:  415 DDGYRWRKYGQKVVKGNPYPRSYYKCT---TPDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAARTSSHQLRPNNQHNTSTVNFNHQQ 500          
The following BLAST results are available for this feature:
BLAST of CX044130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
WRK20_ARATH3.651e-1234.71Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRK65_ARATH6.228e-1240.21Probable WRKY transcription factor 65 OS=Arabidops... [more]
WRK66_ARATH1.062e-1150.85Probable WRKY transcription factor 66 OS=Arabidops... [more]
WRKY8_ARATH1.388e-1155.17Probable WRKY transcription factor 8 OS=Arabidopsi... [more]
WRKY2_ARATH1.388e-1155.00Probable WRKY transcription factor 2 OS=Arabidopsi... [more]
WRK57_ARATH1.812e-1153.45Probable WRKY transcription factor 57 OS=Arabidops... [more]
WRK69_ARATH2.367e-1128.34Probable WRKY transcription factor 69 OS=Arabidops... [more]
WRK56_ARATH3.091e-1153.45Probable WRKY transcription factor 56 OS=Arabidops... [more]
WRK29_ARATH3.091e-1150.88Probable WRKY transcription factor 29 OS=Arabidops... [more]
WRKY3_ARATH4.037e-1138.20Probable WRKY transcription factor 3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15F01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15F01-K1-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044130 ID=CX044130; Name=CX044130; organism=Citrus sinensis; type=EST; length=858bp
TTTTTTTTTGCAAATCAAGTTTATTATAACTGCTTCTCATAGACAAAGTG
GAAACTAACAAGTGATACTGAGACTAGTTTATATCTCTTAGCCACCAGAA
AGAAGGCTCTTATGTTTCTAAATTATCTGTTCTTCTATTACATATTACAA
ACCAGGATAAAGCAATGAAATAGAATTAGAATGAGAATCCTGCATTGTCA
AATGGGAAGTTTGAATCGAGTTCTGCCGCATCAATGGAGAAATCCAAGTT
CAAAATTGGAGAATTGGCGACTGAATTATTGGCTGATTGTAGCTCAGGGA
GTTCAGATTCTGATTGCTGCAGATTATGAACATCTCCAAAGTTCATCTGG
TTTTGTGAAATGTAATAAAAGTTTGATTCCGCTGCTGCAGGAGGTATAAA
CGATGAGGAGAAACCACCCAAGAAATTATTCTCGTCAAGCATCAAAGATG
AAAAGCAATAGTCATTGCTCTTCATGCATCCAAGTGATGATGTCGGAAAA
GAGAAAGGAGATGCAATTTCCTTATTGTCCAAATACTCACTATTGATACC
TGAGCCTTTTTGATGATTGTCGCTATGGTGGTTTAGTTTGTGTTCATGTT
TTTCTGGCGATGCTGGTTGTGGAACCGATTGGCTGCCATTGAAACAAGTG
TGTGTTCCTCTGTATGTGACCTCAAAAGTGGAGGGGTCTTCATCTGATCT
TTGCACTTGCTTTGTCGCCCAACAATTTTGTGTATTTCTGTAGGTGCATC
TGTAATAGCTTCTGGGATATTTGGCTCCGAGGATATCTTTCTGGCCATAT
TTTCTCCAGCTATAGCCATCTTCAAAGGGTCCTTTCAGGCCACTCTCAAA
ACTGACCT
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