CX044104

Overview
NameCX044104
Unique NameCX044104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.089e-25
Identity = 67/222 (30.18%), Postives = 115/222 (51.80%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA-DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK-------------CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H NL  L G C    R E  L+Y+FVPN +L  +   ++  + +L+W  R  +I GIA+GI YLH   R  ++H +L A  +L+    N  ++D G+ ++   D    +  +     GY++PEY   G+F+ KSD+Y+FG++V +I+SGK              ++  +T +   +    + +DP+    + ++E S    IAL C  E    RP++  ++Q
Sbjct:  404 HRNLVRLLGFCLE--RDERILVYEFVPNKSL-DYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQ 622          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.423e-25
Identity = 61/221 (27.60%), Postives = 117/221 (52.94%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCS-------------ITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H NL  LRG C +    E  L+Y ++ NG++   L     S+  L W+ R  +  G A+G+SYLH    P ++H ++ A  +L+   +  ++ D GL +L+              +G++APEY +TG+ +EK+D++ +G+++ ++++G+ +             +  + +   +  K+E  +DP+L+  ++ +E   L Q+AL CT  SP  RP +  V++
Sbjct:  359 HRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVR 577          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.858e-25
Identity = 63/220 (28.64%), Postives = 114/220 (51.82%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSG------------KCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H NL  L G C +    E  L+Y ++PNG++   L    G +  L+W  RIS+  G A+G+ YLH +  P ++H ++ A  +L+   +  ++ D GL KLL              +G++APEY +TG+ +EK+D++ FG+++ ++++G            K  I  + R      +  + +D +L+G+F       + ++AL CT   P+ RP +  V++
Sbjct:  353 HRNLLRLFGFCMTPE--ERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLK 570          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.858e-25
Identity = 71/221 (32.13%), Postives = 115/221 (52.04%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGK----------CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H NL S++G   +       L+ +++PNGNL   L     S   L W  R  +I G AKG++YLH   RP  +H NL    +L+  + NP +SD GL +LL   D    +  +   A+GY+APE      R  EK D+Y FG+++ ++++G+            ++   R   E   V + IDP +E ++S  E   + ++AL CT + PS+RP++  ++Q
Sbjct:  781 HPNLVSIKGYFWTPDLH--LLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVEYGEDSFVILSDHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQ 999          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.858e-25
Identity = 65/220 (29.55%), Postives = 116/220 (52.73%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSG------------KCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H NL  L G C S    E  L+Y ++ NG++   L     ++  L+W TR  +  G A+G+ YLH +  P ++H ++ A  +L+   +  ++ D GL KLL  +           +G++APEY +TG+ +EK+D++ FG+++ ++++G            K ++  + R+  +  KVE+ +D  L   +   E   + Q+AL CT   P+HRP +  V+Q
Sbjct:  353 HRNLLRLIGYCASSS--ERLLVYPYMSNGSVASRLK----AKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQ 566          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.858e-25
Identity = 65/218 (29.82%), Postives = 109/218 (50.00%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK-----------CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H NL  L G C    R    L+Y+++ NG+L  HL   +   K L+W TR+ + +  AKG+ YLH G  P ++H ++ +  +L+       +SD GL +   +D+      A   +GYL PEY  + + TEKSD+Y+FG+++F++LSGK            +I  + R       V   IDP +     +     + ++A  C  +   +RP ++ V+
Sbjct:  659 HRNLVPLIGYCEEADRR--ILVYEYMHNGSLGDHLH-GSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVI 873          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.858e-25
Identity = 62/221 (28.05%), Postives = 115/221 (52.04%), Query Frame = -3
Query:  288 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK-------------CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 908
            H NL  LRG C +    E  L+Y ++ NG++   L     S+  L+W TR  +  G A+G+SYLH    P ++H ++ A  +L+   +  ++ D GL KL+              +G++APEY +TG+ +EK+D++ +G+++ ++++G+               +  + +   +  K+E  +DP+L+  +   E   + Q+AL CT  SP  RP +  V++
Sbjct:  356 HRNLLRLRGFCMTPT--ERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVR 574          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.858e-25
Identity = 68/220 (30.91%), Postives = 115/220 (52.27%), Query Frame = -3
Query:  285 HENLASLRGICCSKGRGECF-LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH-GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQIL---------SGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 908
            H NL SL G CC    G+   L+Y+F+PNG+L QHL  + G+  ++ W+ R+ +    A G+ YLH G  P +VH ++    +L+   +   L+D GL +    +         +  +GYL PE   +GR  EKSD+Y+FG+++ +++         SG   IT +         + + +DPNL   ++++ A    ++A+ C + S S RPS+  V+ E
Sbjct:  617 HTNLVSLVGYCCE---GDYLALVYEFLPNGDLKQHLSGKGGNS-IINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTSGDSHITQWVGFQMNRGDILEIMDPNLRKDYNINSAWRALELAMSCAYPSSSKRPSMSQVIHE 832          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.858e-25
Identity = 67/221 (30.32%), Postives = 114/221 (51.58%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL-LADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV-------------EDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H NL  L G C    +    L+Y+++P G+L  HL +    +K L+W TR+ +  G A+G+ YLH +  P +++ +L    +L+   Y P LSD GL K+  + D      +     GY AP+Y  TG+ T KSDIY+FG+++ ++++G+ +I   T+   + + V                +DP L+G++ V        I+  C  E P+ RP + +V+
Sbjct:  157 HPNLVKLIGFCAEGDQR--LLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDN-TKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVV 374          
BLAST of CX044104 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.858e-25
Identity = 65/218 (29.82%), Postives = 110/218 (50.46%), Query Frame = -3
Query:  291 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP-GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSG-----------KCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 908
            H NL  L G C    R +  L Y+++ N +L   L      +  ++W TR  +  GIAKG+++LH + P   VH ++ A  +L+ +   P +SD GL +L  ++      K +  +GY+APEY   G  T K+D+Y+FG++V +I++G              +  F  +  ES  +   +D  L  +    EA  + ++AL C+  SP+ RP +  V+
Sbjct:  734 HPNLVKLHGFCVE--RAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVV 949          
The following BLAST results are available for this feature:
BLAST of CX044104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
CRK4_ARATH1.089e-2530.18Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
SERK2_ARATH1.423e-2527.60Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5457_ARATH1.858e-2528.64Probable LRR receptor-like serine/threonine-protei... [more]
Y3804_ARATH1.858e-2532.13Probably inactive leucine-rich repeat receptor-lik... [more]
Y2239_ARATH1.858e-2529.55Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH1.858e-2529.82Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH1.858e-2528.05Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RLK7_ARATH1.858e-2530.91Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
RLCK7_ARATH1.858e-2530.32Probable serine/threonine-protein kinase RLCKVII O... [more]
RKF1_ARATH1.858e-2529.82Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15D07_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15D07-G13-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044104 ID=CX044104; Name=CX044104; organism=Citrus sinensis; type=EST; length=910bp
CGAACTTTTGAACCACATAAAAGTTAATAAGTCGTTCTGGCGAGAAGCCA
ACTTGTTACATCGCTAAACTTCAATTACTATTAACTAAAGGGTTTACATT
AAAGGCCCACCAGGTTCCAAGAATAGATTACACCACTCCAAGTTCATGAT
TTCACAGCTTCAGTCCTCGGGTAAAGGACAGTACAAATAAGCATTAGGGG
GTGATTGATCCATCTTGCCTCTTGGAGCTGAAAAATGAGGCAAAACCTCA
GTCAAAGTTATGAACTGCCAATAATACTGCTCAATTCCTGCATCACGTTT
TCTATGGATGGCCTGTGGCTAGGAGATTCATGGGTGCAATGTAGAGCAAT
TTGCCCGAGGTTAGATGCCTCAGACACTGAAAACTTTCCTTCAAGATTTG
GGTCGATGAAATCTTCAACCTTAGATGACTCTGCTGCCTGGCGAGTGAAT
GGGGTGATACTACATTTTCCACTCAGAATCTGGAATACAATCATTCCAAA
TGCATATATGTCACTCTTTTCTGTGAATCGCCCAGTGGTGGTGTATTCAG
GAGCCAGATATCCCATGGCAGCACTGGCTTTGAGCATTGAGAAAACAATA
TCATCTGCAAGGAGTTTGTGCAGGCCAGAATCTGAAAGCAAGGGATTATA
TCGTCTATGAATGAGCACCTTCTCAGCAGACAAATTCGGGTGAACTAGAC
CAGGTCTCTTTCCATGTAAATAACTGATCCCTTTGGCAATTCCCTTTATG
ACAGAAATTCTGGTAGCCCATTCAAGAACCTTTTCACTGCCTGCCTCTAA
ATCAAGATGCTGTAAGAGGTTTCCATTGGGGACAAAATCATAGATGAGAA
AACACTCACCTCTGCCTTTTGAACAGCAGATACCTCTCAAGCTGGCAAGA
TTTTCATGTT
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