CX044092

Overview
NameCX044092
Unique NameCX044092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.342e-16
Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 1
Query:  565 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 879
            PP N N + G+ V +L  N +V+V+LQ+ + +    +E+HP HLHG DF+V+G+G G +                   V  P G W A+RF ADNPG W  HCH+E
Sbjct:  443 PPNNTNVSNGTRVVVLPYNASVEVVLQDTSILG---AESHPLHLHGFDFFVVGQGTGNYDPSKHPAEFNLVDPVQRNTVGVPAGGWVAIRFFADNPGVWFMHCHLE 545          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.365e-16
Identity = 47/137 (34.31%), Postives = 64/137 (46.72%), Query Frame = 1
Query:  472 PYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 879
            P L +  Y +   F ++ P             P N  T  G+ VY L  N +V V+LQ+   I P   E+HP HLHG +F+V+G+G G +                   +  P G WTA+RF +DNPG W  HCH E
Sbjct:  398 PILQAHYYNIPGVFTEDFPATPLHKFNYTGSGPKNLQTMNGTRVYRLPYNASVQVVLQDTGIISP---ESHPIHLHGFNFFVVGKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVWFMHCHFE 531          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC14_ARATH (Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.270e-15
Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 1
Query:  502 KDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPY-GWTALRFVADNPGAWAFHCHIE 879
            ++ F +N PP  F+   + +  P    T  G+ V +L  N++V++ILQ       N+   HP HLHG++F+V+G G G F +  +            T V  P  GWTA+RFVA+NPG W  HCHIE
Sbjct:  418 QEDFPRN-PPTKFNYTGENLPFP----TRFGTKVVVLDYNSSVELILQGTTVWASNI---HPIHLHGYNFYVVGSGFGNFDRRKDPLRYNLVDPPEETTVGVPRNGWTAVRFVANNPGVWLLHCHIE 536          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.166e-15
Identity = 43/120 (35.83%), Postives = 61/120 (50.83%), Query Frame = 1
Query:  520 NGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 879
            N  P  ++ ++     P       G+ V  L  N+TV+++LQN  A     SE HP HLHG +F+VL +G G FT  +             T  +   GW  +RFVA+NPG W FHCH++
Sbjct:  410 NRTPGVYTADFPDAPQPSGTPMVEGTKVRRLKYNSTVEIVLQNPTAFP---SENHPIHLHGFNFFVLAQGLGNFTPGNVSGYNLVDPVSRNTLAVPTGGWAVIRFVANNPGMWFFHCHLD 526          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC4_ORYSJ (Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.830e-15
Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  565 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 879
            PP N N   G+ + +L  NT+V++++Q+ + +     E+HP HLHG +F+V+G+G G +   ++              V  P G W A+RF+ADNPG W  HCH+E
Sbjct:  444 PPNNTNVKTGTKLLVLRYNTSVELVMQDTSILG---IESHPLHLHGFNFFVIGQGFGNYDAVNDPAKFNLVDPVERNTVGVPAGGWVAIRFLADNPGVWFMHCHLE 546          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC3_ARATH (Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15
Identity = 47/131 (35.88%), Postives = 65/131 (49.62%), Query Frame = 1
Query:  523 GPPENFSNEYDVMKPPVNANTT-----------LGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFT-KEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 879
            G P  F+ ++  + PPV  + T            G+  Y L   + V ++LQ+ + + P   E HP HLHG+ F+V+G G G F  + D             T    P GW A+RFVADNPGAW  HCHI+
Sbjct:  411 GTPGIFTTDFPPV-PPVQFDYTGNVSRGLWQPIKGTKAYKLKYKSNVQIVLQDTSIVTP---ENHPMHLHGYQFYVVGSGFGNFNPRTDPARFNLFDPPERNTIGTPPGGWVAIRFVADNPGAWFMHCHID 537          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC2_ARATH (Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15
Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 1
Query:  565 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 879
            PP N   + G+ V +L   TTV+++LQ  + +     E HP HLHG +F+V+G+G G F    +              +  P G W A+RF+ADNPG W  HCHIE
Sbjct:  438 PPNNTMVSRGTKVVVLKYKTTVELVLQGTSILG---IEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIE 540          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC17_ARATH (Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15
Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  565 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYG-WTALRFVADNPGAWAFHCHIE 879
            PP N   + G+ + +L  NT+V++++Q+ + +    +E+HP HLHG +F+V+G+G G F    +              V  P G W A+RF+ADNPG W  HCH+E
Sbjct:  442 PPNNTMVSNGTNLMVLPYNTSVELVMQDTSILG---AESHPLHLHGFNFFVVGQGFGNFDPNKDPRNFNLVDPIERNTVGVPSGGWAAIRFLADNPGVWFMHCHLE 544          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC13_ARATH (Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.695e-15
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 1
Query:  586 TLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKE-DEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 879
            T G+  Y L  N+ V +ILQ+ + +    +E HP HLHG++F+V+G G G F    D             T    P GW A+RFVA+NPGAW  HCHI+
Sbjct:  441 TRGTKAYKLKFNSQVQIILQDTSIVT---TENHPMHLHGYEFYVVGTGVGNFNPNTDTSSFNLIDPPRRNTIGTPPGGWVAIRFVANNPGAWLMHCHID 536          
BLAST of CX044092 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.233e-15
Identity = 39/96 (40.62%), Postives = 54/96 (56.25%), Query Frame = 1
Query:  595 SGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTK-EDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 879
            + V  +  N+TV+++LQN   I P   E+HP HLHG +F+VLG G G +    D             T  + P GW  LRF+A+NPG W FHCH++
Sbjct:  441 TSVKKIRFNSTVEIVLQNTAIISP---ESHPMHLHGFNFYVLGYGFGNYDPIRDARKLNLFNPQMHNTVGVPPGGWVVLRFIANNPGVWLFHCHMD 533          
The following BLAST results are available for this feature:
BLAST of CX044092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
LAC10_ORYSJ3.342e-1639.62Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC22_ORYSJ4.365e-1634.31Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC14_ARATH1.270e-1537.80Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 S... [more]
LAC7_ORYSJ2.166e-1535.83Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]
LAC4_ORYSJ2.830e-1536.79Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 ... [more]
LAC3_ARATH3.695e-1535.88Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=... [more]
LAC2_ARATH3.695e-1538.68Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=... [more]
LAC17_ARATH3.695e-1536.79Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 S... [more]
LAC13_ARATH3.695e-1541.41Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 S... [more]
LAC8_ARATH8.233e-1540.63Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_15C09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-15C09-E17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044092 ID=CX044092; Name=CX044092; organism=Citrus sinensis; type=EST; length=880bp
CTGGATCTCAGCTGGTGTTAGGGGAAGAAAACCTGCAACCCCTCCGGCCC
TAACACTCTTAAACTATCATCCCACTTCTGCTTCCAAAATCCCTCTCTCC
CCACCACCTATAACCCCTCTCCTCAAGGCCATTACGTTGGATTGGTGAGC
CACAGACACTGCTGATAAACGGAAGAGGGCAATTCAATTGTTCACTGGCG
GCGCATTTTAGCAACGGCTCGGCGGAACAGTGCAAGTTAAGAGGGAATGA
ACAGTGCGCACCCCAGATCCTGCATGTTCAACCAAACAAGACCTACAGGC
TCAGGATAGCTAGTACCACTGCACTCGCTTCACTCAACTTGGCTGTCAAG
AATCACAAAATGGTGGTTGTGGAGGCTGATGGAAATTACGTGCAACCATT
TGAAGTAGATGACATGGACATATATTCTGGTGAGAGCTATTCGGTCTTAT
TAACAACAAATCAAGATCCCTCCTTACTTAGGATCCATCAAATATGGTCT
TAAAGATGCTTTTGATCAGAATGGTCCCCCCGAAAACTTCTCGAATGAGT
ATGACGTGATGAAACCTCCTGTAAACGCTAATACAACTCTTGGAAGTGGG
GTTTACATGCTTGGTTTAAACACCACAGTTGATGTTATACTTCAAAATGC
AAACGCGATAAGGCCAAACTTGAGTGAAACCCACCCTTGGCATTTGCATG
GGCATGATTTTTGGGTATTAGGGCGCGGAGAAGGGAAGTTTACGAAAGAA
GATGAGAAGAAATTTAACTTGAAGAATCCACCATTGAAAAATACTGCGGT
GATATTCCCATATGGCTGGACTGCTTTAAGATTTGTTGCTGATAATCCAG
GTGCTTGGGCATTTCACTGCCATATTGAGC
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