CX044014

Overview
NameCX044014
Unique NameCX044014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_PONAB (60S ribosomal protein L15 OS=Pongo abelii GN=RPL15 PE=2 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 9.274e-45
Identity = 93/152 (61.18%), Postives = 103/152 (67.76%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P   W+  PVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 197
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_MOUSE (60S ribosomal protein L15 OS=Mus musculus GN=Rpl15 PE=2 SV=4)

HSP 1 Score: 180.259 bits (456), Expect = 9.274e-45
Identity = 93/152 (61.18%), Postives = 103/152 (67.76%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P   W+  PVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 197
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_MACFA (60S ribosomal protein L15 OS=Macaca fascicularis GN=RPL15 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.274e-45
Identity = 93/152 (61.18%), Postives = 103/152 (67.76%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P   W+  PVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 197
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_HUMAN (60S ribosomal protein L15 OS=Homo sapiens GN=RPL15 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 9.274e-45
Identity = 93/152 (61.18%), Postives = 103/152 (67.76%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P   W+  PVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 197
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_BOVIN (60S ribosomal protein L15 OS=Bos taurus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 9.274e-45
Identity = 93/152 (61.18%), Postives = 103/152 (67.76%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P   W+  PVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 197
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.066e-44
Identity = 94/152 (61.84%), Postives = 104/152 (68.42%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKG-HLHHKARPSRRATWKRNNT 718
            KARRLGYKA Q                    G   GKP   GV +LK  R+ RSVAEER GR+   LRVLNSYW+N+DSTYKY+EVILVD +HNAIRNDPR NW+C PVHKHRELRGLTSAG K RGLR KG H   K RPSR+A +KR NT
Sbjct:   47 KARRLGYKATQGFVVYRIRVRRGGRKRQVPGGRTGGKPKTHGVNELKPSRNLRSVAEERVGRRCPNLRVLNSYWVNQDSTYKYYEVILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKTRPSRQANYKRRNT 198
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_CHICK (60S ribosomal protein L15 (Fragment) OS=Gallus gallus GN=RPL15 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.524e-44
Identity = 92/152 (60.53%), Postives = 102/152 (67.11%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV QLKF RS +SVAEERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H  IR +P   W+  PVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R NT
Sbjct:    8 KARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKRIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 158
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 1.339e-43
Identity = 91/151 (60.26%), Postives = 105/151 (69.54%), Query Frame = -1 
Query:  269 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 718
            KARRLGYKAKQ                    G  YGKP + GV QLK  R  +SVAEER GR+LGGLRVLNSYW+ +D+ +KYFEVI+VDPAHNAIR DP +NW+CN VHKHRELRGLTSAGK  RGL GKG+ + +    SRRA W+R N
Sbjct:   47 KARRLGYKAKQGFSIFRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGRRLGGLRVLNSYWVAQDAAHKYFEVIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGL-GKGYRYSQTIGGSRRACWRRRN 196
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15B_SCHPO (60S ribosomal protein L15-B OS=Schizosaccharomyces pombe GN=rpl15b PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.339e-43
Identity = 90/151 (59.60%), Postives = 104/151 (68.87%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP +QGV  LK+QRS R  AEER GR    LRVLNSYW+N+D+TYK+FEVILVDP+H AIR DPRINW+ NPVHKHRE RGLTS GKK RG+ GKGH ++ +   + ATW R+NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRYNNS--PQHATWLRHNT 194
[Close]
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15A_SCHPO (60S ribosomal protein L15-A OS=Schizosaccharomyces pombe GN=rpl15a PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.983e-43
Identity = 90/151 (59.60%), Postives = 103/151 (68.21%), Query Frame = -1 
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP +QGV  LK+QRS R  AEER GR    LRVLNSYW+N+D+TYK+FEVILVDP+H AIR DPRINW+ NPVHKHRE RGLTS GKK RG+ GKGH  + +   + ATW R+NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRFNNS--PQHATWLRHNT 194
The following BLAST results are available for this feature:
BLAST of CX044014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RL15_PONAB9.274e-4561.1860S ribosomal protein L15 OS=Pongo abelii GN=RPL15... [more]
RL15_MOUSE9.274e-4561.1860S ribosomal protein L15 OS=Mus musculus GN=Rpl15... [more]
RL15_MACFA9.274e-4561.1860S ribosomal protein L15 OS=Macaca fascicularis G... [more]
RL15_HUMAN9.274e-4561.1860S ribosomal protein L15 OS=Homo sapiens GN=RPL15... [more]
RL15_BOVIN9.274e-4561.1860S ribosomal protein L15 OS=Bos taurus GN=RPL15 P... [more]
RL15_DICDI2.066e-4461.8460S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15_CHICK3.524e-4460.5360S ribosomal protein L15 (Fragment) OS=Gallus gal... [more]
RL15_ANOGA1.339e-4360.2660S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]
RL15B_SCHPO1.339e-4359.6060S ribosomal protein L15-B OS=Schizosaccharomyces... [more]
RL15A_SCHPO2.983e-4359.6060S ribosomal protein L15-A OS=Schizosaccharomyces... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_14H02_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14H02-P4-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044014 ID=CX044014; Name=CX044014; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTTTGACGAAACAAATACTCAACAAGACCTTAAACAG
AATGAGACATTTAAGGCTCTTATAATTCAAGGTAGACTCAAGAAACACAA
ATGTCTTAATTTAGAATGTACGGTTTCAAAATAAGATATGTTCCATAGTA
TTTCAATCTCTAAAAGACTCAAAATGGCAACTACTATGTCCTCCAGACAA
AATCCCTCAACTGATGATAAACATCAAAACCGTAACAATGATCAACGGTA
GCGACGGAGGGAAAGAGTATTGTTTCTCTTCCAGGTAGCCCTGCGCGAAG
GCCGAGCCTTGTGGTGCAAGTGTCCTTTTCCACGTAGGCCTCTGTACTTC
TTACCTGCAGAAGTAAGACCACGGAGTTCCCTGTGCTTATGGACAGGATT
GCATAACCAATTAATTCTTGGGTCATTACGGATGGCATTATGAGCAGGAT
CAACCAAGATCACCTCAAAGTACTTATAAGTGGAGTCCTCATTGATCCAG
TAAGAATTGAGAACCCTAAGACCTCCCAACTTACGACCGGCACGCTCCTC
TGCAACAGACCTCTTGCTGCGCTGAAACTTCAGTTGAGTAACACCCTGGT
TTGTGGGTTTACCATACACAATGCCCTTGGGAACAGGCCTCTTCCGACCA
CCGCGCCTTACCCGCACACGATAAACAACATAACCCTGCTTGGCCTTGTA
ACCCAAGCGTCGAGCCTT
back to top