CX044014

Overview
NameCX044014
Unique NameCX044014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_MYLPI (60S ribosomal protein L15 OS=Mylopharyngodon piceus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 3.299e-42
Identity = 91/152 (59.87%), Postives = 101/152 (66.45%), Query Frame = -1
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV Q+KF RS +SVAEERAGR  GGLRVLNSYW+ EDSTYK+FEVIL+D  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR +T
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRDT 197          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_HYDAT (60S ribosomal protein L15 OS=Hydra attenuata GN=RPL15 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.299e-42
Identity = 91/152 (59.87%), Postives = 101/152 (66.45%), Query Frame = -1
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV Q+KF RS +SVAEERAGR  GGLRVL+SYW+ EDSTYK+FEV+LVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_CARAU (60S ribosomal protein L15 OS=Carassius auratus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 3.299e-42
Identity = 91/152 (59.87%), Postives = 101/152 (66.45%), Query Frame = -1
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV Q+KF RS +SVAEERAGR  GGLRVL+SYW+ EDSTYK+FEV+LVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 4.308e-42
Identity = 86/151 (56.95%), Postives = 105/151 (69.54%), Query Frame = -1
Query:  269 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 718
            KARRLGYKAKQ                    G  YGKP + GV QLK  R+ +SVAEER GR++GGLRVLNSYW+ +D+ +KY+EVI VDP HNA+R DP++NW+CN VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA W+R N
Sbjct:   47 KARRLGYKAKQGFLIYRIRVRRGGRKRPVHKGCTYGKPKSHGVNQLKPYRNLQSVAEERVGRRMGGLRVLNSYWVAQDAAFKYYEVICVDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGV-GKGYRYSQTIGGSRRAAWRRKN 196          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_HYPMO (60S ribosomal protein L15 OS=Hypophthalmichthys molitrix GN=rpl15 PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 7.349e-42
Identity = 91/152 (59.87%), Postives = 100/152 (65.79%), Query Frame = -1
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV Q+KF RS +SVAEERAGR  GGLRVLNSYW+ EDSTYK+FEVIL+D  H AIR +P   W+   V KHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVRKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 9.598e-42
Identity = 91/152 (59.87%), Postives = 101/152 (66.45%), Query Frame = -1
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV Q+KF RS +SVAEERAGR  GGLRVL+SYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:   47 KARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_EPICO (60S ribosomal protein L15 OS=Epinephelus coioides GN=rpl15 PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 9.598e-42
Identity = 91/152 (59.87%), Postives = 99/152 (65.13%), Query Frame = -1
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV Q+KF RS +S AEERAGR  G LRVLNSYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA WKR NT
Sbjct:   47 KARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWKRRNT 197          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.598e-42
Identity = 88/151 (58.28%), Postives = 104/151 (68.87%), Query Frame = -1
Query:  269 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 718
            KARRLGY+AKQ                    G  YGKP + GV QLK  R  +S+AEER GR+LGGLRVLNSYWI +D++YKYFEVIL+D  H+AIR DP+INW+C  VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA WKR N
Sbjct:   47 KARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGI-GKGYRYSQTIGGSRRAAWKRKN 196          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_PIG (60S ribosomal protein L15 (Fragment) OS=Sus scrofa GN=RPL15 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.637e-41
Identity = 87/147 (59.18%), Postives = 97/147 (65.99%), Query Frame = -1
Query:  266 GYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 703
            GYKAKQ                    G  YGKP + GV QLKF RS +SV EERAGR  G LRVLNSYW+ EDSTYK+FEVIL+DP H AIR +P   W+  PVHKHRE+RGLTSAG+K RGL GKGH  HH    SRRA W+R NT
Sbjct:    1 GYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVXEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNT 146          
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 168.703 bits (426), Expect = 2.792e-41
Identity = 90/152 (59.21%), Postives = 100/152 (65.79%), Query Frame = -1
Query:  266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 718
            KARRLGYKAKQ                    G  YGKP + GV Q+KF RS +S AEERAGR  GGLRVL+SYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:   47 KARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
The following BLAST results are available for this feature:
BLAST of CX044014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RL15_MYLPI3.299e-4259.8760S ribosomal protein L15 OS=Mylopharyngodon piceu... [more]
RL15_HYDAT3.299e-4259.8760S ribosomal protein L15 OS=Hydra attenuata GN=RP... [more]
RL15_CARAU3.299e-4259.8760S ribosomal protein L15 OS=Carassius auratus GN=... [more]
RL15_CHITE4.308e-4256.9560S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15_HYPMO7.349e-4259.8760S ribosomal protein L15 OS=Hypophthalmichthys mo... [more]
RL15_PELFU9.598e-4259.8760S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15_EPICO9.598e-4259.8760S ribosomal protein L15 OS=Epinephelus coioides ... [more]
RL15_DROME9.598e-4258.2860S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15_PIG1.637e-4159.1860S ribosomal protein L15 (Fragment) OS=Sus scrofa... [more]
RL15_PARDA2.792e-4159.2160S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14H02_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14H02-P4-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044014 ID=CX044014; Name=CX044014; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTTTGACGAAACAAATACTCAACAAGACCTTAAACAG
AATGAGACATTTAAGGCTCTTATAATTCAAGGTAGACTCAAGAAACACAA
ATGTCTTAATTTAGAATGTACGGTTTCAAAATAAGATATGTTCCATAGTA
TTTCAATCTCTAAAAGACTCAAAATGGCAACTACTATGTCCTCCAGACAA
AATCCCTCAACTGATGATAAACATCAAAACCGTAACAATGATCAACGGTA
GCGACGGAGGGAAAGAGTATTGTTTCTCTTCCAGGTAGCCCTGCGCGAAG
GCCGAGCCTTGTGGTGCAAGTGTCCTTTTCCACGTAGGCCTCTGTACTTC
TTACCTGCAGAAGTAAGACCACGGAGTTCCCTGTGCTTATGGACAGGATT
GCATAACCAATTAATTCTTGGGTCATTACGGATGGCATTATGAGCAGGAT
CAACCAAGATCACCTCAAAGTACTTATAAGTGGAGTCCTCATTGATCCAG
TAAGAATTGAGAACCCTAAGACCTCCCAACTTACGACCGGCACGCTCCTC
TGCAACAGACCTCTTGCTGCGCTGAAACTTCAGTTGAGTAACACCCTGGT
TTGTGGGTTTACCATACACAATGCCCTTGGGAACAGGCCTCTTCCGACCA
CCGCGCCTTACCCGCACACGATAAACAACATAACCCTGCTTGGCCTTGTA
ACCCAAGCGTCGAGCCTT
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