CX044014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METM7 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl15e PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/148 (43.92%), Postives = 82/148 (55.41%), Query Frame = -1 Query: 275 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 718 +AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L VLNSYW+ +D K++EVILVD H +I++D NWLC HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 47 RARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGTEKVRPSVRANSKK 192
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METM6 (50S ribosomal protein L15e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl15e PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.653e-26 Identity = 65/148 (43.92%), Postives = 82/148 (55.41%), Query Frame = -1 Query: 275 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 718 +AR LGYKAKQ KP+ G+ ++ +S + +AEERA +K L VLNSYW+ +D K++EVILVD H +I++D NWLC HK R RGLTSAGKK RGL KG K RPS RA K+ Sbjct: 47 RARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPSTLGINKITMAKSIQRIAEERAAKKYPNLEVLNSYWVGQDGKQKWYEVILVDSCHPSIKSDKSYNWLCKGTHKGRATRGLTSAGKKGRGLMYKGKGAEKVRPSVRANSKK 192
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METKA (50S ribosomal protein L15e OS=Methanopyrus kandleri GN=rpl15e PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26 Identity = 66/148 (44.59%), Postives = 81/148 (54.73%), Query Frame = -1 Query: 275 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 718 +ARRLGY+AK +P G + +SK+ +AEERA RK L VLNSYW+ ED YKY+EVI+VDP H I++D RINW+C K R RG T AGKK RGLR +G K RPS RA +R Sbjct: 50 RARRLGYRAKPGYVVVRVRVPKGGRRKSRPKK--GRRPKRMGKNKFSPGKSKQWIAEERAQRKYPNLEVLNSYWVGEDGQYKYYEVIMVDPYHPQIKSDHRINWICQKSQKGRVFRGKTGAGKKARGLRKRGKGAEKVRPSLRAHRRR 195
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_HALSA (50S ribosomal protein L15e OS=Halobacterium salinarium GN=rpl15e PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.259e-25 Identity = 66/152 (43.42%), Postives = 87/152 (57.24%), Query Frame = -1 Query: 266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 718 KAR LGYKAKQ G+ T QGV ++ ++ + +AEERA RK LR LNSYW+ ED + K+FE IL+DP H AI+ND +NW+C+ HK+R RG TSAG++ RGL+ +G RPS A KRN + Sbjct: 49 KARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNAD-KRNKS 196
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_HALS3 (50S ribosomal protein L15e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.259e-25 Identity = 66/152 (43.42%), Postives = 87/152 (57.24%), Query Frame = -1 Query: 266 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 718 KAR LGYKAKQ G+ T QGV ++ ++ + +AEERA RK LR LNSYW+ ED + K+FE IL+DP H AI+ND +NW+C+ HK+R RG TSAG++ RGL+ +G RPS A KRN + Sbjct: 49 KARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNAD-KRNKS 196
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_NATPD (50S ribosomal protein L15e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl15e PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.392e-24 Identity = 63/148 (42.57%), Postives = 85/148 (57.43%), Query Frame = -1 Query: 275 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 718 KAR LGYKAKQ K QGV ++ +++ + +AEER+GRK LRVLNSYW+ ED + K+FEVIL+DP H AI+ND ++W+C+ + R RG TSAG++ RG + +G RPS RA KR Sbjct: 49 KARSLGYKAKQGVVVARVSVRKGTARKQRFKAGRRSK--RQGVNKITRRKNLQRIAEERSGRKFRNLRVLNSYWVGEDGSQKWFEVILLDPEHGAIQNDDDLSWICDDSQRGRAYRGRTSAGQRGRGQQKRGKGTEHTRPSIRANDKR 194
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24 Identity = 62/148 (41.89%), Postives = 81/148 (54.73%), Query Frame = -1 Query: 275 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 718 +AR LGYKAKQ KP G+ ++ +S + +AEERA ++ + VLNSYW+ +D K++E+ILVDP H +I+ND +WL HK R RGLTSAGKK RGL KG KARP RA K+ Sbjct: 47 RARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAEKARPGVRANGKK 192
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METTH (50S ribosomal protein L15e OS=Methanobacterium thermoautotrophicum GN=rpl15e PE=3 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 3.102e-24 Identity = 53/103 (51.46%), Postives = 68/103 (66.02%), Query Frame = -1 Query: 302 KPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKAR 610 +PT GV ++ +S + +AEER RK + VLNSYW+ ED YK++EVILVDP H AI+NDP+I W+C H+ R RGL S GKK RGLR +G K R Sbjct: 80 RPTRMGVKKITTAKSIKRIAEERVARKYPNMEVLNSYWVWEDGKYKFYEVILVDPNHLAIKNDPKIYWICVKQHRGRVFRGLISEGKKNRGLRNRGKGAEKVR 182
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_STAMF (50S ribosomal protein L15e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.051e-24 Identity = 65/148 (43.92%), Postives = 79/148 (53.38%), Query Frame = -1 Query: 275 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 718 +AR LGYKAKQ +P G+ +S R +AEERA RK L VLNSY++ ED YK++EVILVDP H AI NDP I W+C H+ R RGLTSAGKK RGLR L + + + WKR Sbjct: 49 RARALGYKAKQGFIIVRVRVRKGGLRKQRPNK--GRRPKRMGIYGFAPSKSLRLIAEERAARKYPNLEVLNSYYVGEDGNYKWYEVILVDPHHPAICNDPDIKWICEKQHRRRVFRGLTSAGKKMRGLRKSRGLKY----TIKYKWKR 190
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_HALLT (50S ribosomal protein L15e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl15e PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.291e-24 Identity = 65/141 (46.10%), Postives = 78/141 (55.32%), Query Frame = -1 Query: 296 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 718 KAR LGYKAKQ K QGV +L ++S + ++EERA RK LRVLNSYW+ ED + K+ EVILVDP H AI ND + W+ + HK R RGLTSAG K RG R +G K RPS Sbjct: 49 KARELGYKAKQGVVVARVSVRKGGSRKQRHKAGRRSK--RQGVNRLSRRKSIQRISEERASRKYRNLRVLNSYWVGEDGSQKWHEVILVDPNHPAIENDGDLGWIASDDHKGRAFRGLTSAGTKGRGQRTRGTGTEKTRPS 187 The following BLAST results are available for this feature:
BLAST of CX044014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044014 ID=CX044014; Name=CX044014; organism=Citrus sinensis; type=EST; length=718bpback to top |