CX044014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_SULIM (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 60/141 (42.55%), Postives = 77/141 (54.61%), Query Frame = -1 Query: 308 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 718 +AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 47 RARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_SULIL (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 60/141 (42.55%), Postives = 77/141 (54.61%), Query Frame = -1 Query: 308 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 718 +AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 47 RARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_SULIK (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl15e PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 60/141 (42.55%), Postives = 77/141 (54.61%), Query Frame = -1 Query: 308 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 718 +AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 47 RARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_SULIA (50S ribosomal protein L15e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl15e PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 60/141 (42.55%), Postives = 77/141 (54.61%), Query Frame = -1 Query: 308 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHK 718 +AR LGYKAKQ +P GV + + +AEERA RK L VL SY++ ED YKY+E+I+VDP+H I+NDP WL +P +++R RGLTSAGKK RGLR KG + HK Sbjct: 47 RARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYGPAKGYKWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIIMVDPSHPVIKNDPNYKWLQDPSNRNRVFRGLTSAGKKARGLRKSKGFKGTVKHK 185
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METAC (50S ribosomal protein L15e OS=Methanosarcina acetivorans GN=rpl15e PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 60/145 (41.38%), Postives = 80/145 (55.17%), Query Frame = -1 Query: 287 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 718 +AR LGYKAKQ G+ T + G ++ S + +AE RA R+ L VLNSYW+ ED +K+FEVILVDP H I++D +NW+C+P + R RG TSAG+K RG+ +G K RPS RA Sbjct: 49 RARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEVRADRRYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWVCDPSSRGRATRGKTSAGRKGRGMATRGKGTEKTRPSIRA 190
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_HALMA (50S ribosomal protein L15e OS=Haloarcula marismortui GN=rpl15e PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 61/144 (42.36%), Postives = 77/144 (53.47%), Query Frame = -1 Query: 287 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 718 KAR GYKAKQ K QGVT++ ++ + VAEERA R LRVLNSY + +D K+ EVIL+DP H AI+ND ++W+C R RGLT AG++ RGL GKG K RPS R+ Sbjct: 49 KARSQGYKAKQGVIVARVSVRKGSARKRRHKAGRRSK--RQGVTRITRRKDIQRVAEERASRTFPNLRVLNSYSVGQDGRQKWHEVILIDPNHPAIQNDDDLSWICADDQADRVFRGLTGAGRRNRGLSGKGKGSEKTRPSLRS 190
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_ARCFU (50S ribosomal protein L15e OS=Archaeoglobus fulgidus GN=rpl15e PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.882e-21 Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = -1 Query: 275 VAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 556 +AEERA RK + VLNSYW+ ED YK+FEVILVD H AI++DP+++W+ + R RGLTSAG+K RGLR KG K RPS RA +++ Sbjct: 100 IAEERANRKYPNMEVLNSYWVGEDGRYKWFEVILVDRDHPAIKSDPQLSWVSRT--RGRVYRGLTSAGRKARGLRRKGRGAEKVRPSLRANFRK 191
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_SULSO (50S ribosomal protein L15e OS=Sulfolobus solfataricus GN=rpl15e PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21 Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = -1 Query: 332 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLR 718 +AR LGYKAKQ +P GV + R +AEERA RK L VL SY++ ED YKY+E+++VDP+H I++DP+ WL +P +++R RGLTSAGKK RGLR Sbjct: 47 RARSLGYKAKQGFVIVRVRVRRGGLNKPRPNK--GRRPKRMGVYGYSPAKGYRWIAEERAARKYPNLEVLGSYYVGEDGLYKYYEIVMVDPSHPVIKSDPKHKWLQDPSNRNRVFRGLTSAGKKVRGLR 173
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METMA (50S ribosomal protein L15e OS=Methanosarcina mazei GN=rpl15e PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.458e-21 Identity = 60/145 (41.38%), Postives = 79/145 (54.48%), Query Frame = -1 Query: 287 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 718 +AR LGYKAKQ G+ T + G ++ S + +AE RA RK L VLNSYW+ ED +K+FEVILVDP H I++D +NW+C+ + R RG TSAG+K RG+ +G K RPS RA Sbjct: 49 RARSLGYKAKQGIVVVRVNVRRGGLGHVRPNR---GRRTQKMGKNKVSGGMSIQRIAEARADRKYPNLEVLNSYWVGEDGKHKWFEVILVDPHHPVIKSDKNLNWICDASIRGRATRGKTSAGRKGRGMSTRGKGTEKTRPSIRA 190
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_SULTO (50S ribosomal protein L15e OS=Sulfolobus tokodaii GN=rpl15e PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.192e-21 Identity = 59/141 (41.84%), Postives = 77/141 (54.61%), Query Frame = -1 Query: 308 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHK 718 +AR +GYKAKQ +P GV + R +AEE+A RK L VL SY++ ED YKY+E+I+VDP H I++DP + WL +P ++ R RGLTSAGKK RGL RG KG + HK Sbjct: 46 RARAIGYKAKQGFVVVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYSPAKGYRWIAEEKAARKFPNLEVLGSYYVGEDGMYKYYEIIMVDPNHPVIKSDPNLKWLQDPANRKRVFRGLTSAGKKARGLLKSRGLKGTVKHK 184 The following BLAST results are available for this feature:
BLAST of CX044014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX044014 ID=CX044014; Name=CX044014; organism=Citrus sinensis; type=EST; length=718bpback to top |