CX044014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_THEVO (50S ribosomal protein L15e OS=Thermoplasma volcanium GN=rpl15e PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.151e-21 Identity = 62/145 (42.76%), Postives = 79/145 (54.48%), Query Frame = -1 Query: 287 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 718 +AR LGYK+K I+ G+ P +L ++S + +AEERA K L VLNSY++ ED YKY+EVILVD +H I NDP I+W+ P + R RGLTSAG K RGLR K+RPS RA Sbjct: 50 RARALGYKSKDGFIVVRSRVRRGGSNREK---IMGGRRPRRLAYNKLTRKKSLKLIAEERAADKYPNLEVLNSYYVGEDGLYKYYEVILVDKSHPNIYNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRA 191
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_THEAC (50S ribosomal protein L15e OS=Thermoplasma acidophilum GN=rpl15e PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = -1 Query: 287 KPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 610 +P +L ++S + +AEERA K + VLNSY++ ED YKYFEVILVD +H I NDP I+W+ P + R RGLTSAG K RGLR K+RPS R+ Sbjct: 84 RPRRMAYNKLTRKKSLKLIAEERAADKYPNMEVLNSYYVGEDGLYKYFEVILVDRSHPNIFNDPHISWISEPQNTGRVYRGLTSAGYKVRGLRTGRKGSSKSRPSIRS 191
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METB6 (50S ribosomal protein L15e OS=Methanoregula boonei (strain 6A8) GN=rpl15e PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.717e-20 Identity = 56/144 (38.89%), Postives = 76/144 (52.78%), Query Frame = -1 Query: 287 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 718 +AR LGYKAKQ + + G +S + +AEERA + + VLNSYW+ +D KY+EVILVD H +I++D + WL NP H+ R RG TSAG+K RG+R +G K RPS R+ Sbjct: 49 RARALGYKAKQGIAVVRVHVRRGGRRASRY--VRARRSARMGKNSSTPGKSIQRIAEERASVRYPNMEVLNSYWVGQDGKLKYYEVILVDGHHPSIQSDKNLAWLANPTHRGRAERGKTSAGRKGRGMRTRGRGTEKTRPSIRS 190
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_META3 (50S ribosomal protein L15e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl15e PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 59/147 (40.14%), Postives = 75/147 (51.02%), Query Frame = -1 Query: 278 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 718 +AR LGYKAKQ KP + ++ +S + +AEERA ++ L VLNSY + ED K++EVIL+D H +I+ND LC H +R RGLTSAGKK RGL KG K RP RA K Sbjct: 47 RARSLGYKAKQGVIVARVAVRRGGLRKPRPKHSK--KPATMAMNKITMSKSIQRIAEERAAKRYPNLEVLNSYSVGEDGKRKWYEVILIDVNHPSIKNDSSYKNLCTGKHTNRVFRGLTSAGKKGRGLMNKGKGAEKVRPGIRANKK 191
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_UNCMA (50S ribosomal protein L15e OS=Uncultured methanogenic archaeon RC-I GN=rpl15e PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20 Identity = 58/148 (39.19%), Postives = 79/148 (53.38%), Query Frame = -1 Query: 275 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 718 +AR LGYKAKQ K + G+ L + S + +AE RA RK + VLNSYW+ +D +K++E+ILVDP H +I +D ++W+ H+ R RGLTSAGKK RG R KG K PS +A +R Sbjct: 49 RARALGYKAKQGIIVARAHVRRGGRRKSRYSR--GRKSKHMGLRTLTRRTSIQRMAEVRASRKFPNMEVLNSYWVGQDGKHKWYEIILVDPHHPSIASDKNLSWITKGTHRGRAERGLTSAGKKGRGQRRKGKGTEKNYPSVQAHDRR 194
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_PICTO (50S ribosomal protein L15e OS=Picrophilus torridus GN=rpl15e PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.761e-19 Identity = 61/146 (41.78%), Postives = 82/146 (56.16%), Query Frame = -1 Query: 287 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGK-PTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHL-HHKARPSRRA 718 +AR LGYKAKQ I+ G+ P +L ++S + +AEERA K + VLNSY++ ED YKY+EVIL+D + A+ +D ++W+ N +K R RGLTSAG K RGL G G L K+RPS RA Sbjct: 48 RARSLGYKAKQGFIIVRSRVRKGGQHRPK---IMGGRRPRRLAYNKLTVKKSIQLIAEERAADKYPNMEVLNSYYVGEDGLYKYYEVILIDRSSPAVLSDKNVSWIANSANKGRVYRGLTSAGYKSRGL-GHGRLGSAKSRPSIRA 189
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_SULAC (50S ribosomal protein L15e OS=Sulfolobus acidocaldarius GN=rpl15e PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.300e-19 Identity = 60/147 (40.82%), Postives = 79/147 (53.74%), Query Frame = -1 Query: 290 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGL---RG-KGHLHHKARPSRR 718 +AR LGYKAKQ +P GV + R +AEERA RK L VL SY++ ED YKY+EVI+VD +H IR+DP + WL + V++ R RGLTSAG+K RGL RG KG + K + ++ Sbjct: 47 RARALGYKAKQGFVMVRVRVRRGGLNKPRPNS--GRRPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVIRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGLTKSRGLKGTVQRKWKKKQK 191
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15_QUESU (60S ribosomal protein L15 OS=Quercus suber GN=RPL15 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19 Identity = 61/150 (40.67%), Postives = 72/150 (48.00%), Query Frame = -1 Query: 269 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNN 718 KARRLGYKAKQ G +GKP NQG+ QLKFQRS RS AEER R+ GGLR+LNSYWI + + + L P+ P P L GK+ RGL G+G H K+ A WKR N Sbjct: 47 KARRLGYKAKQGYVIYRVRVRRGNRKRPAPKGATFGKPVNQGINQLKFQRSLRSTAEERVARRCGGLRILNSYWITKTVSTSTLKSSLSTPSTRLSVVMPVSTGSATPYTSAENLAVSHPLGKQNRGL-GRGSKHTKS--PNHAFWKRTN 193
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_NANEQ (50S ribosomal protein L15e OS=Nanoarchaeum equitans GN=rpl15e PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17 Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = -1 Query: 278 VAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWK 556 +AEERA R + VL SYW+ ED YK++EVILVDP + I N P WL + R RG TS+ +K+RGLR G K RPS+RA +K Sbjct: 97 IAEERANRLHRNMEVLGSYWVGEDGLYKWYEVILVDPFNPNIYNRPEYVWLLQKNQRGRVFRGKTSSARKFRGLRNGGLGAEKVRPSKRANFK 189
BLAST of CX044014 vs. ExPASy Swiss-Prot
Match: RL15E_METLZ (50S ribosomal protein L15e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl15e PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.543e-15 Identity = 51/142 (35.92%), Postives = 75/142 (52.82%), Query Frame = -1 Query: 296 KARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQ-GVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPS 718 +AR LGYKAKQ + G+ TN+ G+ + ++ +S+AEERA + + VLNSYW+ +D KY+EVILVD ++ D + W+ + + R RG TSAG++ RGL +G K RPS Sbjct: 49 RARELGYKAKQGIIVVRASIRRGGRRKSRY---IRGRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYWVGQDGKSKYYEVILVDRNSPSVLADKNLAWVADT--RGRVFRGKTSAGRRARGLHNRGTGTEKCRPS 185 The following BLAST results are available for this feature:
BLAST of CX044014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044014 ID=CX044014; Name=CX044014; organism=Citrus sinensis; type=EST; length=718bpback to top |