CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.025e-39
Identity = 89/201 (44.28%), Postives = 133/201 (66.17%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +++L  +TG AR GE+LA++G SG GKSTL+DALAGR+  ++ + G + +NG K     L    SAYV QDD L   LTV E + ++++ +LP ++ K +K ER E  I ++GL++A +T IG  G +G+SGG++RRVSI I+++  P LLFLDEPTSGLDS  ++ V+  + ++ Q         +I SIHQPS+ +  L
Sbjct:   89 KTLLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAEDSLK-GTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSKKMERVETLIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQVLKRIAQ-----SGSVVIMSIHQPSARIIGL 283          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.865e-39
Identity = 93/219 (42.47%), Postives = 135/219 (61.64%), Query Frame = 3
Query:  138 VFLTWQDLW--VTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785
            +FL ++D+   V +        + IL G++G   PGE+LA+MGPSG GK+TLL  LAGR+ S +   G +  N +  +    +   +VTQDD L   LTV E + Y+A+L+LP T+T+ QKK+RA   I+E+GL+   +T IGG   +G+SGG+++RVSI  E++  P LL LDEPTSGLDS  +   +     L   D     +T+I +IHQPSS +F
Sbjct:  155 IFLKFRDVTYKVVIKKLTSSVEKEILTGISGSVNPGEVLALMGPSGSGKTTLLSLLAGRI-SQSSTGGSVTYNDKPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDTMIGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTALRTI-----LMLHDIAEAGKTVITTIHQPSSRLF 367          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.865e-39
Identity = 87/206 (42.23%), Postives = 136/206 (66.02%), Query Frame = 3
Query:  183 QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK---RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            ++ G +++L  ++G A  G++LA++G SG GKSTL+DALAGR+   + + G + +NG K     L    SAYV QDD L   LTV E + ++++ +LP +++K +K ER E  I ++GL++A NT IG  G +G+SGG++RRVSI I+++  P +LFLDEPTSGLDS  ++ V+  + ++ Q         +I SIHQPS+ + +L
Sbjct:   92 RQNGVKTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLR-GSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQ-----SGSIVIMSIHQPSARIVEL 291          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.171e-38
Identity = 87/198 (43.94%), Postives = 131/198 (66.16%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +L G++G AR GE++A++G SG GKSTL+DALA R+   + + G+I +NG   + +L    SAYV QDD L   LTV E + +SA+ +LP +++K +KK R +  I ++GL++A  T IG  G +G+SGG++RRVSI  +++  P +LFLDEPTSGLDS ++Y V+  + ++ Q         +I SIHQPS  +  L
Sbjct:  126 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRISKESLR-GDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQ-----SGSIVIMSIHQPSYRILGL 317          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCGM_DICDI (ABC transporter G family member 22 OS=Dictyostelium discoideum GN=abcG22 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.609e-38
Identity = 95/222 (42.79%), Postives = 141/222 (63.51%), Query Frame = 3
Query:  144 LTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGW-----GAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +T++DL  +V   +KK    IL+G++G   PGEL+A+ GPSG GK+TLLD LA R  S    +G +LING +    Y    +YV Q+D L+ T+TV E + + A L+LP + T+ +K ER E  ++++GL    + +IGG        +GLSGG+KRRVSI   ++T P ++ LDEPTSGLD+ ++  VM  + +L Q+     S T+I +IHQP SE+F+L
Sbjct:   31 ITFKDLAYSVTVKKKK--MQILKGVSGTVTPGELVAVFGPSGSGKTTLLDILANRKESG-EISGAVLINGNEIDDDYKRLCSYVVQEDVLLPTITVRETLRFYADLKLPKSWTEKEKHERIEQILEQIGLSHRADAKIGGVLPGGIVLRGLSGGEKRRVSIGCGLVTSPSIVLLDEPTSGLDTTSAMAVMKTLVELTQQK----SVTVICTIHQPRSEIFKL 245          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.609e-38
Identity = 89/208 (42.79%), Postives = 128/208 (61.54%), Query Frame = 3
Query:  165 VTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTS-AYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785
            VT         +SIL G++G A PGELLA+MGPSG GK+TLL+AL GR        G +  N +  +    T   +VTQDD L   LTV E + Y+A L+LP T+T+ +K++RA   I+E+GL+   +T IGG   +G+SGG+++RV I  E++T P LL LDEPTS LDS  +  ++  +  + +       +TI+ +IHQPSS +F
Sbjct:  154 VTTKGMTSSSEKSILNGISGSAYPGELLALMGPSGSGKTTLLNALGGRFNQQNI-GGSVSYNDKPYSKHLKTRIGFVTQDDVLFPHLTVKETLTYTALLRLPKTLTEQEKEQRAASVIQELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIMTNPSLLLLDEPTSSLDSTTALKIVQMLHCIAK-----AGKTIVTTIHQPSSRLF 355          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.609e-38
Identity = 96/222 (43.24%), Postives = 134/222 (60.36%), Query Frame = 3
Query:  174 PDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSA-----YVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMN--------TRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAAS---YYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            PDG K     IL+G+TG   PGE+LA+MGPSG GK+TLL  + GRL  N +  G++  N     + Y  S      +VTQDD L+  LTV E + ++A L+LP +M+K QK  + EM IKE+GL+  +         TR+GG   KG+SGG+++R SI  E+L  P LL LDEPTSGLDS ++    +++  +AK          RT+I +IHQPSS +F +
Sbjct:  100 PDGYKH----ILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTDNVK--GKLTYND----IPYSPSVKRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMIIKELGLERFIEKHNERCRRTRVGGGFVKGISGGERKRASIAYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAK--------AGRTVITTIHQPSSRMFHM 303          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.407e-38
Identity = 100/247 (40.49%), Postives = 154/247 (62.35%), Query Frame = 3
Query:   63 EVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRS---ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGR-LGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788
            E +ES   +  ++   N+ +D   G ++ W+DL   V D +K G      +L G+ GY +PG L+A+MGPSG GKSTLLD LA R  G +T+  G+ILING++R   +  TSAYV Q D L    TV E + +SA+ +LP+++   +K+E  +  ++ + L    ++ IG   + GLS  Q++RV++ IE+ + P+LLFLDEPTSGLDS+A+  VM+ I K+         R++I +IHQPS+ +F+
Sbjct:  781 EEMESVDVDVKSSGKANLRKDIPIGCYMQWKDLVYEV-DVKKDGKNQRLRLLNGINGYVKPGMLVALMGPSGAGKSTLLDVLANRKTGGHTK--GQILINGQERTKYFTRTSAYVEQMDILTPVSTVREVILFSAKNRLPNSVPIQEKEEFVDNILETLNLLKIQHSLIGDVES-GLSLSQRKRVNMGIELASDPQLLFLDEPTSGLDSSAALKVMNLIKKI-----ASSGRSVICTIHQPSTTIFK 1018          

HSP 2 Score: 116.316 bits (290), Expect = 1.939e-25
Identity = 77/237 (32.49%), Postives = 130/237 (54.85%), Query Frame = 3
Query:   87 NKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            N + T S N +      VF++ ++L  TV  G  K  + IL  L  + +PG ++ ++G  GCGK++L++ LA  L SN +  G +L NG+       +   +YV QDD  +  LTV +   +SA  Q  D   K ++ E  +  +  + L+   NT +G    +G+SGGQK+RV+I +E++    LL +DEPT+GLDS+ S  ++++I    Q++      + + S+ QP  E+ +L
Sbjct:   50 NFSTTSSYNPSNLPRTSVFVSARNLSSTV--GHGKNEKKILTDLNFFLKPGSMVLLLGSPGCGKTSLMNTLA-LLTSNEKITGNLLFNGKTGDPNTHHRHVSYVVQDDFHMAPLTVRDTFKFSADCQSGDKSEK-ERIEIVDNVLDFLDLKHVQNTVVGDEFLRGISGGQKKRVTIGVELVKESNLLLMDEPTNGLDSSISLEMLTKIKNKVQQE----KMSCLISLLQPGLEITKL 278          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.407e-38
Identity = 89/222 (40.09%), Postives = 138/222 (62.16%), Query Frame = 3
Query:  147 TWQDLWVTVPDGQKKG-----NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            TW+    + P    +G      +++L G+TG AR GE+LA++G SG GKSTL+DALA R+   + + G + +NG      +    SAYV QDD L   LTV E + ++A+ +LP +++K +K  R +  I ++GL++A NT IG  G +G+SGG++RRVSI I+++  P LLFLDEPTSGLDS ++  V+  + ++ Q         +I ++HQPS  + +L
Sbjct:   84 TWRRSVSSDPGAPSEGIFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSLK-GNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLKRIAQ-----SGSMVIMTLHQPSYRLLRL 299          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38
Identity = 91/213 (42.72%), Postives = 132/213 (61.97%), Query Frame = 3
Query:  165 VTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA--LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAK--GLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +T    +KK ++ IL  + G+   G + AIMGPSG GK+TLLD LA RL  N   +G + +NG K    +      YVTQ D+L+ +LTV E + + AQL++P  +   +K +R +  I EMGL    +T +G    K  G+SGG++RRV+I IE+LT P ++ LDEPTSGLD++ S+YVMS + KL +       RTII +IHQP S ++ +
Sbjct:  125 ITEKGKKKKISKQILTNINGHIESGTIFAIMGPSGAGKTTLLDILAHRL--NINGSGTMYLNGNKSDFNIFKKLCGYVTQSDSLMPSLTVRETLNFYAQLKMPRDVPLKEKLQRVQDIIDEMGLNRCADTLVGTADNKIRGISGGERRRVTISIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAK-----SGRTIICTIHQPRSNIYDM 330          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AB18G_ARATH4.025e-3944.28ABC transporter G family member 18 OS=Arabidopsis ... [more]
AB22G_ARATH6.865e-3942.47ABC transporter G family member 22 OS=Arabidopsis ... [more]
AB19G_ARATH6.865e-3942.23ABC transporter G family member 19 OS=Arabidopsis ... [more]
AB20G_ARATH1.171e-3843.94ABC transporter G family member 20 OS=Arabidopsis ... [more]
ABCGM_DICDI2.609e-3842.79ABC transporter G family member 22 OS=Dictyosteliu... [more]
AB27G_ARATH2.609e-3842.79ABC transporter G family member 27 OS=Arabidopsis ... [more]
AB26G_ARATH2.609e-3843.24ABC transporter G family member 26 OS=Arabidopsis ... [more]
ABCGI_DICDI3.407e-3840.49ABC transporter G family member 18 OS=Dictyosteliu... [more]
AB6G_ARATH3.407e-3840.09ABC transporter G family member 6 OS=Arabidopsis t... [more]
ABCG1_DICDI7.590e-3842.72ABC transporter G family member 1 OS=Dictyostelium... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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