CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38
Identity = 86/198 (43.43%), Postives = 130/198 (65.66%), Query Frame = 3
Query:  204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +L G++G AR GE++A++G SG GKSTL+DALA R+  ++ + G I +NG   + ++    SAYV QDD L   LTV E + +SA+ +LP +++K +KK R +  I ++GL+ A  T IG  G +G+SGG++RRVSI  +++  P +LFLDEPTSGLDS ++Y V+  + ++ Q         +I SIHQPS  +  L
Sbjct:  133 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLR-GSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQ-----SGSIVIMSIHQPSYRIMGL 324          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37
Identity = 100/268 (37.31%), Postives = 158/268 (58.96%), Query Frame = 3
Query:   12 MSSLDHSIPVPAISRAFEVVESSSNN-KTATHSINVNEDDGDGVFLTWQDLW--VTVPDG----QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            MSS  + + +P   +   + E++S + +T T          +G  L++ ++   V V  G    +K   + IL  + G  +PG L AI+GP+G GKS+LLD LA R   +   +G++LING  R   +   S YV QDD ++ TLTV E + +SA L+LP TMT  +K ER    I+E+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+L
Sbjct:    1 MSSNSYEVSIPMSKKLNGIPETTSKDLQTLT----------EGAVLSFHNICYRVKVKTGFLLCRKTIEKEILANINGVMKPG-LNAILGPTGGGKSSLLDILAARKDPHGL-SGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 251          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37
Identity = 93/220 (42.27%), Postives = 133/220 (60.45%), Query Frame = 3
Query:  135 GVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGG-WGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            G  + W+DL VT+  G++K +  +++   GYA PG +  IMGP+  GKSTLL ALAGRL  + +  GE+ +NG K  + YG+  +V ++  LI +LTV E +YYSA LQLP  +   QK+   E  I+ M L D  N  IGG    KGL  G++RRVSI  E++ RP +LF+DEP   LDS ++  +M  + KL          T++ +I+Q S+EVF L
Sbjct:  111 GASIAWKDLTVTMK-GKRKYSDKVVKSSNGYAFPGTMTVIMGPAKSGKSTLLRALAGRLPPSAKMYGEVFVNGSKSHMPYGSYGFVERETQLIGSLTVREFLYYSALLQLPGFL--FQKRSVVEDAIQAMSLSDYANKLIGGHCYMKGLRSGERRRVSIARELVMRPHILFIDEPLYHLDSVSALLMMVTLKKLASM-----GCTLVFTIYQSSTEVFGL 322          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37
Identity = 84/199 (42.21%), Postives = 130/199 (65.33%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788
            +++L G+TG A+ GE+LAI+G SG GKSTL+DALAG++   + + G + +NG   +  L    SAYV Q+D L   LTV E + ++A+ +LP +++K +K+ R E  I ++GL    NT IG  G +G+SGG++RRVSI  +++  P +LFLDEPTSGLDS +++ V+  + K+ +         +I SIHQPS  + +
Sbjct:   49 KTLLNGITGEAKEGEILAILGASGAGKSTLIDALAGQIAEGSLK-GTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTTVKNTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVQVLKKIAR-----SGSIVIMSIHQPSGRIME 241          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.691e-37
Identity = 88/205 (42.93%), Postives = 132/205 (64.39%), Query Frame = 3
Query:  180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            G+K   + IL  + G  +PG L AI+GP+G GKS+LLD LA R   +   +G++LING  R   +   S YV QDD ++ TLTV E + +SA L+LP TMT  +K ER    I+E+GL    ++++G    +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ +  V+  + ++ ++      RTII SIHQP   +F+L
Sbjct:   55 GRKPVEKEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGL-SGDVLINGALRPTNFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 252          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG4_DICDI (ABC transporter G family member 4 OS=Dictyostelium discoideum GN=abcG4 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.884e-37
Identity = 93/203 (45.81%), Postives = 130/203 (64.04%), Query Frame = 3
Query:  201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGG-----WGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +IL  ++G    GE++A+MGPSG GKSTLLD LA R  + T   G+IL+NG++   AY    +YVTQ++  + T TV E + + A L+LPD MT  +K  R +  +K++GL   +N++IGG        KGLSGG+K+RVSI   ++T P LLFLDEPTSGLDS  S  VM  + +L +   GV   T++ S+HQP  E+F L
Sbjct:  234 TILSNVSGIVEKGEMVALMGPSGSGKSTLLDILANRKSTGTI-TGKILVNGKEIGEAYKMFCSYVTQEEVFLETSTVYETLKFHADLRLPD-MTDTEKDIRIKQVLKDVGLDRKLNSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNSLKVMKVLLELTKM-KGV---TVVCSVHQPRPEIFYL 430          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 2.884e-37
Identity = 95/223 (42.60%), Postives = 140/223 (62.78%), Query Frame = 3
Query:  138 VFLTWQDLWVTVPDG---QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAY--GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            V + ++DL  +VP+G   +KKG +++L+G++G    GEL+AIMGPSG GKSTL++ LAG     T   G +LING  R L      S Y+ QDD L+  LTV EA+  SA L+L +      ++E  +  +  +GL    NTR G      LSGGQ++R++I +E++  P ++F DEPTSGLDSA+ + V+S +  L Q     G R+II +IHQPS+++F+L
Sbjct:   75 VNIEFRDLSYSVPEGPWWRKKGYKTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGY--RETGMKGAVLINGLPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEG--RREMVKEILTALGLLSCANTRTGS-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQ-----GGRSIICTIHQPSAKLFEL 283          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.767e-37
Identity = 94/223 (42.15%), Postives = 140/223 (62.78%), Query Frame = 3
Query:  138 VFLTWQDLWVTVPDG---QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAY--GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            V + ++DL  +VP+G   +KKG +++L+G++G    GEL+AIMGPSG GKSTL++ LAG     T   G +LING  R L      S Y+ QDD L+  LTV EA+  SA L+L +      ++E  +  +  +GL    NTR G      LSGGQ++R++I +E++  P ++F DEPTSGLDSA+ + V+S +  L Q     G R+I+ +IHQPS+++F+L
Sbjct:   75 VNIEFKDLSYSVPEGPWWKKKGYKTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGY--RETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEG--RREMVKEILTALGLLPCANTRTGS-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQ-----GGRSIVCTIHQPSAKLFEL 283          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG8_DICDI (ABC transporter G family member 8 OS=Dictyostelium discoideum GN=abcG8 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.096e-36
Identity = 94/203 (46.31%), Postives = 132/203 (65.02%), Query Frame = 3
Query:  201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGA-----KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +IL  + G    GEL+A+MGPSG GKSTLLD LA R  S  +  G++L+NG++   AY    +YVTQ+D L+ T TV E + + A L+LP  +++++K +R E  I+++GL    ++R+GG  A      GLSGG+KRRVSI   ++T P L+FLDEPTSGLDS A+  +M  +  L  +  GV   T+I SIHQP  E+FQL
Sbjct:   71 TILYNVGGVIEKGELVALMGPSGSGKSTLLDILAQRK-STGKITGQLLVNGKEIGEAYKKYCSYVTQEDVLLQTYTVFETLKFYADLKLPG-VSEIEKIKRVEKVIEDVGLTLKRDSRVGGVLAGGVAVTGLSGGEKRRVSIGCGLITNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLK--GV---TVICSIHQPRPEIFQL 266          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.870e-36
Identity = 93/203 (45.81%), Postives = 132/203 (65.02%), Query Frame = 3
Query:  201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGA-----KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            +IL  ++G    GEL+A+MGPSG GKSTLLD LA R  S  +  G++L+NG++   AY    +YVTQ+D L+ T TV E + + A L+LP  +++++K +R E  I+++GL    +++IGG        KGLSGG+KRRVSI   ++T P L+FLDEPTSGLDS A+  +M  +  L  +  GV   T+I SIHQP  E+F L
Sbjct:   72 TILNNVSGVIEKGELVALMGPSGSGKSTLLDILAQRK-STGKITGQLLVNGKEIGEAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLPG-VSEIEKIKRVEQIIEDIGLTKRTHSKIGGVLPGGILMKGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLK--GV---TVICSIHQPRPEIFAL 267          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AB2G_ARATH7.590e-3843.43ABC transporter G family member 2 OS=Arabidopsis t... [more]
ABCG2_BOVIN1.295e-3737.31ATP-binding cassette sub-family G member 2 OS=Bos ... [more]
AB3G_ARATH1.295e-3742.27ABC transporter G family member 3 OS=Arabidopsis t... [more]
AB17G_ARATH1.295e-3742.21ABC transporter G family member 17 OS=Arabidopsis ... [more]
ABCG2_MACMU1.691e-3742.93ATP-binding cassette sub-family G member 2 OS=Maca... [more]
ABCG4_DICDI2.884e-3745.81ABC transporter G family member 4 OS=Dictyostelium... [more]
ABCG1_HUMAN2.884e-3742.60ATP-binding cassette sub-family G member 1 OS=Homo... [more]
ABCG1_MOUSE3.767e-3742.15ATP-binding cassette sub-family G member 1 OS=Mus ... [more]
ABCG8_DICDI1.096e-3646.31ABC transporter G family member 8 OS=Dictyostelium... [more]
ABCGC_DICDI1.870e-3645.81ABC transporter G family member 12 OS=Dictyosteliu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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