CX044004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38 Identity = 86/198 (43.43%), Postives = 130/198 (65.66%), Query Frame = 3 Query: 204 ILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +L G++G AR GE++A++G SG GKSTL+DALA R+ ++ + G I +NG + ++ SAYV QDD L LTV E + +SA+ +LP +++K +KK R + I ++GL+ A T IG G +G+SGG++RRVSI +++ P +LFLDEPTSGLDS ++Y V+ + ++ Q +I SIHQPS + L Sbjct: 133 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLR-GSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQ-----SGSIVIMSIHQPSYRIMGL 324
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_BOVIN (ATP-binding cassette sub-family G member 2 OS=Bos taurus GN=ABCG2 PE=3 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37 Identity = 100/268 (37.31%), Postives = 158/268 (58.96%), Query Frame = 3 Query: 12 MSSLDHSIPVPAISRAFEVVESSSNN-KTATHSINVNEDDGDGVFLTWQDLW--VTVPDG----QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 MSS + + +P + + E++S + +T T +G L++ ++ V V G +K + IL + G +PG L AI+GP+G GKS+LLD LA R + +G++LING R + S YV QDD ++ TLTV E + +SA L+LP TMT +K ER I+E+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+L Sbjct: 1 MSSNSYEVSIPMSKKLNGIPETTSKDLQTLT----------EGAVLSFHNICYRVKVKTGFLLCRKTIEKEILANINGVMKPG-LNAILGPTGGGKSSLLDILAARKDPHGL-SGDVLINGAPRPANFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTSYEKNERINKVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIAMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 251
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37 Identity = 93/220 (42.27%), Postives = 133/220 (60.45%), Query Frame = 3 Query: 135 GVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGG-WGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 G + W+DL VT+ G++K + +++ GYA PG + IMGP+ GKSTLL ALAGRL + + GE+ +NG K + YG+ +V ++ LI +LTV E +YYSA LQLP + QK+ E I+ M L D N IGG KGL G++RRVSI E++ RP +LF+DEP LDS ++ +M + KL T++ +I+Q S+EVF L Sbjct: 111 GASIAWKDLTVTMK-GKRKYSDKVVKSSNGYAFPGTMTVIMGPAKSGKSTLLRALAGRLPPSAKMYGEVFVNGSKSHMPYGSYGFVERETQLIGSLTVREFLYYSALLQLPGFL--FQKRSVVEDAIQAMSLSDYANKLIGGHCYMKGLRSGERRRVSIARELVMRPHILFIDEPLYHLDSVSALLMMVTLKKLASM-----GCTLVFTIYQSSTEVFGL 322
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.295e-37 Identity = 84/199 (42.21%), Postives = 130/199 (65.33%), Query Frame = 3 Query: 198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788 +++L G+TG A+ GE+LAI+G SG GKSTL+DALAG++ + + G + +NG + L SAYV Q+D L LTV E + ++A+ +LP +++K +K+ R E I ++GL NT IG G +G+SGG++RRVSI +++ P +LFLDEPTSGLDS +++ V+ + K+ + +I SIHQPS + + Sbjct: 49 KTLLNGITGEAKEGEILAILGASGAGKSTLIDALAGQIAEGSLK-GTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTTVKNTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVQVLKKIAR-----SGSIVIMSIHQPSGRIME 241
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.691e-37 Identity = 88/205 (42.93%), Postives = 132/205 (64.39%), Query Frame = 3 Query: 180 GQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYG-TSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 G+K + IL + G +PG L AI+GP+G GKS+LLD LA R + +G++LING R + S YV QDD ++ TLTV E + +SA L+LP TMT +K ER I+E+GL ++++G +G+SGG+++R SI +E++T P +LFLDEPT+GLDS+ + V+ + ++ ++ RTII SIHQP +F+L Sbjct: 55 GRKPVEKEILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGL-SGDVLINGALRPTNFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQ-----GRTIIFSIHQPRYSIFKL 252
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG4_DICDI (ABC transporter G family member 4 OS=Dictyostelium discoideum GN=abcG4 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.884e-37 Identity = 93/203 (45.81%), Postives = 130/203 (64.04%), Query Frame = 3 Query: 201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGG-----WGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +IL ++G GE++A+MGPSG GKSTLLD LA R + T G+IL+NG++ AY +YVTQ++ + T TV E + + A L+LPD MT +K R + +K++GL +N++IGG KGLSGG+K+RVSI ++T P LLFLDEPTSGLDS S VM + +L + GV T++ S+HQP E+F L Sbjct: 234 TILSNVSGIVEKGEMVALMGPSGSGKSTLLDILANRKSTGTI-TGKILVNGKEIGEAYKMFCSYVTQEEVFLETSTVYETLKFHADLRLPD-MTDTEKDIRIKQVLKDVGLDRKLNSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNSLKVMKVLLELTKM-KGV---TVVCSVHQPRPEIFYL 430
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG1_HUMAN (ATP-binding cassette sub-family G member 1 OS=Homo sapiens GN=ABCG1 PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.884e-37 Identity = 95/223 (42.60%), Postives = 140/223 (62.78%), Query Frame = 3 Query: 138 VFLTWQDLWVTVPDG---QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAY--GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 V + ++DL +VP+G +KKG +++L+G++G GEL+AIMGPSG GKSTL++ LAG T G +LING R L S Y+ QDD L+ LTV EA+ SA L+L + ++E + + +GL NTR G LSGGQ++R++I +E++ P ++F DEPTSGLDSA+ + V+S + L Q G R+II +IHQPS+++F+L Sbjct: 75 VNIEFRDLSYSVPEGPWWRKKGYKTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGY--RETGMKGAVLINGLPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEG--RREMVKEILTALGLLSCANTRTGS-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQ-----GGRSIICTIHQPSAKLFEL 283
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.767e-37 Identity = 94/223 (42.15%), Postives = 140/223 (62.78%), Query Frame = 3 Query: 138 VFLTWQDLWVTVPDG---QKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAY--GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 V + ++DL +VP+G +KKG +++L+G++G GEL+AIMGPSG GKSTL++ LAG T G +LING R L S Y+ QDD L+ LTV EA+ SA L+L + ++E + + +GL NTR G LSGGQ++R++I +E++ P ++F DEPTSGLDSA+ + V+S + L Q G R+I+ +IHQPS+++F+L Sbjct: 75 VNIEFKDLSYSVPEGPWWKKKGYKTLLKGISGKFNSGELVAIMGPSGAGKSTLMNILAGY--RETGMKGAVLINGMPRDLRCFRKVSCYIMQDDMLLPHLTVQEAMMVSAHLKLQEKDEG--RREMVKEILTALGLLPCANTRTGS-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQ-----GGRSIVCTIHQPSAKLFEL 283
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG8_DICDI (ABC transporter G family member 8 OS=Dictyostelium discoideum GN=abcG8 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.096e-36 Identity = 94/203 (46.31%), Postives = 132/203 (65.02%), Query Frame = 3 Query: 201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGA-----KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +IL + G GEL+A+MGPSG GKSTLLD LA R S + G++L+NG++ AY +YVTQ+D L+ T TV E + + A L+LP +++++K +R E I+++GL ++R+GG A GLSGG+KRRVSI ++T P L+FLDEPTSGLDS A+ +M + L + GV T+I SIHQP E+FQL Sbjct: 71 TILYNVGGVIEKGELVALMGPSGSGKSTLLDILAQRK-STGKITGQLLVNGKEIGEAYKKYCSYVTQEDVLLQTYTVFETLKFYADLKLPG-VSEIEKIKRVEKVIEDVGLTLKRDSRVGGVLAGGVAVTGLSGGEKRRVSIGCGLITNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLK--GV---TVICSIHQPRPEIFQL 266
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.870e-36 Identity = 93/203 (45.81%), Postives = 132/203 (65.02%), Query Frame = 3 Query: 201 SILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGA-----KGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791 +IL ++G GEL+A+MGPSG GKSTLLD LA R S + G++L+NG++ AY +YVTQ+D L+ T TV E + + A L+LP +++++K +R E I+++GL +++IGG KGLSGG+KRRVSI ++T P L+FLDEPTSGLDS A+ +M + L + GV T+I SIHQP E+F L Sbjct: 72 TILNNVSGVIEKGELVALMGPSGSGKSTLLDILAQRK-STGKITGQLLVNGKEIGEAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLPG-VSEIEKIKRVEQIIEDIGLTKRTHSKIGGVLPGGILMKGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLK--GV---TVICSIHQPRPEIFAL 267 The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bpback to top |