CX044004

Overview
NameCX044004
Unique NameCX044004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length791
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCGO_DICDI (ABC transporter G family member 24 OS=Dictyostelium discoideum GN=abcG24 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.526e-35
Identity = 95/259 (36.68%), Postives = 145/259 (55.98%), Query Frame = 3
Query:   39 VPAISRAFEVVESSSNNKTATH--------SINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788
            + AI   F + E   N K  TH        +I+   ++  G F            G+    + IL  + G   PG+L A+MG SG GK++LLD L+GR        G++LING      +   S YVTQDD  I TLT  E + ++A L+LP+ M+   K++R    ++E+GL    +  IG    +G+SGG++RR+SI  E++  P +LF+DEPTSGLDS ++  +++++ +L   +   G RTII SIHQPS+E+F+
Sbjct:  428 IGAIFLIFSLQEDRKNFKEDTHLVCELSFHNISCYVNERSGFF------------GKDVKRKQILDNVNGVCPPGQLTALMGLSGSGKTSLLDILSGRKNVGNID-GKVLINGAPVGKNFKRISGYVTQDDIQIGTLTCREHLMFAALLKLPENMSLEIKQQRVASVLEELGLTRVADNPIGTSEKRGISGGERRRLSIATELIVDPSILFIDEPTSGLDSHSASELITKLKQL-ANNSTKGQRTIIFSIHQPSAELFE 672          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG5_DICDI (ABC transporter G family member 5 OS=Dictyostelium discoideum GN=abcG5 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.526e-35
Identity = 97/251 (38.65%), Postives = 147/251 (58.57%), Query Frame = 3
Query:   75 SSSNNKTATHSINVNEDD---GDGVFLTWQDLWVTV------PDGQKKGNRSILQGLT---GYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRA-LAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788
            S + N +    I+ ++ D     G +L ++ L   V      PD  KK     LQ LT   GY +PG++LA+MGPSG GKSTLLD LA R  +     GEILING+  +       AYV Q D L  T TV EA+ +SA+ +LP  +TK +++   +  ++ + L    + +IG  G  GLS  Q++RV+I +E+ + P++LFLDEPTSGLDS  ++ V+  + K+ +    V +RT+I ++HQPS+ +F+
Sbjct:  862 SKNGNHSKQKPISTSQKDISSETGSYLQFKKLCYAVDVKADDPDNPKKKKSQRLQLLTDIDGYVKPGQMLALMGPSGAGKSTLLDVLAQR-KTGGHITGEILINGKPPSEFTNRIRAYVEQMDVLPPTQTVREAIAFSARCRLPPEVTKEEREIFVDKIVEVLSLSSIKDLKIGVLG-NGLSVSQRKRVNIGVELASNPEILFLDEPTSGLDSGDAFKVIDVVNKIAK----VMNRTVICTVHQPSAAIFE 1106          

HSP 2 Score: 119.398 bits (298), Expect = 2.291e-26
Identity = 79/259 (30.50%), Postives = 135/259 (52.12%), Query Frame = 3
Query:   24 DHSIPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQ-KKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGR--KRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            D   P+P      E++ +  N++          +D  G+++  ++   TV   + KK    +L  ++ + RP ++  I+G  GCGKST+   LAG+L  +    GE+L NG        +   +YVTQDD  + TLTV E   ++        +T+ +K+   +  +K +GL+ A NT +G    +G+SGGQK+RV+I + ++    LL +DEPTSGLDS+ S+ ++S + K        G    + ++ QPS ++  L
Sbjct:   93 DEYFPIPLD----ELMPNHENDELTKKIKQTRPEDKTGLYVYCRNATYTVKHRENKKVKIKLLDDVSFFLRPKQMTLILGTPGCGKSTIFQMLAGQL-KDKHFEGELLFNGHPINHKNHHRDISYVTQDDIHVPTLTVKETFRFALDCLGKKELTREEKQVSVDNCMKLLGLKHAENTLVGDNFIRGISGGQKKRVTIGVGVIKGSNLLLMDEPTSGLDSSTSFEILSDVKKFVT----YGYSPALITLLQPSVQLTSL 342          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 88/206 (42.72%), Postives = 124/206 (60.19%), Query Frame = 3
Query:  189 KGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRL--GSNTRQAGEILINGRK--RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWG-AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            K  + +++ + G A PGELLA+MG SG GK+TLL+ALA R   G     +   ++NG            AYV QDD  I +LT  E + + A +++P TMT+ QK +R +  I+++ L    NT IG  G  KGLSGG+++R++   E LT P LL  DEPTSGLDS  +  V+  + KL QR      +T+I +IHQPSSE+F+L
Sbjct:   96 KPRKHLIKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSARGVQISPSSVRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQATVRMPRTMTQKQKLQRVDQVIQDLSLIKCQNTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAASVVQVLKKLSQR-----GKTVILTIHQPSSELFEL 296          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ADP1_YEAST (Probable ATP-dependent permease OS=Saccharomyces cerevisiae GN=ADP1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 5.091e-34
Identity = 93/238 (39.08%), Postives = 142/238 (59.66%), Query Frame = 3
Query:   87 NKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKG-NRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            ++ A ++   NEDD     L+++++  +VP     G   ++L  ++G  +PG++LAIMG SG GK+TLLD LA +  +    +G I +NG    R        +V QDD L+ TLTV E V  SA L+LP  ++   KK R    ++E+ + D  +  IG    +G+SGG+KRRVSI  E++T P +LFLDEPTSGLD++ +  V+  + +L   D+   +RT++ SIHQP S +F L
Sbjct:  366 DEDAVNNFLQNEDDTLAT-LSFENITYSVPSINSDGVEETVLNEISGIVKPGQILAIMGGSGAGKTTLLDILAMKRKTG-HVSGSIKVNGISMDRKSFSKIIGFVDQDDFLLPTLTVFETVLNSALLRLPKALSFEAKKARVYKVLEELRIIDIKDRIIGNEFDRGISGGEKRRVSIACELVTSPLVLFLDEPTSGLDASNANNVIECLVRLSS-DY---NRTLVLSIHQPRSNIFYL 597          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG7_DICDI (ABC transporter G family member 7 OS=Dictyostelium discoideum GN=abcG7 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.091e-34
Identity = 98/265 (36.98%), Postives = 150/265 (56.60%), Query Frame = 3
Query:   15 SSLDHSIPVPAISRAFEVVESSSNNKTATHSINVNEDDGDGVFLTWQDLWVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAYGT-SAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGG-----WGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            S+ + S  V + +   +  + S ++   T+S+N+++ D     +  Q    T  +G+ +   +IL  ++G     E++ + GPSG GKSTLLD LA R  + T  +G+IL+NG++   AY    +YVTQD+ L+ T TV E + + A L+LP  ++   K +  E  IK++GL     ++IGG        KGLSGG+K+RVSI   ++T P LLFLDEPTSGLDS  +  VM  +  L      +   T+I SIHQP  E++ L
Sbjct:  197 SNSNSSYDVESSASGLQTPQQSRSSILPTNSLNISKIDQS---MNPQQTRSTT-NGKIEKEITILSNVSGIIEKSEMVGLFGPSGSGKSTLLDILANRKSTGTI-SGKILVNGKEIGDAYKKYCSYVTQDEILLQTSTVEETLKFHADLRLPG-LSDQDKWKVVEQVIKDIGLTKKSKSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNALKVMKVLMNLTV----IKGVTVICSIHQPRPEIYHL 451          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: SCRT_DROME (Protein scarlet OS=Drosophila melanogaster GN=st PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 1.134e-33
Identity = 91/256 (35.55%), Postives = 149/256 (58.20%), Query Frame = 3
Query:   30 SIPVPAISRAFEVVESSSNNKTAT-HSINVNEDDGDGVFLTWQDLWV-TVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRK-RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIG-GWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVF 785
            +I VP++    ++ + +S+ ++    S +       G  L W+DL V T   G  +  + I+   TG  +PG L+A+MG SG GK+TL+  LA R  + T   G+ILINGR+     +  S YV QDD  + +LTV E + + A L+L   ++K +++   +  ++  GL  A  TRIG G   K LSGG+++R++  +E+L  P +LF DEPT+GLDS ++  +++ + +L Q+       TI+ +IHQPSS++F
Sbjct:   30 TIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQK-----GTTILCTIHQPSSQLF 280          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: WHITE_DROME (Protein white OS=Drosophila melanogaster GN=w PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.935e-33
Identity = 86/203 (42.36%), Postives = 123/203 (60.59%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRL--GSNTRQAGEILINGRK--RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWG-AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            + +L+ + G A PGELLA+MG SG GK+TLL+ALA R   G     +G  L+NG+           AYV QDD  I +LT  E + + A +++P  +T  Q+  R +  I+E+ L    +T IG  G  KGLSGG+++R++   E LT P LL  DEPTSGLDS  ++ V+  + KL Q+      +T+I +IHQPSSE+F+L
Sbjct:  110 KHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQK-----GKTVILTIHQPSSELFEL 307          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 7.352e-33
Identity = 87/208 (41.83%), Postives = 127/208 (61.06%), Query Frame = 3
Query:  174 PDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILINGRKRALAY--GTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            P  +K+G +++L+ L+G     EL+ IMGPSG GKST ++ LAG   S  +  G+IL+NGR R L      S Y+ QDD L+  LTV EA+  SA L+L +      KKE     +  +GL    +TR        LSGGQ++R++I +E++  P ++F DEPTSGLDSA+ + V+S +  L Q     G RTII +IHQPS+++F++
Sbjct:   74 PCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESGMK--GQILVNGRPRELRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEKQEV--KKELVTEILTALGLMSCSHTRTAL-----LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQ-----GGRTIICTIHQPSAKLFEM 267          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: ABCG5_MOUSE (ATP-binding cassette sub-family G member 5 OS=Mus musculus GN=Abcg5 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.254e-32
Identity = 78/211 (36.97%), Postives = 123/211 (58.29%), Query Frame = 3
Query:  162 WVTVPDGQKKGNRSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEILING--RKRALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWGAKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQ 788
            W  +   Q+K +R IL+ ++ Y   G+++ I+G SG GK+TLLDA++GRL       GE+ +NG   +R       +YV Q D  +++LTV E + Y+A L L  +      K + E  + E+ L    +  IG +   G+S G++RRVSI  ++L  PK++ LDEPT+GLD   +  ++  +A+L +RD     R +I +IHQP SE+FQ
Sbjct:   55 WWNIKSCQQKWDRQILKDVSLYIESGQIMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCFSYVLQSDVFLSSLTVRETLRYTAMLALCRSSADFYNK-KVEAVMTELSLSHVADQMIGSYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANQIVLLLAELARRD-----RIVIVTIHQPRSELFQ 259          
BLAST of CX044004 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.638e-32
Identity = 84/203 (41.38%), Postives = 122/203 (60.10%), Query Frame = 3
Query:  198 RSILQGLTGYARPGELLAIMGPSGCGKSTLLDALAGRLGSNTRQAGEIL--INGRK--RALAYGTSAYVTQDDALITTLTVSEAVYYSAQLQLPDTMTKLQKKERAEMTIKEMGLQDAMNTRIGGWG-AKGLSGGQKRRVSICIEMLTRPKLLFLDEPTSGLDSAASYYVMSRIAKLDQRDHGVGSRTIIASIHQPSSEVFQL 791
            + +L+  +G A PGELLA+MG SG GK+TLL+A A R     + +   +  +NG            AYV QDD  I +LT  E + + A +++P  MT+ QK +R +  I+++ L    NT IG  G  KGLSGG+++R++   E LT P LL  DEPTSGLDS  ++ V+  + KL Q+      +T+I +IHQPSSE+F+L
Sbjct:  101 KHLLKNDSGVAYPGELLAVMGSSGAGKTTLLNASAFRSSKGVQISPSTIRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHMTQKQKVQRVDQVIQDLSLGKCQNTLIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAHSVVQVLKKLSQK-----GKTVILTIHQPSSELFEL 298          
The following BLAST results are available for this feature:
BLAST of CX044004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABCGO_DICDI3.526e-3536.68ABC transporter G family member 24 OS=Dictyosteliu... [more]
ABCG5_DICDI3.526e-3538.65ABC transporter G family member 5 OS=Dictyostelium... [more]
WHITE_LUCCU3.898e-3442.72Protein white OS=Lucilia cuprina GN=W PE=2 SV=2[more]
ADP1_YEAST5.091e-3439.08Probable ATP-dependent permease OS=Saccharomyces c... [more]
ABCG7_DICDI5.091e-3436.98ABC transporter G family member 7 OS=Dictyostelium... [more]
SCRT_DROME1.134e-3335.55Protein scarlet OS=Drosophila melanogaster GN=st P... [more]
WHITE_DROME1.935e-3342.36Protein white OS=Drosophila melanogaster GN=w PE=1... [more]
ABCG4_HUMAN7.352e-3341.83ATP-binding cassette sub-family G member 4 OS=Homo... [more]
ABCG5_MOUSE1.254e-3236.97ATP-binding cassette sub-family G member 5 OS=Mus ... [more]
WHITE_CERCA1.638e-3241.38Protein white OS=Ceratitis capitata GN=W PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14G08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14G08-N16-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX044004 ID=CX044004; Name=CX044004; organism=Citrus sinensis; type=EST; length=791bp
CTTGTTTCAGCATGTCTTCTCTTGATCACTCTATTCCTGTGCCAGCAATC
AGTAGAGCATTTGAAGTAGTGGAGAGCAGTAGTAATAATAAAACCGCAAC
TCATAGTATTAATGTTAATGAAGATGATGGAGATGGTGTTTTCTTAACTT
GGCAAGATCTGTGGGTTACGGTTCCCGATGGTCAGAAAAAAGGCAACAGA
TCAATCCTTCAAGGTCTTACTGGCTACGCAAGACCTGGGGAGCTTTTGGC
TATTATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATGCTTTAG
CTGGAAGACTAGGATCGAACACAAGGCAAGCAGGAGAAATTCTAATTAAT
GGGCGCAAACGGGCACTGGCTTATGGAACCTCGGCATATGTGACACAAGA
TGACGCTTTGATCACTACACTGACGGTTAGTGAAGCAGTGTACTACTCAG
CTCAGCTGCAATTGCCGGACACGATGACCAAATTACAGAAGAAAGAAAGA
GCAGAAATGACAATAAAAGAAATGGGGCTCCAAGATGCCATGAATACAAG
AATTGGAGGCTGGGGAGCTAAAGGCCTTAGTGGTGGTCAAAAGAGGAGAG
TTAGCATTTGCATTGAAATGTTGACTCGACCAAAGCTTCTATTTCTTGAC
GAGCCAACAAGCGGACTTGATAGTGCTGCTTCATACTATGTAATGAGCAG
GATTGCTAAGCTTGATCAAAGAGATCATGGAGTGGGATCAAGAACAATAA
TAGCATCAATCCATCAACCTAGCAGCGAAGTTTTTCAGCTT
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