CX043983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 84/273 (30.77%), Postives = 128/273 (46.89%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQ---IGNGYAPVLDCHTSHI 810 PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + + EGD + L L++A+D+ I EP R DKP +P++DV+ I G GTV GRVE G++K G V T T V VEM + L E GDN+G ++ V +D++RG V + + ++ G+ NGY P T+ + Sbjct: 83 PGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGD-----TGELGEQAIMKLMEAVDSYIPEPVRAIDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEVEIVGMKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVLAKPGSITPHTKFKAEAYILTKEEGGRHTPFFNGYRPQFYFRTTDV 340
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU_GEOTN (Elongation factor Tu OS=Geobacillus thermodenitrificans (strain NG80-2) GN=tuf PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 81/250 (32.40%), Postives = 125/250 (50.00%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK---PGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 747 PGH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D + + + EV L + + ++VP + + EGD E K L++A+D I P+R DKP +P++DV+ I G GTV GRVE G LK P ++ +T V VEM + L +A GDN+G ++ V+ +++RG V +K F +QV ++ Sbjct: 83 PGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFLNKCDMVD---DEELLELVEMEVRDLLSEYDFPGDEVPVIKGSALKALEGDAQWEE-------KIVELMNAVDEYIPTPQREVDKPFMMPVEDVFSITGRGTVATGRVERGTLKVGDPVEIIGLSDEPKSTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQVL--AKPGSITPHTKFKAQVYVL 313
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP7 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 80/253 (31.62%), Postives = 124/253 (49.01%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG-----DNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 747 PGH D++KNMITG +Q D +L++ + G QTREH LLA +GV ++ NK D + + + EV L + + + +P V S + D + + DW K L+D +D I P+R DKP + ++DV+ I G GTV GR+E G +K G +V +T V VEM + L+E L GDNVG ++ V ++++RG V +K + F +V ++ Sbjct: 83 PGHADYVKNMITGAAQMDGGILVVSAADGPMP-------QTREHILLAKQVGVPNLVVFLNKEDMVD---DEELLELVELEVRELLSEYEFPGDDIPIVKGSALKAVEALTDTPTIKKGDNDWVDKILALMDEVDAYIPTPERDIDKPFLMAIEDVFSISGRGTVATGRIERGKIKAGETVEIVGIKEKTKSTTVTGVEMFQKTLEEGLAGDNVGLLLRGVQKEEIERGMVI--AKPGSIKPHTQFEGEVYVL 323
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 88/273 (32.23%), Postives = 128/273 (46.89%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-----NHPGQIGNGYAPVLDCHTSHI 810 PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D D + EV L + G+ + P V S + + + + K L+ +D I P+RP+DK +P++DV+ I G GTV GRVETG LK G +V V VEM + L AL GDN+G ++ V +D++RG V +K F QV ++ NGY P T+ + Sbjct: 83 PGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEYIVVFLNKADQVD---DPELIDLVEMEVRELLNEYGFPGDDTPIVVGSALKALQNPDDAEAIKPIKD--LMAEVDAYIPTPERPTDKAFLMPIEDVFTITGRGTVATGRVETGTLKVGDEVEIVGMKDEITKVVVTGVEMFRKILDSALAGDNIGALLRGVQREDIERGQVL--AKPGSITPHNKFVGQVYVLKKEEGGRHTPFFNGYRPQFYFRTTDV 341
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU_CHLT3 (Elongation factor Tu OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tuf PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 86/273 (31.50%), Postives = 133/273 (48.72%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-----NHPGQIGNGYAPVLDCHTSHI 810 PGH D++KNMITG +Q D A+L++ +T G QTREH LLA + V ++ NK+D P+ + E+ + +SSY G+ + +P + +G + + +W K L++A+DN I P R DKP +P++DV+ I G GTV GR+E GV+K V T + V +EM + L + GDN G ++ V +L+RG V +K F ++V I+ NGY P T+ + Sbjct: 83 PGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVNVPSIVVFMNKVDIADPELIELVEMELRELLSSY----GFPGDDIPII-----QGSALGALNGEAEWVGKIEELMEAVDNYIPTPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGVIKINEEVELVGIRPTKKSVVTGIEMFRKLLDQGEAGDNAGLLLRGVNKDELERGMVI--AKPGSITPHTKFKAEVYILKKEEGGRHTPFFNGYRPQFYFRTTDV 337
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU_CHLMU (Elongation factor Tu OS=Chlamydia muridarum GN=tuf PE=3 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 78/227 (34.36%), Postives = 118/227 (51.98%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 681 PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + ++ D + E+S L++ GY + P + + EGD L+ A+D NI P+R DKP +P++DV+ I G GTV GR+E G++K V T E V VEM + L E G+NVG ++ + D++RG V Sbjct: 83 PGHADYVKNMITGAAQMDGAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVFLNKIDMISEEDAEL-VDLVEMELSELLEEKGY--KGCPIIRGSALKALEGDAAYIEKVR-------ELMQAVDDNIPTPEREIDKPFLMPIEDVFSISGRGTVVTGRIERGIVKVSDKVQLVGLRDTKETIVTGVEMFRKELPEGRAGENVGLLLRGIGKNDVERGMV 292
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU_CHAVU (Elongation factor Tu, chloroplastic OS=Chara vulgaris GN=tufA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 84/255 (32.94%), Postives = 126/255 (49.41%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS-----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 747 PGH D+IKNMITG +Q D A+L++ + G QT+EH LLA +GV ++ NK D + D EV L + +KVP V S + N W K L+DA+D+ I PKR +KP +P++DV+ I G GTV GR+E G+LK G +V GL +++S +EM L++ G+N+G ++ + KD++RG V ++ F +QV I+ Sbjct: 83 PGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTKEHILLAKQVGVPSIVVFLNKEDQVDDEEILQLVD---LEVRESLINYEFPGDKVPVVAGSALMALQALTEKPNTLRGENKWVDKIYELMDAVDSYIPTPKRDIEKPFLMPIEDVFSIQGRGTVATGRIERGILKLGDIVEL--IGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGIEKKDIERGMVI--AQPGTIEPHTRFEAQVYIL 323
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU_CAMLR (Elongation factor Tu OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=tuf PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 86/284 (30.28%), Postives = 134/284 (47.18%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN-----HPGQIGNGYAPVLDCHTSHI--AVKFSE 828 PGH D++KNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK D A E+V+ E+ L + + P + S + + + +W K +LD + D I P R +DK +P++DV+ I G GTV GR+E GV+K G + TT V VEM + + + GDNVG ++ +D++RG V + K +F ++V I+N N Y P T+ + A+K +E Sbjct: 83 PGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFMNKADMV----DDAELLELVEMEIRELLSSYDFPGDDTPIISGSALQALEEAKAGQDGEWSK--KILDLMAAVDDYIPTPARDTDKDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIRDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEDVERGMVLAKPKS--ITPHTDFEAEVYILNKDEGGRHTPFFNNYRPQFYVRTTDVTGAIKLAE 351
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU2_YERPS (Elongation factor Tu 2 OS=Yersinia pseudotuberculosis GN=tuf2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 87/253 (34.39%), Postives = 125/253 (49.41%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGD-----NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 750 PGH D++KNMITG +Q D A+L++ +T G QTREH LL +GV +I NK D + + V+E+ S G + V + EG+ +IE + LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + +D++RG V +K + F S+V I++ Sbjct: 83 PGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLGRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSAYDFPGDDLPVVRGSALKALEGEAEWEAKIIELAGYLDSY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVL--AKPGSIKPHTTFESEVYILS 313
BLAST of CX043983 vs. ExPASy Swiss-Prot
Match: EFTU2_YERPN (Elongation factor Tu 2 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=tuf2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.123e-25 Identity = 87/253 (34.39%), Postives = 125/253 (49.41%), Query Frame = 1 Query: 19 PGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGD-----NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 750 PGH D++KNMITG +Q D A+L++ +T G QTREH LL +GV +I NK D + + V+E+ S G + V + EG+ +IE + LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + +D++RG V +K + F S+V I++ Sbjct: 83 PGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLGRQVGVPYIIVFMNKCDMVDDEELLELVEMEVRELLSAYDFPGDDLPVVRGSALKALEGEAEWEAKIIELAGYLDSY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREDIERGQVL--AKPGSIKPHTTFESEVYILS 313 The following BLAST results are available for this feature:
BLAST of CX043983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043983 ID=CX043983; Name=CX043983; organism=Citrus sinensis; type=EST; length=832bpback to top |