CX043956

Overview
NameCX043956
Unique NameCX043956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C12A2_MUSDO (Cytochrome P450 CYP12A2 OS=Musca domestica GN=CYP12A2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11
Identity = 47/158 (29.75%), Postives = 76/158 (48.10%), Query Frame = -1 
Query:  332 LALAQLKEEHDEIRAKKSK---QEPLEWND--YKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-----QNNSGATSP-------VNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 754
            L LA+  E+  ++R +  +   Q+  E+N+  +K+MP+ +  + E+LRV  +  G  R    D+ I GY +PKG  +  +   +  D  H+  A  F P RW     +N   A  P         V+ PFG G R C G  +A +EL + +  L+  F
Sbjct:  347 LCLAKNPEKQKKLREEIMQLLPQKDSEFNEAVFKNMPYLRACIKESLRVYPLTVGNARTQANDVVISGYRVPKGTLISMNSVTLIKDDAHYPRASEFLPERWLRASKENEKSAECPHALKASSPFVYLPFGFGSRSCIGRRIAEMELELGIARLIRNF 504
The following BLAST results are available for this feature:
BLAST of CX043956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
C12A2_MUSDO7.963e-1129.75Cytochrome P450 CYP12A2 OS=Musca domestica GN=CYP1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E05-J10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043956 ID=CX043956; Name=CX043956; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCACAAAAAGGAAATAAAATGATTACTATTAATC
ATTACTACAGCAGCTTGATTAAAACATATGAACATGATAATTTACATAAA
CTATTCTGCTAACATAAAATTTATTAAATTTGACATAAATAGTTGATTAC
ATTAGATGATACATCATCTCCTCTAGCATTCTCTTACTCCATCCTTCCTT
GCTTGCTTCTCTCTTTATTCTTTACATGGCTTTTAATTCTCATTTCGACG
CTGCACAATGATGGGGTACCTCTTCTGCGTTCTTGTTGTTGGAAAGAATA
CCAACTTATCTTGCTCAGCTGGTACCCAGCTGAAACGAGTAACTAAGTGG
TGAAGAAAAACAGAGAGCTCAACCCTCGCAAGTTCATATCCAGGGCACAG
CCGTGGCCCACCGCCGAACGGAGTGAATACATTTACTGGACTCGTTGCTC
CTGAATTATTCTGCCATCTCCATGGGTTGAAAGAGCGAGCATCTTTGAAA
TGGTCATGGTCTAAATGTACAGCCCTGAATGATGCAAAAACTCTCCACCC
CTTTGGTATAGTGTAACCTTTAATGTTGATATCTGTCATTGCTCTCCTGA
AAACCCCACTGATTATGTTGGCCACTCTCAGAGTTTCATTGACAACACAT
TGAGTGAATGGCATTGACTTATAATCATTCCATTCGAGAGGCTCTTGCTT
GCTCTTCTTTGCCCTTATCTCATCATGCTCCTCCTTTAGTTGAGCCAAAG
CTAGAGGAGTCTCAGTGAGGAACTTAACAGCAAGAGTCATGAT
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