CX043956

Overview
NameCX043956
Unique NameCX043956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C16B2_PICSI (Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP716B2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.035e-26
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  326 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 790
            +T+ +KFL E P    ++  E  +I   K   + LEW D + M ++  V  E LR+     G FR+A+ +    G+TIPKGW+++ +  + H   ++F +  +F+P R++   G   P   F PFGGGPR+CPG E AR+E+ VFLH++V    W
Sbjct:  313 LTVLLKFLAENPHCYEEVLREQLDIAGSKEAGQLLEWEDLQRMKYSWRVAQEALRLFPAAQGSFRKAIKEFIYDGFTIPKGWKMYWTVNSTHRKSEYFSNPETFDPSRFE---GEGPPPYTFVPFGGGPRMCPGNEFARLEILVFLHNIVKNCKW 464          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: KAO1_HORVU (Ent-kaurenoic acid oxidase 1 OS=Hordeum vulgare GN=KAO1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.352e-26
Identity = 64/148 (43.24%), Postives = 88/148 (59.46%), Query Frame = -1
Query:  341 AVKFLTETPLALAQLKEEHDEI-RAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLV 781
            A  FL E P  LA+ K E + I R+    Q+ L   D++ M +   VV+ETLR  NI    FR+A  D+ + GY IPKGW+V   +R+VH+D   + D + F+P RW+   G       F PFG G RLCPG +LA++E+SVFLHH +
Sbjct:  317 ATVFLQENPEILAKAKAEQEAIMRSIPPGQKGLTLRDFRKMAYLSQVVDETLRFVNISFVSFRQATRDVFVNGYLIPKGWKVQLWYRSVHMDPQVYPDPKKFDPSRWE---GPPPRAGTFLPFGLGTRLCPGNDLAKLEISVFLHHFL 461          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: T5H_TAXCU (Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.710e-26
Identity = 60/165 (36.36%), Postives = 92/165 (55.76%), Query Frame = -1
Query:  299 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF-SWVPAEQDKLV 790
            M L  K L+  P    ++ +E  EI + K + E + W D K+M +T  V  ETLR+   + G FR+A+TDI   GYTIPKGW++  +  + H    +F +   F P R+       +P   F PFGGG R C G+E +++E+ +F+HH V  F S+ P + D+ +
Sbjct:  315 MALIFKLLSSNPECYQKVVQEQLEILSNKEEGEEITWKDLKAMKYTWQVAQETLRMFPPVFGTFRKAITDIQYDGYTIPKGWKLLWTTYSTHPKDLYFNEPEKFMPSRFDQEGKHVAPY-TFLPFGGGQRSCVGWEFSKMEILLFVHHFVKTFSSYTPVDPDEKI 478          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C88A1_MAIZE (Cytochrome P450 88A1 OS=Zea mays GN=CYP88A1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.145e-25
Identity = 62/148 (41.89%), Postives = 87/148 (58.78%), Query Frame = -1
Query:  341 AVKFLTETPLALAQLKEEHDEI-RAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLV 781
            A  FL E P   A+ K E + I R+  S Q  L   D++ M +   V++ETLR+ NI    FR+A  D+ + GY IPKGW+V   +R+VH+D   + D   F+P RW+   G +     F  FG G RLCPG +LA++E+SVFLHH +
Sbjct:  340 ATVFLQENPDMFARAKAEQEAIMRSIPSSQRGLTLRDFRKMEYLSQVIDETLRLVNISFVSFRQATRDVFVNGYLIPKGWKVQLWYRSVHMDPQVYPDPTKFDPSRWE---GHSPRAGTFLAFGLGARLCPGNDLAKLEISVFLHHFL 484          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2R1_HUMAN (Vitamin D 25-hydroxylase OS=Homo sapiens GN=CYP2R1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.083e-19
Identity = 52/155 (33.55%), Postives = 83/155 (53.55%), Query Frame = -1
Query:  332 IMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 793
            ++  A+ F+   P    Q+++E D I     K     W+D   MP+T+ V++E LR  NI+  G+F     D  ++GY+IPKG  V  +  +VH D  +++D   F+P R+ ++SG  +      PF  G R C G  LAR+E+ +F   L+ RF
Sbjct:  318 VLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPS---WDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 469          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP120_SYNY3 (Putative cytochrome P450 120 OS=Synechocystis sp. (strain PCC 6803) GN=cyp120 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.770e-18
Identity = 54/164 (32.93%), Postives = 82/164 (50.00%), Query Frame = -1
Query:  281 LALAQLKEEHDEIRAKKSK---QEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGAT-SPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW--VPAEQDKLVFFPTTR 754
            L L Q  +  + +R +++K    + L     K MP+   V+ E LR+   + G FR  + D   +G+  PKGW V       H D D + D   F+P R+  +  AT +P     PFGGG R C G E AR+E+ +F   L+ +F W  +P +  +LV  P+ R
Sbjct:  268 LLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPR 431          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP26A_XENLA (Cytochrome P450 26A1 OS=Xenopus laevis GN=cyp26a1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.711e-17
Identity = 47/131 (35.88%), Postives = 66/131 (50.38%), Query Frame = -1
Query:  326 IRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 718
            +  K  +++ L     + + +T CV+ ETLR++  ++G FR A+    + GY IPKGW V  S    H + D F D   FNP R+       S    F PFGGG R C G E A++ L VF+  L     W
Sbjct:  330 LSTKPEEKKELSIEVLQQLKYTSCVIKETLRLSPPVAGGFRVALKTFVLNGYQIPKGWNVIYSIADTHGEADLFPDTDKFNPDRFLTPLPRDSSRFGFIPFGGGVRCCIGKEFAKILLKVFVVELCRNCDW 460          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP26A_CHICK (Cytochrome P450 26A1 OS=Gallus gallus GN=CYP26A1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.268e-16
Identity = 47/126 (37.30%), Postives = 65/126 (51.59%), Query Frame = -1
Query:  326 SKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 703
            ++++ L     + + +T CV+ ETLR++  + G FR A+  + + GY IPKGW V  S    H   D F D   FNP R+ + S   S    F PFGGG R C G E A+V L +F   L     W
Sbjct:  335 NQEKQLNMEFLEQLKYTGCVIKETLRLSPPVPGGFRIALKTLELNGYQIPKGWNVIYSICDTHDVADLFTDKDEFNPDRFMSPSPEDSSRFSFIPFGGGLRSCVGKEFAKVLLKIFTVELARSCDW 460          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2R1_MOUSE (Vitamin D 25-hydroxylase OS=Mus musculus GN=Cyp2r1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.690e-16
Identity = 49/155 (31.61%), Postives = 80/155 (51.61%), Query Frame = -1
Query:  332 IMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 793
            ++  A+ F+   P    Q+ +E D I     +     W     MP+T+ V++E LR  NI+  G+F     D  ++GY+IPKG  V  +  +VH D  ++KD   F P R+ +++G  +      PF  G R C G +LAR+E+ +F   L+ +F
Sbjct:  318 VLRWAILFMALYPNIQGQVHKEIDLIVGHNRRPS---WEYKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWKDPDMFYPERFLDSNGYFTKKEALIPFSLGRRHCLGEQLARMEMFLFFTSLLQQF 469          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2F2_MOUSE (Cytochrome P450 2F2 OS=Mus musculus GN=Cyp2f2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.820e-16
Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = -1
Query:  320 AVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVP 781
            A   L + P   A+++EE D +   +S+   LE  D  SMP+T  V++E  R A++I   +  R   D   +G+ IPKG  V      VH D D FK  + FNP  + +++ +      F PF  G RLC G  LAR+EL ++   ++  F+  P
Sbjct:  310 AFLILMKYPKVQARVQEEIDRV-VGRSRMPTLE--DRTSMPYTDAVIHEVQRFADVIPMNLPHRVTRDTPFRGFLIPKGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDDNHSFKKSPAFMPFSAGRRLCLGEPLARMELFIYFTSILQNFTLQP 461          
The following BLAST results are available for this feature:
BLAST of CX043956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
C16B2_PICSI1.035e-2636.77Cytochrome P450 716B2 OS=Picea sitchensis GN=CYP71... [more]
KAO1_HORVU1.352e-2643.24Ent-kaurenoic acid oxidase 1 OS=Hordeum vulgare GN... [more]
T5H_TAXCU6.710e-2636.36Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata P... [more]
C88A1_MAIZE1.145e-2541.89Cytochrome P450 88A1 OS=Zea mays GN=CYP88A1 PE=2 S... [more]
CP2R1_HUMAN6.083e-1933.55Vitamin D 25-hydroxylase OS=Homo sapiens GN=CYP2R1... [more]
CP120_SYNY31.770e-1832.93Putative cytochrome P450 120 OS=Synechocystis sp. ... [more]
CP26A_XENLA9.711e-1735.88Cytochrome P450 26A1 OS=Xenopus laevis GN=cyp26a1 ... [more]
CP26A_CHICK1.268e-1637.30Cytochrome P450 26A1 OS=Gallus gallus GN=CYP26A1 P... [more]
CP2R1_MOUSE3.690e-1631.61Vitamin D 25-hydroxylase OS=Mus musculus GN=Cyp2r1... [more]
CP2F2_MOUSE4.820e-1633.55Cytochrome P450 2F2 OS=Mus musculus GN=Cyp2f2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E05-J10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043956 ID=CX043956; Name=CX043956; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCACAAAAAGGAAATAAAATGATTACTATTAATC
ATTACTACAGCAGCTTGATTAAAACATATGAACATGATAATTTACATAAA
CTATTCTGCTAACATAAAATTTATTAAATTTGACATAAATAGTTGATTAC
ATTAGATGATACATCATCTCCTCTAGCATTCTCTTACTCCATCCTTCCTT
GCTTGCTTCTCTCTTTATTCTTTACATGGCTTTTAATTCTCATTTCGACG
CTGCACAATGATGGGGTACCTCTTCTGCGTTCTTGTTGTTGGAAAGAATA
CCAACTTATCTTGCTCAGCTGGTACCCAGCTGAAACGAGTAACTAAGTGG
TGAAGAAAAACAGAGAGCTCAACCCTCGCAAGTTCATATCCAGGGCACAG
CCGTGGCCCACCGCCGAACGGAGTGAATACATTTACTGGACTCGTTGCTC
CTGAATTATTCTGCCATCTCCATGGGTTGAAAGAGCGAGCATCTTTGAAA
TGGTCATGGTCTAAATGTACAGCCCTGAATGATGCAAAAACTCTCCACCC
CTTTGGTATAGTGTAACCTTTAATGTTGATATCTGTCATTGCTCTCCTGA
AAACCCCACTGATTATGTTGGCCACTCTCAGAGTTTCATTGACAACACAT
TGAGTGAATGGCATTGACTTATAATCATTCCATTCGAGAGGCTCTTGCTT
GCTCTTCTTTGCCCTTATCTCATCATGCTCCTCCTTTAGTTGAGCCAAAG
CTAGAGGAGTCTCAGTGAGGAACTTAACAGCAAGAGTCATGAT
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