CX043956

Overview
NameCX043956
Unique NameCX043956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2DI_RAT (Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d18 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14
Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = -1
Query:  305 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQDK 790
            +T A+ F+   P    ++++E DE+  +  + E     D   MPFT  V++E  R A+I+  GV  +   DI ++G+ IPKG  +  +  +V  D   ++    F+P  + +  G       F PF  G R C G  LAR+EL +F   L+ RFS+ VPA Q +
Sbjct:  317 LTWALLFMILRPDVQCRVQQEIDEVIGQVRRPEMA---DQARMPFTNAVIHEVQRFADILPLGVPHKTSRDIEVQGFLIPKGTTLIINLSSVLKDETVWEKPLRFHPEHFLDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAGQPR 477          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2A4_MOUSE (Cytochrome P450 2A4 OS=Mus musculus GN=Cyp2a4 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.511e-14
Identity = 43/133 (32.33%), Postives = 69/133 (51.88%), Query Frame = -1
Query:  332 HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 727
            H+EI     +    ++ D   MP+T+ V++E  R A++I  G+ RR   D   + + +PKG  VF    +V  D   F + + FNP  + ++ G     + F PF  G R C G  LAR+EL +FL +++  F
Sbjct:  328 HEEIDRVIGRNRQPKYEDRMKMPYTEAVIHEIQRFADLIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNF 460          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2J2_HUMAN (Cytochrome P450 2J2 OS=Homo sapiens GN=CYP2J2 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.892e-14
Identity = 44/124 (35.48%), Postives = 64/124 (51.61%), Query Frame = -1
Query:  302 KSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 670
            +SMP+T  V++E  R+ NII   V R    D  + GY +PKG  +  +  A+H D   +    +FNP  +  N G       F PF  G R C G +LAR EL +F   L+ +F++ P   +KL
Sbjct:  357 ESMPYTNAVIHEVQRMGNIIPLNVPREVTVDTTLAGYHLPKGTMILTNLTALHRDPTEWATPDTFNPDHFLEN-GQFKKREAFMPFSIGKRACLGEQLARTELFIFFTSLMQKFTFRPPNNEKL 479          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2A5_MOUSE (Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.892e-14
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = -1
Query:  287 HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW--VPAEQD-----KLVFFPT 727
            H+EI     +    ++ D   MP+T+ V++E  R A++I  G+ RR   D   + + +PKG  VF    +V  D   F + + FNP  + ++ G     + F PF  G R C G  LAR+EL +FL +++  F +    A QD     +LV F T
Sbjct:  328 HEEIDRVIGRNRQPKYEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDKGQFKKNDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNFHFKSTQAPQDIDVSPRLVGFAT 482          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.695e-14
Identity = 45/146 (30.82%), Postives = 73/146 (50.00%), Query Frame = -1
Query:  302 KEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 736
            K+  DEI      + P  ++    M +   V+NETLR+  I + + R    D+ + G  IPKG  V     A+H D  H+ +   F P R+ + N G+  P  V+ PFG GPR C G   A + + + L  ++  FS+ P ++ ++
Sbjct:  330 KKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPEEFQPERFSKENKGSIDPY-VYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQPCKETQI 474          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2J6_MOUSE (Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.695e-14
Identity = 46/126 (36.51%), Postives = 65/126 (51.59%), Query Frame = -1
Query:  302 DYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 676
            D +SMP+T  V++E  R+ NII   V R    D N+ G+ +PKG  V  +  A+H D   +     FNP  +  N G       F PF  G R C G +LAR EL +F   L+ +F++ P   +KL
Sbjct:  354 DRESMPYTNAVIHEVRRMGNIIPLNVPREVAMDTNLNGFHLPKGTMVLTNLTALHRDPKEWATPDVFNPEHFLEN-GQFKKRESFLPFSMGKRACLGEQLARSELFIFFTSLMQKFTFNPPINEKL 478          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2A3_RAT (Cytochrome P450 2A3 OS=Rattus norvegicus GN=Cyp2a3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.695e-14
Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = -1
Query:  332 HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 727
            H+EI     +    ++ D   MP+T+ V++E  R A++I  G+ RR   D   + + +PKG  VF    +V  D   F +   FNP  + ++ G     + F PF  G R C G  LAR+EL +FL +++  F
Sbjct:  328 HEEIDRVIGRNRQAKYEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKFREFLLPKGTEVFPMLGSVLKDPKFFSNPNDFNPKHFLDDKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNF 460          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.005e-13
Identity = 52/175 (29.71%), Postives = 83/175 (47.43%), Query Frame = -1
Query:  251 LTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK--LVFFPTTRTQKRYPIIVQ 769
            LT  P    +L+EE D     K+   P  ++    M +   VVNETLR+  I   + R    D+ I G TIPKG  V      +H + + + +   F P R+  N+  +    V+ PFG GPR C G   A + + + L  ++  FS+ P ++ +  L  +    TQ   P+I++
Sbjct:  321 LTTHPHVQQKLQEEIDATFPNKA---PPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPEPEEFRPERFSKNNKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFKPCKETQIPLKLYTQGLTQPEQPVILK 492          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2DG_CAVPO (Cytochrome P450 2D16 OS=Cavia porcellus GN=CYP2D16 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.313e-13
Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = -1
Query:  305 EWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQDK 685
            E  D   MPFT  V++E  R A+I+  GV      D  ++G+ IPKG  +F +  +V  D   ++    F+P  + +  G       F PF  GPR+C G  LAR+EL +F   L+ RFS+ VP  Q +
Sbjct:  349 EMADQAHMPFTNAVIHEVQRFADIVPMGVPHMTSRDTEVQGFLIPKGTMLFTNLSSVLKDETVWEKPLHFHPGHFLDAEGRFVKREAFMPFSAGPRICLGEPLARMELFLFFTSLLQRFSFSVPEGQPR 477          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2D4_RAT (Cytochrome P450 2D4 OS=Rattus norvegicus GN=Cyp2d4 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.313e-13
Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = -1
Query:  305 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQDK 790
            +T A+ F+   P    ++++E DE+  +  + E     D   MPFT  V++E  R A+I+  GV  +   DI ++G+ IPKG  +  +  +V  D   ++    F+P  + +  G       F PF  G R C G  LAR+EL +F   L+ RFS+ VP  Q +
Sbjct:  317 LTWALLFMILHPDVQCRVQQEIDEVIGQVRRPEMA---DQARMPFTNAVIHEVQRFADILPLGVPHKTSRDIEVQGFLIPKGTTLITNLSSVLKDETVWEKPLRFHPEHFLDAQGNFVKHEAFMPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPTGQPR 477          
The following BLAST results are available for this feature:
BLAST of CX043956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
CP2DI_RAT4.511e-1432.32Cytochrome P450 2D18 OS=Rattus norvegicus GN=Cyp2d... [more]
CP2A4_MOUSE4.511e-1432.33Cytochrome P450 2A4 OS=Mus musculus GN=Cyp2a4 PE=2... [more]
CP2J2_HUMAN5.892e-1435.48Cytochrome P450 2J2 OS=Homo sapiens GN=CYP2J2 PE=1... [more]
CP2A5_MOUSE5.892e-1432.26Cytochrome P450 2A5 OS=Mus musculus GN=Cyp2a5 PE=2... [more]
CP3AB_MOUSE7.695e-1430.82Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP2J6_MOUSE7.695e-1436.51Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2... [more]
CP2A3_RAT7.695e-1432.33Cytochrome P450 2A3 OS=Rattus norvegicus GN=Cyp2a3... [more]
CP3AS_BOVIN1.005e-1329.71Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP2DG_CAVPO1.313e-1335.66Cytochrome P450 2D16 OS=Cavia porcellus GN=CYP2D16... [more]
CP2D4_RAT1.313e-1331.71Cytochrome P450 2D4 OS=Rattus norvegicus GN=Cyp2d4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E05-J10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043956 ID=CX043956; Name=CX043956; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCACAAAAAGGAAATAAAATGATTACTATTAATC
ATTACTACAGCAGCTTGATTAAAACATATGAACATGATAATTTACATAAA
CTATTCTGCTAACATAAAATTTATTAAATTTGACATAAATAGTTGATTAC
ATTAGATGATACATCATCTCCTCTAGCATTCTCTTACTCCATCCTTCCTT
GCTTGCTTCTCTCTTTATTCTTTACATGGCTTTTAATTCTCATTTCGACG
CTGCACAATGATGGGGTACCTCTTCTGCGTTCTTGTTGTTGGAAAGAATA
CCAACTTATCTTGCTCAGCTGGTACCCAGCTGAAACGAGTAACTAAGTGG
TGAAGAAAAACAGAGAGCTCAACCCTCGCAAGTTCATATCCAGGGCACAG
CCGTGGCCCACCGCCGAACGGAGTGAATACATTTACTGGACTCGTTGCTC
CTGAATTATTCTGCCATCTCCATGGGTTGAAAGAGCGAGCATCTTTGAAA
TGGTCATGGTCTAAATGTACAGCCCTGAATGATGCAAAAACTCTCCACCC
CTTTGGTATAGTGTAACCTTTAATGTTGATATCTGTCATTGCTCTCCTGA
AAACCCCACTGATTATGTTGGCCACTCTCAGAGTTTCATTGACAACACAT
TGAGTGAATGGCATTGACTTATAATCATTCCATTCGAGAGGCTCTTGCTT
GCTCTTCTTTGCCCTTATCTCATCATGCTCCTCCTTTAGTTGAGCCAAAG
CTAGAGGAGTCTCAGTGAGGAACTTAACAGCAAGAGTCATGAT
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