CX043956

Overview
NameCX043956
Unique NameCX043956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2A8_MESAU (Cytochrome P450 2A8 OS=Mesocricetus auratus GN=CYP2A8 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.313e-13
Identity = 44/147 (29.93%), Postives = 73/147 (49.66%), Query Frame = -1
Query:  332 LTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 769
            L + P   A++ EE D++  +  + +   + D+  MP+T+ V+ E  R  +++  G+ R    DI  + + IPKG  VF    +V  D   F +   FNP  + ++ G     N F PF  G R C G  LA++EL +F   ++  F
Sbjct:  317 LMKYPHIAAKMHEEIDQVIGRNRQPK---YEDHLKMPYTEAVIYEIQRFVDVVPLGLPRSTTKDIKFRDFLIPKGTDVFPVLSSVLKDPKFFSNPNDFNPQHFSDDKGQFKKSNAFMPFSVGKRYCFGESLAKMELFIFFTTIMQNF 460          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2J1_RABIT (Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CYP2J1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.714e-13
Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = -1
Query:  302 HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 727
            H EI +   + +       +S+P+T  V++E  R+ NI+   V R    D  + GY +PKG  V  +  A+H D + +    +FNP  +  N G       F PF  G R C G +LA+ EL +F   L+ +F++ P   +KL
Sbjct:  337 HAEIDSVIGQWQQPSMASRESLPYTNAVIHEVQRMGNILPLNVPREVTVDTTLAGYHLPKGTVVLTNLTALHKDPEEWATPDTFNPEHFLEN-GQFKKKEAFIPFSIGKRACLGEQLAKSELFIFFTSLMQKFTFKPPSDEKL 478          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP239_MOUSE (Cytochrome P450 2C39 OS=Mus musculus GN=Cyp2c39 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.714e-13
Identity = 50/160 (31.25%), Postives = 78/160 (48.75%), Query Frame = -1
Query:  305 AVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK 781
            A+  L + P   A+++EE D +  +   + P    D   MP+T  +++E  R  N++     RA+T DI  + Y IPKG  V  S  +V  D   F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F   P    K
Sbjct:  309 ALLLLMKYPDVTAKVQEEIDHVIGRH--RSPC-MQDRNHMPYTDAMIHEVQRFINLVPNNIPRAVTCDIKFRNYLIPKGTTVVTSLTSVLHDSKEFPNPELFDPGHFLDANGNFKKSDHFMPFSAGKRVCAGEGLARMELFLFLTTILQNFKLKPLVHPK 465          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.239e-13
Identity = 44/145 (30.34%), Postives = 70/145 (48.28%), Query Frame = -1
Query:  302 KEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 736
            K+  DEI A    + P  ++    M +   VVNETLR+  I   + R   TD+ I G  IPKG  V     A+H D  ++ +   F P R+   +  +    ++ PFG GPR C G   A + + V L  ++  F+  P ++ ++
Sbjct:  329 KKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEI 473          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP343_HUMAN (Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.239e-13
Identity = 46/156 (29.49%), Postives = 75/156 (48.08%), Query Frame = -1
Query:  302 LTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 769
            L   P    +L+EE D +   K+   P+ ++    M +   VVNETLR+  ++S V R    DI I G  IPKG  V     A+H D  ++ +   F P R+   +  +  +  + PFG GPR C G   A   + + +   +  FS+ P ++ ++
Sbjct:  321 LATHPDVQQKLQEEIDAVLPNKA---PVTYDALVQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPERFSKKNKDSIDLYRYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSFKPCKETQI 473          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2DJ_CALJA (Cytochrome P450 2D19 OS=Callithrix jacchus GN=CYP2D19 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.239e-13
Identity = 48/148 (32.43%), Postives = 78/148 (52.70%), Query Frame = -1
Query:  305 QLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW-VPAEQDK 742
            ++++E D++  +  + E     D   MP+T  V++E  R A+I+  GV      DI ++G+ IPKG  +F +  +V  D  +++    F+P  + +  G       F PF  G R C G  LAR+EL +F   L+ RFS+ VPA Q +
Sbjct:  330 RVQQEIDDVIGRVRRPE---MGDQTYMPYTTAVIHEVQRFADIVPLGVTHMTSRDIEVQGFLIPKGTTLFTNLSSVLKDEANWEKPFRFHPEHFLDAQGRFVKPEAFLPFSAGRRACLGEPLARMELFLFFTCLLQRFSFSVPAGQPR 474          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.924e-13
Identity = 46/160 (28.75%), Postives = 76/160 (47.50%), Query Frame = -1
Query:  251 DEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTR--TQKRYPIIVQ 724
            +EI A    + P  ++    M +   VVNETLR+  I + + R    D+ I G  +PKG  V      +H D D + +   F P R+      T     + PFG GPR C G   A + + + L  ++  FS+ P ++ ++    TT+  TQ   P++++
Sbjct:  333 EEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFKPCKETQIPLKLTTQGLTQPEKPVVLK 492          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.924e-13
Identity = 52/158 (32.91%), Postives = 79/158 (50.00%), Query Frame = -1
Query:  326 IMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVF-RRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNV-FTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 793
            I+  A+  L + P  LA+L+EE D +  + S    ++ + +  +P+ Q  V ET+R+   IS +   R M    + GYTIPKG  V  +  A+  D   +KD   F P R+ ++    +     F PFG G R+CPG  LA   + + L  LV  F W
Sbjct:  298 IIEWALAQLIKNPDKLAKLREELDRVVGRSST---VKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGW 452          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.819e-13
Identity = 46/156 (29.49%), Postives = 75/156 (48.08%), Query Frame = -1
Query:  302 LTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 769
            L   P    +L+EE D +   K+   P  ++    M +   VVNETLR+  +   + R    D+ I G  IPKG  V     A+H D  ++ +   F P R+  N+       ++TPFG GPR C G   A + + + L  ++  FS+ P ++ ++
Sbjct:  321 LATHPDVQQKLQEEIDAVLPNKA---PATYDTVLQMEYLDMVVNETLRLFPLAMRLERVCKKDVEINGVFIPKGVVVMIPSYALHYDPKYWTEPEKFLPERFSKNNKDNIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQI 473          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2CJ_HUMAN (Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.819e-13
Identity = 47/152 (30.92%), Postives = 76/152 (50.00%), Query Frame = -1
Query:  329 AVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 781
            A+  L + P   A+++EE + +  +   + P    D   MP+T  VV+E  R  ++I      A+T D+  + Y IPKG  +  S  +V  D+  F +   F+P  + +  G     N F PF  G R+C G  LAR+EL +FL  ++  F+
Sbjct:  309 ALLLLLKHPEVTAKVQEEIERVVGRN--RSPC-MQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGLARMELFLFLTFILQNFN 457          
The following BLAST results are available for this feature:
BLAST of CX043956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
CP2A8_MESAU1.313e-1329.93Cytochrome P450 2A8 OS=Mesocricetus auratus GN=CYP... [more]
CP2J1_RABIT1.714e-1331.47Cytochrome P450 2J1 OS=Oryctolagus cuniculus GN=CY... [more]
CP239_MOUSE1.714e-1331.25Cytochrome P450 2C39 OS=Mus musculus GN=Cyp2c39 PE... [more]
CP3AD_MOUSE2.239e-1330.34Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]
CP343_HUMAN2.239e-1329.49Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE... [more]
CP2DJ_CALJA2.239e-1332.43Cytochrome P450 2D19 OS=Callithrix jacchus GN=CYP2... [more]
CP3AT_PIG2.924e-1328.75Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
C80A1_BERST2.924e-1332.91Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
CP3AL_CALJA3.819e-1329.49Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3... [more]
CP2CJ_HUMAN3.819e-1330.92Cytochrome P450 2C19 OS=Homo sapiens GN=CYP2C19 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E05-J10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043956 ID=CX043956; Name=CX043956; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCACAAAAAGGAAATAAAATGATTACTATTAATC
ATTACTACAGCAGCTTGATTAAAACATATGAACATGATAATTTACATAAA
CTATTCTGCTAACATAAAATTTATTAAATTTGACATAAATAGTTGATTAC
ATTAGATGATACATCATCTCCTCTAGCATTCTCTTACTCCATCCTTCCTT
GCTTGCTTCTCTCTTTATTCTTTACATGGCTTTTAATTCTCATTTCGACG
CTGCACAATGATGGGGTACCTCTTCTGCGTTCTTGTTGTTGGAAAGAATA
CCAACTTATCTTGCTCAGCTGGTACCCAGCTGAAACGAGTAACTAAGTGG
TGAAGAAAAACAGAGAGCTCAACCCTCGCAAGTTCATATCCAGGGCACAG
CCGTGGCCCACCGCCGAACGGAGTGAATACATTTACTGGACTCGTTGCTC
CTGAATTATTCTGCCATCTCCATGGGTTGAAAGAGCGAGCATCTTTGAAA
TGGTCATGGTCTAAATGTACAGCCCTGAATGATGCAAAAACTCTCCACCC
CTTTGGTATAGTGTAACCTTTAATGTTGATATCTGTCATTGCTCTCCTGA
AAACCCCACTGATTATGTTGGCCACTCTCAGAGTTTCATTGACAACACAT
TGAGTGAATGGCATTGACTTATAATCATTCCATTCGAGAGGCTCTTGCTT
GCTCTTCTTTGCCCTTATCTCATCATGCTCCTCCTTTAGTTGAGCCAAAG
CTAGAGGAGTCTCAGTGAGGAACTTAACAGCAAGAGTCATGAT
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