CX043956

Overview
NameCX043956
Unique NameCX043956
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2C7_RAT (Cytochrome P450 2C7 OS=Rattus norvegicus GN=Cyp2c7 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.819e-13
Identity = 47/152 (30.92%), Postives = 76/152 (50.00%), Query Frame = -1
Query:  329 AVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFS 781
            A+  L + P   A+++EE D +  +   + P    D K MP+T  +++E  R  N +      A+T DI  + Y IPKG +V  S  +V  D   F +   F+P  + + +G     + F PF  G R C G  LAR++L +FL  ++  F+
Sbjct:  309 ALLLLMKYPHVTAKVQEEIDRVIGRH--RSPC-MQDRKHMPYTDAMIHEVQRFINFVPTNLPHAVTCDIKFRNYLIPKGTKVLTSLTSVLHDSKEFPNPEMFDPGHFLDENGNFKKSDYFLPFSAGKRACVGEGLARMQLFLFLTTILQNFN 457          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2A2_RAT (Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.819e-13
Identity = 40/133 (30.08%), Postives = 68/133 (51.13%), Query Frame = -1
Query:  332 HDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRF 727
            H+EI     +    ++ D+  MP+TQ V+NE  R +N+   G+ RR + +   +G+ +PKG  VF    ++  +   F + + FNP  + ++ G       F PF  G R C G  LA++EL + L  ++  F
Sbjct:  326 HEEIERVIGRNRQPQYEDHMKMPYTQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPIIGSLMTEPKFFPNHKDFNPQHFLDDKGQLKKNAAFLPFSIGKRFCLGDSLAKMELFLLLTTILQNF 458          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.819e-13
Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = -1
Query:  326 IMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVF-RRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNV-FTPFGGGPRLCPGYELARVELSVFLHHLVTRFSW 793
            +MT  + +L   P  + + + E  E+   K+K + +E  D + + + + VV ET RV  ++  +  R A  D+ I GY IPK   +  +  A+H + + +KD  +F P R+ +N      +N  F PFG G R+CPG  +    + + L +L+ RF W
Sbjct:  305 VMTWVMTYLISNPRVMKKAQAEVREVI--KNKDDIIE-EDIERLEYLKMVVKETFRVLPLVPLLIPREASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDW 459          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.819e-13
Identity = 48/159 (30.19%), Postives = 70/159 (44.03%), Query Frame = -1
Query:  245 KSMPFTQCVVNETLRVANIISGVFRR-AMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNS-------------GATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKLVFFPTTR---TQKRYPIIVQRR 670
            K   +    + ET+R+         R A  DI + GYTIPKG +V  S   +  D  ++KD   FNP RW +++             G +S   VF PFG GPR+C G  +A+ EL      +   F W P     +      R     K Y ++++RR
Sbjct:  333 KDTSYLNACIQETMRIRTAAPLALPRIASEDIKVGGYTIPKGTQVMMSVYGMASDERYWKDPHIFNPERWLSSNHSTENGGGGGGVVGNSSQSEVFIPFGVGPRMCVGMGVAKDELYYCASQMFMNFKWSPVNDKPIDDEGVARIALEYKEYQVVLERR 491          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CY250_MOUSE (Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 47/160 (29.38%), Postives = 77/160 (48.12%), Query Frame = -1
Query:  305 AVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMT-DINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK 781
            A+  L + P   A+++EE + +  K   + P    D   MP+T  +++E  R  +++       +T DI  + Y IPKG  V  S  +V  D   F +   F+P  + + +G     + F PF  G R+C G  LAR+EL +FL  ++  F+  P    K
Sbjct:  309 ALLLLLKYPHVTAKVQEEIEHVIGKH--RSPC-MQDRSRMPYTDAMIHEVQRFIDLVPNSLPHEVTCDIKFRNYFIPKGTNVITSLSSVLRDSKEFPNPEKFDPGHFLDENGKFKKSDYFMPFSTGKRICAGEGLARMELFLFLTSILQNFNLKPLVHPK 465          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 47/161 (29.19%), Postives = 79/161 (49.07%), Query Frame = -1
Query:  251 DEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRW-QNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDK--LVFFPTTRTQKRYPIIVQ 724
            +EI A    + P  ++    M +   VVNETLR+  I   + R    D+ I G +IPKG  V      +H + + + +   F P R+ + N    +P  V+ PFG GPR C G   A + + + L  ++  FS++P ++ +  L  +    TQ   P+I++
Sbjct:   44 EEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERFSKKNKDGINPY-VYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSFIPCKETQIPLKLYTQGLTQPEQPVILK 203          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3A9_RAT (Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 44/145 (30.34%), Postives = 69/145 (47.59%), Query Frame = -1
Query:  302 KEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 736
            K+  DEI A    +    ++    M +   VVNETLR+  I   + R   TD+ I G  IPKG  V     A+H D  ++ +   F P R+   +       ++ PFG GPR C G   A + + V L  ++  FS+ P ++ ++
Sbjct:  329 KKLQDEIDAALPNKAHATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGVFIPKGTVVMIPTFALHKDPHYWPEPEEFRPERFSKKNQDNINPYMYLPFGNGPRNCIGMRFALMNMKVALFRVLQNFSFQPCKETQI 473          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 45/164 (27.44%), Postives = 78/164 (47.56%), Query Frame = -1
Query:  302 IMTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIISGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 793
            +++  +  L   P    +L+EE D +   K+   P  ++    M +   VVNETLR+  I   + R    D+ I G  IPKG  V     A+H D  ++ +   F P R+   +       ++TPFG GPR C G   A + + + +  ++  FS+ P ++ ++
Sbjct:  313 VLSFIIYELATHPDVQQKLQEEIDTVLPNKA---PPTYDTVLQMEYLDMVVNETLRIFPIAMRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWPEPEKFLPERFSKKNNDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFKPCKETQI 473          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP304_DROME (Probable cytochrome P450 304a1 OS=Drosophila melanogaster GN=Cyp304a1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = -1
Query:  302 MTLAVKFLTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANII-SGVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATS-PVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVPAEQDKL 790
            ++L V++L   P  L +++ E DE+     +   LE  D K++PFT+  + E LR+  ++ S V  +A+ D  + GY IPK   V  S  A H D   + D   F P R+ +  G     ++V  PFG G RLC G   AR  L +    +   F +V    D+L
Sbjct:  324 LSLLVQYLMLYPAVLRRVQNEIDEV-VGCGRLPNLE--DRKNLPFTEATIREGLRIETLVPSDVPHKALEDTELLGYRIPKDTIVVPSLYAFHSDARIWSDPEQFRPERFLDADGKLCLKLDVSLPFGAGKRLCAGETFARNMLFLVTATMCQHFDFVLGPNDRL 485          
BLAST of CX043956 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = -1
Query:  320 LTETPLALAQLKEEHDEIRAKKSKQEPLEWNDYKSMPFTQCVVNETLRVANIIS-GVFRRAMTDINIKGYTIPKGWRVFASFRAVHLDHDHFKDARSFNPWRWQNNSGATSPVNVFTPFGGGPRLCPGYELARVELSVFLHHLVTRFSWVP 769
            +T+ P    Q++EE   +    S+Q  +E  D K++P+T  V++ET R+ANI+   V      D+  +GY I KG  V     +V  D   ++   +FNP  + +  G     + F  F  G R+C G  LAR+EL +F   L+ RF + P
Sbjct:  326 MTKYPHIQDQVQEEISRVIG--SRQTLVE--DRKNLPYTDAVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTFNPSHFLDEQGGFVKRDAFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSP 472          
The following BLAST results are available for this feature:
BLAST of CX043956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
CP2C7_RAT3.819e-1330.92Cytochrome P450 2C7 OS=Rattus norvegicus GN=Cyp2c7... [more]
CP2A2_RAT3.819e-1330.08Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2... [more]
C71BB_ARATH3.819e-1330.38Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C516B_DICDI3.819e-1330.19Probable cytochrome P450 516B1 OS=Dictyostelium di... [more]
CY250_MOUSE4.988e-1329.38Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE... [more]
CP3AJ_CAPAE4.988e-1329.19Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP3A9_RAT4.988e-1330.34Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9... [more]
CP3A8_MACFA4.988e-1327.44Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP304_DROME4.988e-1332.12Probable cytochrome P450 304a1 OS=Drosophila melan... [more]
CP2K1_ONCMY4.988e-1332.45Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_14E05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E05-J10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043956 ID=CX043956; Name=CX043956; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCACAAAAAGGAAATAAAATGATTACTATTAATC
ATTACTACAGCAGCTTGATTAAAACATATGAACATGATAATTTACATAAA
CTATTCTGCTAACATAAAATTTATTAAATTTGACATAAATAGTTGATTAC
ATTAGATGATACATCATCTCCTCTAGCATTCTCTTACTCCATCCTTCCTT
GCTTGCTTCTCTCTTTATTCTTTACATGGCTTTTAATTCTCATTTCGACG
CTGCACAATGATGGGGTACCTCTTCTGCGTTCTTGTTGTTGGAAAGAATA
CCAACTTATCTTGCTCAGCTGGTACCCAGCTGAAACGAGTAACTAAGTGG
TGAAGAAAAACAGAGAGCTCAACCCTCGCAAGTTCATATCCAGGGCACAG
CCGTGGCCCACCGCCGAACGGAGTGAATACATTTACTGGACTCGTTGCTC
CTGAATTATTCTGCCATCTCCATGGGTTGAAAGAGCGAGCATCTTTGAAA
TGGTCATGGTCTAAATGTACAGCCCTGAATGATGCAAAAACTCTCCACCC
CTTTGGTATAGTGTAACCTTTAATGTTGATATCTGTCATTGCTCTCCTGA
AAACCCCACTGATTATGTTGGCCACTCTCAGAGTTTCATTGACAACACAT
TGAGTGAATGGCATTGACTTATAATCATTCCATTCGAGAGGCTCTTGCTT
GCTCTTCTTTGCCCTTATCTCATCATGCTCCTCCTTTAGTTGAGCCAAAG
CTAGAGGAGTCTCAGTGAGGAACTTAACAGCAAGAGTCATGAT
back to top