CX043952

Overview
NameCX043952
Unique NameCX043952
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22
Identity = 65/202 (32.18%), Postives = 110/202 (54.46%), Query Frame = -3
Query:  191 NWRDTLTISTLASTNL-DPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKE---YILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFF-MGHNAEIPKSYGPIKELTSAENPPIYRDFRASEY 778
            +W  T  +  L  +N+ +  +  E  R   +++ + + KLAE L +LL   LGL+  +L +     +   +      YPPCP+ DL  G   H+D   + +L QD ++ GLQ+  D+QW+ V P+   +V+N+GD L++I+N K+KSV HRVVA   G R+S+  F+  G++A I  +   +++    E   +Y  F   +Y
Sbjct:   85 DWESTYFLRHLPQSNISEVPDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEK--EVEEKEVYPKFVFDDY 284          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22
Identity = 57/167 (34.13%), Postives = 93/167 (55.69%), Query Frame = -3
Query:  293 NWRDTLTISTLASTNLDP-NEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKE---YILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFF 778
            +W  T  +  L  +N+    +  E  +   +E+   + KLAE + +LL   LGL+  +L ++    +   +      YPPCP+P+L  G   H+D   L +L QD ++ GL V  D +WV V P+   +V+N+GD L++I+N K+KSV HRV+A   G R+S+  F+
Sbjct:   86 DWESTFFLRHLPVSNMSEIGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGNRMSIASFY 252          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.036e-21
Identity = 64/203 (31.53%), Postives = 108/203 (53.20%), Query Frame = -3
Query:  206 NWRDTLTISTLASTNL-DPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKE---YILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGP-RVSVPCFFMGHNAEI----PKSYGPIKELTSAENPP--IYRDF 778
            +W  T  +  L  +N+ D  +  +  R   +++   + KL+E L +LL   LGL+  +L ++    +   +      YPPCP PDL  G   H+D   + +L QD ++ GLQ+  D +WV V P+   +VVN+GD L++I+N K+KSV+HRV++   G  R+S+  F+   +  +    P+  G   E    EN P  ++ D+
Sbjct:   85 DWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDY 287          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.309e-21
Identity = 59/165 (35.76%), Postives = 94/165 (56.97%), Query Frame = -3
Query:  221 AAREYIKNVTKLAETLFELLSLALGLKAEHL-LEIGCPKEYILLCQ--YYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKS---YGPIKELTSAENPP 697
            A  EY K +  LA  +  +LS+ LGL+   L  E+G  ++ I+  +  +YP CPQP+L LG   H+D S LT +L + + GLQ+F++++WV  + +   ++++IGD L+I+SN K+KS+ HR + +    R+S   F      E PK      P+ E  S   PP
Sbjct:  174 ATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHTDVSALTFILHNMVPGLQLFYEDKWVTAKCVPNSIIMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF-----CEPPKEKIVLQPLPETVSEVEPP 333          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.015e-21
Identity = 58/169 (34.32%), Postives = 93/169 (55.03%), Query Frame = -3
Query:  293 NWRDTLTISTLASTNLDPNEYPEV---CRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEI---GCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFF 778
            +W  T  +    ++N+  +E P++    R   +E+   + +L+E L +LL   LGL+  +L           +      YPPCP+PDL  G   H+D   + +L QD ++ GLQ+  D  WV V P+   +VVN+GD L++I+N K+KSV HRV+A   G R+S+  F+
Sbjct:   91 DWESTFYLRHRPTSNI--SEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGNRMSIASFY 257          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.938e-21
Identity = 74/201 (36.82%), Postives = 101/201 (50.25%), Query Frame = -3
Query:  179 STNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPK--------EYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVF----HDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAEN-PPIYRDFRASEYFSKR 742
            +T L P+++ E C +   EY K +  L+  L  +L  +LGL  E L  +   K        +  L    YP CP P L +G   H+D S LTIL Q  I GL++       ++W+GV+PI G LVV +GD   IISN +F+S  HR V +    RVS   +F G     P     I  LTS +N PPIYR     EY + +
Sbjct:  143 ATLLWPDDHAEFC-NVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVNKTHHRVSA-AYFAG-----PPKNLQIGPLTSDKNHPPIYRRLIWEEYLAAK 336          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.143e-21
Identity = 64/199 (32.16%), Postives = 93/199 (46.73%), Query Frame = -3
Query:  191 RTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFRASEY 787
            R  +W +   +     T++  N+          ++      LA  L E+L+   G  +    E        L    YPPCP+P    G   H+D  FLTIL QDQ+GGLQ+  DN+W+ V+P    L++NIGD  Q  SN  +KSV+HRV+ +    R S   F          SY  + E +S  + P YR+F   E+
Sbjct:  127 RQLSWSEAFHVPM---TDISDNKDFTTLSSTMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMC-------PSYDAVIECSS--DRPAYRNFSFREF 313          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.143e-21
Identity = 63/203 (31.03%), Postives = 106/203 (52.22%), Query Frame = -3
Query:  191 NWRDTLTISTLASTNLDP-NEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGCPKE---YILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGP-RVSVPCFF-MGHNAEIPKSYGPIKELTSAENPPIYRDFRASEY 778
            +W  T  +  L  +N+   ++  E  +   +E+ K +  LAE L +LL   LGL+  +L +     +   +      YPPCP+PDL  G   H+D   + +L QD ++ GLQ+  D  W+ V P+   +VVN+GD L++I+N ++KSV HRV+    G  R+S+  F+  G +A I  +   +++    E   +Y  F   +Y
Sbjct:   85 DWESTFFLRHLPESNISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALVEKDQDEEKKEVYPKFVFEDY 287          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.773e-21
Identity = 60/174 (34.48%), Postives = 93/174 (53.45%), Query Frame = -3
Query:  179 YIKNVTKLAETLFELLSLALGL---KAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDF--RASEYFSKR 685
            Y   +++L+  L E+L  +LG+   +  +        + I+   YYP C +P  TLG   H DP+ LTIL QD +GGL+V+ + +W  ++P  G LVVN+GD    +SN +++S  HR V +   PR S+  F      E+     P +EL    +P +Y DF  RA   F++R
Sbjct:  174 YCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLC---PEMDTVVRPPEELVDDHHPRVYPDFTWRALLDFTQR 344          
BLAST of CX043952 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20
Identity = 55/148 (37.16%), Postives = 87/148 (58.78%), Query Frame = -3
Query:  296 PNEY-PEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHL-LEIGCPKEYILL--CQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASHVGPRVSVPCF 727
            P++Y P  C     EY   +  LA  +  +LSL LGL+   L  E+G  +E +L     YYP CPQP+L LG   H+D S LT +L + + GLQ+F++ +WV  + +   ++++IGD ++I+SN K+KS+ HR + +    R+S   F
Sbjct:  168 PSDYVPATC-----EYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVF 310          
The following BLAST results are available for this feature:
BLAST of CX043952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO_DIOKA6.075e-2232.181-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO3_CUCME6.075e-2234.131-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO1_ARATH1.036e-2131.531-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
LDOX_PERFR2.309e-2135.76Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
ACCO_DIACA3.015e-2134.32Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
G3OX3_ARATH3.938e-2136.82Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
G2OX8_ARATH5.143e-2132.16Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
ACCO1_CUCME5.143e-2131.031-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
GAOX1_ORYSJ8.773e-2134.48Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
LDOX_VITVI1.146e-2037.16Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14E03_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14E03-J6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043952 ID=CX043952; Name=CX043952; organism=Citrus sinensis; type=EST; length=810bp
TTTTTTTTTTTTTTTTTAGTTAAAACATATTTTTTTCGGAATTATTGGGA
AAGAGTTCACAACAGGACTCCGCAATTTGTAAATTGTTGTTACCAAATAC
GAGTAATTTATACAAATATTGCCAGCTTCATAGTTTGAGCTGATGGAGGG
GAGAATTGTCATCAAGCACCGTAGAAAATCGTTTGCTAAAATATTCACTT
GCACGAAAATCTCTGTAAATAGGAGGATTTTCTGCGGATGTCAACTCTTT
GATCGGCCCATAAGACTTTGGGATTTCTGCATTATGTCCCATGAAAAAGC
ATGGCACGGAAACCCTTGGACCGACATGACTGGCGACTACTCTGTGTTTA
ACACTCTTGAACTTGTCGTTTGATATAATCTGGAGGAAGTCCCCTATGTT
TACCACTAAGCCTCCCACAATGGGTTGAACACCAACCCATTGATTGTCAT
GAAAGACTTGAAGGCCGCCGATTTGGTCTTGCAGAAGAATGGTAAGAAAT
GAAGGGTCTGAATGCCCGGTAGCTCCCAATGTCAAATCTGGCTGAGGGCA
AGGTGGATAGTATTGGCAGAGAAGGATGTATTCTTTAGGGCATCCAATCT
CTAGTAAATGTTCAGCCTTCAGCCCAAGAGCCAGTGATAATAATTCAAAC
AGAGTTTCAGCCAATTTTGTGACATTTTTAATGTACTCTCTCGCAGCATC
TCTGCAAACTTCTGGGTATTCGTTGGGGTCTAAATTGGTGGAAGCTAAGG
TAGAAATTGTCAACGTGTCCCGCCAATTAGCTGTTCGTGAGTAATGCAGA
TCAAAGTTGC
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