CX043919

Overview
NameCX043919
Unique NameCX043919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043919 vs. ExPASy Swiss-Prot
Match: ST2B1_MOUSE (Sulfotransferase family cytosolic 2B member 1 OS=Mus musculus GN=Sult2b1 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.728e-11
Identity = 41/172 (23.84%), Postives = 84/172 (48.84%), Query Frame = -1
Query:  306 KIVYICRNPFDTFISSWHF---LNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFLGFPFSPEEEKQGVIQDIAKLCSFEEMKKLDVNKNG---KSIKDIENKYLFRKGEVGDWVNYLSPSMVKQLSLIMEEKL 803
            K++Y+ RNP D  +S +++     +L+  G P+  L+   K    G + FG +++H+ G+    ++   N LF+ Y++++QD+  +++++  FLG P   E      +  +    +F  MK   ++       S+ D       RKG  GDW N+ + +  +    +  E++
Sbjct:  138 KVIYVGRNPRDVVVSLYYYSKIAGQLKDPGTPDQFLQNFLK----GEVQFGSWFDHIKGWIR--MQNQENFLFITYEELQQDLRGSVQRICEFLGRPLGEE-----ALSSVVAHSAFAAMKANTMSNYSLLPASLLDHRQGEFLRKGISGDWKNHFTVAQSEAFDSVYREQM 298          
BLAST of CX043919 vs. ExPASy Swiss-Prot
Match: ST1A1_BOVIN (Sulfotransferase 1A1 OS=Bos taurus GN=SULT1A1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.728e-11
Identity = 47/162 (29.01%), Postives = 78/162 (48.15%), Query Frame = -1
Query:  366 LNLLPSM---NNIKIVYICRNPFDTFISSWHFLNKLRSQGLPEISLEEAFKMYCDGVIGFGPFWEHMLGYWNESLKRPNNVLFLKYDDMKQDIVSNLKKLASFLGFPFSPEEEKQGVIQDIAKLCSFEEMKKLDVNKNG---KSIKDIENKYLFRKGEVGDW 833
            L LLP       +K++YI RN  D  +S +HF    +    P  + +   + +  G + +G +++H+  +W  S   P  VL+L Y+D+K+D    ++K+  F+G    PEE     +  I +  SF+EMKK  +        ++ D       RKG  GDW
Sbjct:  111 LALLPKTLLDQKVKVIYIARNAKDVAVSYYHFYRMAKVHPDPG-TWDSFLEKFMAGEVCYGSWYQHVQEWWELSHTHP--VLYLFYEDIKEDPKREIQKILEFIGRSL-PEE----TVDHIVQRTSFKEMKKNPMTNYSTIPTAVMDHSISAFMRKGITGDW 264          
The following BLAST results are available for this feature:
BLAST of CX043919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
ST2B1_MOUSE8.728e-1123.84Sulfotransferase family cytosolic 2B member 1 OS=M... [more]
ST1A1_BOVIN8.728e-1129.01Sulfotransferase 1A1 OS=Bos taurus GN=SULT1A1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_14C09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-14C09-F18-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043919 ID=CX043919; Name=CX043919; organism=Citrus sinensis; type=EST; length=842bp
TTTTTTTTGTTTTAAATACATAAAAAAAGCTGAGCTGCTAATATGATTAA
AACAAGAAAGTCTGTAATCCATTACAACTACTTATTCAATGTTCGGGCAT
AAAGGGCCCATATTATTTAGTATGATACATAACATGCGGTGTAGCTAAGA
CATCCACATCACCACGTTTAGCTTGAAAGAGATGGTACCTTAAAAACAAA
AAAAAAAAAAAACAAAAAATCTCACACAAGCACTTGACAACAACAATAAT
TTTAACTTTATTTGCCGAGCTGGGAGGCCACCTTGAATGATAGACCAAAA
GCATCTAACTTTTCCTCCATGATGAGGGATAATTGTTTGACCATTGAAGG
GGACAAATAATTCACCCAATCACCCACTTCACCTTTCCTAAACAAGTACT
TATTTTCAATGTCCTTGATTGATTTGCCATTTTTATTGACATCTAATTTT
TTCATTTCCTCAAAGCTACAAAGCTTAGCTATGTCTTGAATCACTCCTTG
TTTCTCCTCCTCAGGGGAAAAAGGGAACCCCAAAAAGCTTGCCAATTTCT
TCAAATTTGACACAATGTCTTGTTTCATATCGTCATACTTCAAAAACAAG
ACATTGTTTGGTCTCTTCAAGCTCTCATTCCAATACCCTAACATATGCTC
CCAAAATGGACCGAACCCAATGACACCATCACAGTACATTTTGAATGCTT
CCTCTAGTGAAATTTCAGGTAATCCTTGAGACCTCAATTTGTTAAGAAAA
TGCCATGAAGAGATGAAAGTATCAAAAGGGTTTCTGCAAATATAAACAAT
CTTAATGTTGTTCATTGAAGGAAGCAAATTTAAGGAAGCAAA
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