CX043898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.087e-32 Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ VS KD+KRG V + D+P A FT+Q++++ HP I GY PV HT+ +A F E+L K+D R+G+ +E+ P+FLK GDA VK+ PTKPMV+E E P LGRFA+RDM T+A G+ V K+ Sbjct: 292 GFNVRGVSKKDIKRGDVCGHP-DNPPTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVACTFIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGMAIDVKAKN 427
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.644e-32 Identity = 69/136 (50.74%), Postives = 94/136 (69.12%), Query Frame = -2 Query: 413 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 820 GFNV+ V KD+KRG VA S + P A FT+Q+I++ HP + GY PV+ HT+ +A + E+ +KID ++GKE+EK P+FLK+GD+ VKM P K +VVE F E+P LGRFA+RDM +TV VGV+ V K Sbjct: 296 GFNVRGVEKKDIKRGDVAG-SLNVPPTVADEFTAQIIVIWHPTAVSVGYTPVVHIHTASVACRITELTSKIDPKTGKEVEKNPQFLKSGDSAIVKMKPIKELVVEKFREFPALGRFAMRDMGKTVGVGVVIDVKPK 430
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.133e-31 Identity = 64/139 (46.04%), Postives = 93/139 (66.91%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ V D+KRG VA ++ + P + F +Q+I++NHP I GY PVL HT +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTKPMV+E E P +GRFA+RDM QTVA G++ S+ K + Sbjct: 290 GFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.480e-31 Identity = 64/139 (46.04%), Postives = 93/139 (66.91%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ V D+KRG VA ++ + P + F +Q+I++NHP I GY PVL HT +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTKPMV+E E P +GRFA+RDM QTVA G++ S+ K + Sbjct: 290 GFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.480e-31 Identity = 67/137 (48.91%), Postives = 93/137 (67.88%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ V KD+KRG V ++ + P A++FT+Q++++ HP + +GY PV HT+ IA FAEI K++ +G+ LE+ P FLK GDA VK+IPTKPMV+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 292 GFNVRGVGKKDIKRGDVLGHTTNPPTV-ATDFTAQIVVLQHPSVLTDGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.297e-31 Identity = 69/133 (51.88%), Postives = 92/133 (69.17%), Query Frame = -2 Query: 422 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 820 GFNV+ V KD+KRG VA + ++ P A FT+QVI++ HP +G GY PVL HT+ IA + +EI ++ID ++GKE EK P+F+K GD+ VK P K +V E F E+P LGRFA+RDM +TV VGVI V Sbjct: 296 GFNVRGVEKKDVKRGDVAGSVQNPPTV-ADEFTAQVIVIWHPTAVGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDV 427
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.297e-31 Identity = 64/139 (46.04%), Postives = 93/139 (66.91%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ V D+KRG VA ++ + P + F +Q+I++NHP I GY PVL HT+ +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTK MV+E E P +GRFA+RDM QTVA G++ S+ K D Sbjct: 290 GFNVRGVGKNDIKRGDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAD 428
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.297e-31 Identity = 64/133 (48.12%), Postives = 91/133 (68.42%), Query Frame = -2 Query: 422 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 820 GFNV+ +S KD++RG VA + D P A FT+++ ++ HP I GY PV+ HT+ IA + EI K+D R+G+ +EK P+FLK GDA VK P KPMV+E +SE+P LGRFA+RDM +T+ +G++ V Sbjct: 298 GFNVRGISKKDIRRGDVAGHV-DKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDV 429
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.307e-31 Identity = 67/137 (48.91%), Postives = 92/137 (67.15%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ V KD+KRG V ++ + P A++FT+Q++++ HP + GY PV HT+ IA FAEI K++ +G+ LE+ P FLK GDA VK+IPTKPMV+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 292 GFNVRGVGKKDIKRGDVLGHTTNPPTV-ATDFTAQIVVLQHPSVLTVGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.307e-31 Identity = 64/133 (48.12%), Postives = 93/133 (69.92%), Query Frame = -2 Query: 422 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 820 GFNV+ + KD+KRG V ++ + P A FT++VI++ HP + GY PV+ HT+ IA + +EI+ ++D ++GKE EK P+F+K G++ VK P KP+ VE FS++PPLGRFA+RDM +TV VGVI V Sbjct: 296 GFNVRGIDKKDVKRGDVVGHTTNPPTV-AEEFTARVIVVWHPTALAVGYTPVVHVHTASIACRVSEIVARLDPKTGKEAEKNPQFIKQGESAIVKFKPIKPLCVEKFSDFPPLGRFAMRDMGKTVGVGVINDV 427 The following BLAST results are available for this feature:
BLAST of CX043898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043898 ID=CX043898; Name=CX043898; organism=Citrus sinensis; type=EST; length=821bpback to top |