CX043898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.363e-29 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ V KD+KRG V ++ + P A++FT+Q++++ HP + GY PV HT+ IA F E+ K++ +G+ LE+ P FLK GDA VK++PTKP+V+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 292 GFNVRGVGKKDIKRGDVLGHTTNPPTV-AADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.363e-29 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ V KD+KRG V ++ + P A++FT+Q++++ HP + GY PV HT+ IA F E+ K++ +G+ LE+ P FLK GDA VK++PTKP+V+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 292 GFNVRGVGKKDIKRGDVLGHTTNPPTV-AADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.363e-29 Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNV+ V KD+KRG V ++ + P A++FT+Q++++ HP + GY PV HT+ IA F E+ K++ +G+ LE+ P FLK GDA VK++PTKP+V+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 292 GFNVRGVGKKDIKRGDVLGHTTNPPTV-AADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.031e-29 Identity = 62/136 (45.59%), Postives = 88/136 (64.71%), Query Frame = -2 Query: 413 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 820 GFNV+ ++ D+KRG V + D P FT+Q+I++NHP I GY PV HT+ +A + EI+ ++ + G L+++P F+KNGD VK+IP KP+V+E SE P LGRFAVRDM QTVA G ++K+ Sbjct: 290 GFNVRGIAKNDIKRGDVCGHL-DTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29 Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = -2 Query: 422 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 820 G+NV+ + D++RG V + D+P A FT+Q++++ HP I GY PV CHT+ +A EI K+D R+G E+ P F+K GDA + + PTKPMV+E E P LGRFA+RDM T+A G+ ++V Sbjct: 290 GWNVRGIGKNDIRRGDVCGHV-DNPPTVAKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.980e-29 Identity = 56/136 (41.18%), Postives = 91/136 (66.91%), Query Frame = -2 Query: 413 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 820 GFN++ + KD+KRG V + + P K A F +Q+I+++HP + GY PV+ CHT+ +A +E ++KI+ +G E+ PKFLK GD+ +K+ P +P +ETF E+P +GRFA+RDM T+A G++K + ++ Sbjct: 299 GFNLRGIEKKDIKRGDVLGDPANPP-KVAKEFLAQIIVIHHPTALAPGYTPVMHCHTAQVAAIMSEFVSKINPATGAVEEENPKFLKVGDSAIIKIRPVRPTPIETFKEFPEMGRFALRDMGATIAAGIVKEITEE 433
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.173e-28 Identity = 62/136 (45.59%), Postives = 86/136 (63.24%), Query Frame = -2 Query: 413 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 820 G+NV+ + D++RG V ++ D+P K A F Q++++ HP I GY PV HTS IA + E+ K+D +SG+ E+ P FLK GDA V + PTKPMV+E E P LGRFA+RDM T+A G+ SV +K Sbjct: 288 GWNVRGIGKADVRRGDVCGHT-DNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.613e-28 Identity = 61/136 (44.85%), Postives = 86/136 (63.24%), Query Frame = -2 Query: 413 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 820 GFNV+ ++ D+KRG V + D P FT+Q++++NHP I GY PV HT+ +A K EI+ ++ + G L+ +P F+K GD VK+IP KP+V+E SE P LGRFAVRDM QTVA G ++K+ Sbjct: 290 GFNVRGIAKNDIKRGDVCGHL-DSPPTVVRAFTAQIVVLNHPSVIAPGYKPVFHVHTAQVACKIDEIVRTLNPKDGTTLKDKPDFIKTGDIAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.820e-28 Identity = 76/156 (48.72%), Postives = 99/156 (63.46%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEL-------------EKEPK------FLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNVK ++VKD+KRG V ++K+DP F + VII +H I NGY PVLDCHT+HIA KFA IL+K D+R GK+ + EP+ K G++ V + PTK MVVE +S Y PLGRFAVRDM++TVAVGVI+ V ++ Sbjct: 326 GFNVK-LTVKDIKRGDVCGDTKNDPPIPTECFLANVIIQDHKN-IRNGYTPVLDCHTAHIACKFASILSKKDKR-GKQTHDVSDDTEWATKDDAEPRNNRMNIAAKTGESVNVWLQPTKAMVVEAYSMYSPLGRFAVRDMKKTVAVGVIQCVQPRN 478
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 7.602e-28 Identity = 57/133 (42.86%), Postives = 91/133 (68.42%), Query Frame = -2 Query: 422 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 820 G NV+ ++ +D+KRG V + P A ++++++ HP IG GYAPV+ HT+ + V+ E+++K+D R+G+ +E++P+F+K GD VK+ P KP+V E FS++PPLGRFA+RDM +T+A G I V Sbjct: 305 GVNVRGIAKEDVKRGDVLGKPDNVPTV-AEEIVARIVVLWHPTAIGPGYAPVMHIHTATVPVQITELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEV 436 The following BLAST results are available for this feature:
BLAST of CX043898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043898 ID=CX043898; Name=CX043898; organism=Citrus sinensis; type=EST; length=821bpback to top |