CX043898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_SORMA (Elongation factor 1-alpha OS=Sordaria macrospora GN=TEF PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.125e-55 Identity = 101/135 (74.81%), Postives = 121/135 (89.63%), Query Frame = -2 Query: 416 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 820 GFNVKNVSVKD++RG VA +SK+DP GA++FT+QVI++NHPGQ+G GYAPVLDCHT+HIA KFAE+L KIDRR+GK +E PKF+K+GDA VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK+VDK Sbjct: 308 GFNVKNVSVKDIRRGNVAGDSKNDPPVGAASFTAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKAVETSPKFIKSGDAAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVDK 442
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_PIRIN (Elongation factor 1-alpha OS=Piriformospora indica GN=TEF1 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.920e-55 Identity = 100/140 (71.43%), Postives = 125/140 (89.29%), Query Frame = -2 Query: 401 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 820 GFNVKNVSVKD++RG VAS+SK+DPAK A++F +QVI++NHPGQIG GYAPVLDCHT+HIA KF+E++ KIDRR+GK +E PKF+K+GDA VK++P+KPM VE+++EYPPLGRFAVRDMRQTVAVGVIKSV+K + G Sbjct: 309 GFNVKNVSVKDIRRGDVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFSELIEKIDRRTGKTMEAAPKFVKSGDAAIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTVAVGVIKSVEKTEGKG 448
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A3_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 1.920e-55 Identity = 104/136 (76.47%), Postives = 119/136 (87.50%), Query Frame = -2 Query: 413 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 820 GFNVKN+SVKD++RG VA +SK+DP A +FT+QVII+NHPGQI GYAPVLDCHT+HIA KFAE+ KIDRRSGK+LE +PKFLK+GDA V+MIP KPM VETFS+YPPLGRFAVRDMRQTVAVGVIK VDKK Sbjct: 309 GFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVIKGVDKK 444
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_COCIM (Elongation factor 1-alpha OS=Coccidioides immitis GN=TEF PE=2 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 2.507e-55 Identity = 98/140 (70.00%), Postives = 122/140 (87.14%), Query Frame = -2 Query: 401 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 820 GFNVKNVSVK+++RG VA +SK+DP KG +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+E+L KIDRR+GK +E PKF+K+GDA VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIKSV+K + +G Sbjct: 308 GFNVKNVSVKEVRRGNVAGDSKNDPPKGCDSFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSEKTG 447
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_EUGGR (Elongation factor 1-alpha OS=Euglena gracilis GN=TEF PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.275e-55 Identity = 106/140 (75.71%), Postives = 123/140 (87.86%), Query Frame = -2 Query: 401 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 820 GFNVKNVSVKD++RGYVASN+K+DPAK A++FT+QVII+NHPGQIGNGYAPVLDCHT HIA KFA I TKIDRRSGKELE EPKF+K+GDA V M P KPM VE+F++YPPLG + DMRQTVAVGVIKSV+KK+ +G Sbjct: 297 GFNVKNVSVKDIRRGYVASNAKNDPAKEAADFTAQVIILNHPGQIGNGYAPVLDCHTCHIACKFATIQTKIDRRSGKELEAEPKFIKSGDAAIVLMKPQKPMCVESFTDYPPLG-VSCGDMRQTVAVGVIKSVNKKENTG 435
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A2_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-2 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.275e-55 Identity = 99/140 (70.71%), Postives = 125/140 (89.29%), Query Frame = -2 Query: 401 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 820 GFNVKNVSVKD++RG V S+SK+DPAK +++FT+QVII+NHPGQI GYAPVLDCHT+HIA KF+E++ KIDRRSGK++E PKF+K+GD+ VKM+P+KPM VE +++YPPLGRFAVRDMRQTVAVGVIK+V+K D +G Sbjct: 307 GFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.275e-55 Identity = 99/140 (70.71%), Postives = 125/140 (89.29%), Query Frame = -2 Query: 401 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 820 GFNVKNVSVKD++RG V S+SK+DPAK +++FT+QVII+NHPGQI GYAPVLDCHT+HIA KF+E++ KIDRRSGK++E PKF+K+GD+ VKM+P+KPM VE +++YPPLGRFAVRDMRQTVAVGVIK+V+K D +G Sbjct: 307 GFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A1_DROME (Elongation factor 1-alpha 1 OS=Drosophila melanogaster GN=Ef1alpha48D PE=1 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 3.275e-55 Identity = 100/140 (71.43%), Postives = 121/140 (86.43%), Query Frame = -2 Query: 401 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 820 GFNVKNVSVK+L+RGYVA +SK +P KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI K+DRRSGK E+ PKF+K+GDA V ++P+KP+ VE F E+PPLGRFAVRDMRQTVAVGVIK+V+ KD SG Sbjct: 309 GFNVKNVSVKELRRGYVAGDSKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASG 448
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A2_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis GN=eef1ao PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.277e-55 Identity = 104/139 (74.82%), Postives = 120/139 (86.33%), Query Frame = -2 Query: 404 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPS 820 GFNVKN+SVKD++RG VA +SK+DP A +FT+QVII+NHPGQI GYAPVLDCHT+HIA KFAE+ KIDRRSGK+LE +PKFLK+GDA V+MIP KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK VDKK S Sbjct: 309 GFNVKNISVKDIRRGNVAGDSKNDPPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKGVDKKAAS 447
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_ONCVO (Elongation factor 1-alpha OS=Onchocerca volvulus PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.586e-55 Identity = 101/140 (72.14%), Postives = 120/140 (85.71%), Query Frame = -2 Query: 401 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 820 GFNVKN+S+KD++RG VAS+SK+DPAK FT+QVIIMNHPGQI GY PVLDCHT+HIA KFAE+ K+DRRSGK++E PK LK+GDAG + +IPTKP+ VETF+EYPPLGRFAVRDMRQTVAVGVIK+VDK + G Sbjct: 309 GFNVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVETFTEYPPLGRFAVRDMRQTVAVGVIKNVDKSEGVG 448 The following BLAST results are available for this feature:
BLAST of CX043898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043898 ID=CX043898; Name=CX043898; organism=Citrus sinensis; type=EST; length=821bpback to top |