CX043898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52 Identity = 96/138 (69.57%), Postives = 119/138 (86.23%), Query Frame = -2 Query: 407 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDP 820 GFNVKNVSVKD++RG V +SK+DP G ++FT+QVII+NHPGQI GY+PVLDCHT+HIA KFAE++ KIDRRSGK++E+ PKF+K+GDA KM+P+KPM VE F++Y PLGRFAVRDMRQTVAVGVIK+V+K P Sbjct: 307 GFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52 Identity = 99/136 (72.79%), Postives = 117/136 (86.03%), Query Frame = -2 Query: 413 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 820 GFNVKNVSVKD++RG V +SK DP + A+ FTSQVII+NHPGQI GY+PV+DCHT+HIA KFAE+ KIDRRSGK+LE PK LK+GDA V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK Sbjct: 309 GFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A2_MOUSE (Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef1a2 PE=1 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52 Identity = 99/136 (72.79%), Postives = 117/136 (86.03%), Query Frame = -2 Query: 413 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 820 GFNVKNVSVKD++RG V +SK DP + A+ FTSQVII+NHPGQI GY+PV+DCHT+HIA KFAE+ KIDRRSGK+LE PK LK+GDA V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK Sbjct: 309 GFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.165e-52 Identity = 96/138 (69.57%), Postives = 119/138 (86.23%), Query Frame = -2 Query: 407 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDP 820 GFNVKNVSVKD++RG V +SK+DP G ++FT+QVII+NHPGQI GY+PVLDCHT+HIA KFAE++ KIDRRSGK++E+ PKF+K+GDA KM+P+KPM VE F++Y PLGRFAVRDMRQTVAVGVIK+V+K P Sbjct: 307 GFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.595e-52 Identity = 96/137 (70.07%), Postives = 116/137 (84.67%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNVKNVSVK+++RG V ++K+DP KG ++F + VI++NHPGQI GY+PVLDCHT+HIA +F E+L K DRRSGK+LE PKFLK+GDA VK +P+KPM VE FSEYPPLGRFAVRDMRQTVAVGVIKSVDK + Sbjct: 307 GFNVKNVSVKEIRRGNVCGDAKNDPPKGCASFNATVIVLNHPGQISAGYSPVLDCHTAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKPMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKSVDKTE 443
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 3.389e-52 Identity = 94/140 (67.14%), Postives = 118/140 (84.29%), Query Frame = -2 Query: 401 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 820 GFNVKNVS+KD++RG V +SK+DP A++F +QVI++NHPGQIG GY PVLDCHT+HIA KFAE++ KIDRR+GK +E PKF+K+GDA VK++ KP+ VET+++YPPLGRFAVRDMRQTVAVGVIKSVDK + G Sbjct: 307 GFNVKNVSIKDIRRGNVCGDSKNDPPMEAASFNAQVIVLNHPGQIGAGYTPVLDCHTAHIACKFAELIEKIDRRTGKVMEAAPKFVKSGDAAIVKLVAQKPLCVETYADYPPLGRFAVRDMRQTVAVGVIKSVDKTEKGG 446
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 4.426e-52 Identity = 94/137 (68.61%), Postives = 119/137 (86.86%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNVKNVSVK+L+RGYVA +SK++P +GA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI K DRR+GK E EPK +K+GDA + ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIKSV+ K+ Sbjct: 309 GFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSVNFKE 445
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.549e-52 Identity = 93/137 (67.88%), Postives = 118/137 (86.13%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNVKNVS+KD+KRG+VAS++K+DPAKG +FT+QVI++NHPG+I NGY+PV+DCHT+HI+ KF I K+D+RSGK LE+ PK +K+GDA V M P KP+ VE F++YPPLGRFAVRDM+QTVAVGVIKSV KK+ Sbjct: 293 GFNVKNVSIKDIKRGFVASDAKNDPAKGCEDFTAQVIVLNHPGEIKNGYSPVVDCHTAHISCKFQTITAKMDKRSGKVLEENPKLIKSGDAALVVMQPLKPLCVEAFTDYPPLGRFAVRDMKQTVAVGVIKSVTKKE 429
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_HYDAT (Elongation factor 1-alpha OS=Hydra attenuata PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.859e-52 Identity = 97/135 (71.85%), Postives = 117/135 (86.67%), Query Frame = -2 Query: 416 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 820 GFNVKNVS+KD++RG VAS+SK+DPA A++F +QVII+NHPG+I GY PVLDCHT+HIA KFAE+L KIDRRSGK +E EPK +K+GDA + +IP+K M VE+FS+YPPLGRFAVRDMRQTVAVGVIK VDK Sbjct: 311 GFNVKNVSIKDIRRGMVASDSKNDPAIEAASFKAQVIILNHPGEIHAGYQPVLDCHTAHIACKFAELLEKIDRRSGKVIETEPKMVKSGDAAIINLIPSKGMCVESFSQYPPLGRFAVRDMRQTVAVGVIKEVDK 445
BLAST of CX043898 vs. ExPASy Swiss-Prot
Match: EF1A_PUCGR (Elongation factor 1-alpha OS=Puccinia graminis GN=TEF PE=3 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 1.682e-51 Identity = 96/137 (70.07%), Postives = 116/137 (84.67%), Query Frame = -2 Query: 410 GFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 820 GFNVKNVSVKD++RG V ++K DP K A++F +QVI++NHPGQIGNGY PVLDCHT+HIA KF + KIDRR+GK LE+ PKF+K+GDA VKM+P+K M VE F++YPPLGRFAVRDMRQTVAVGVIKSV+K D Sbjct: 306 GFNVKNVSVKDIRRGNVCGDTKCDPPKEAASFVAQVIVLNHPGQIGNGYCPVLDCHTAHIACKFDTLQQKIDRRTGKALEEAPKFVKSGDACLVKMVPSKAMCVEPFADYPPLGRFAVRDMRQTVAVGVIKSVEKTD 442 The following BLAST results are available for this feature:
BLAST of CX043898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043898 ID=CX043898; Name=CX043898; organism=Citrus sinensis; type=EST; length=821bpback to top |