CX043893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRPD (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=rsmA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.642e-24 Identity = 72/231 (31.17%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAV-TSTKSFFSMVS 780 DY T L+ G +KS GQ+++ ++ I ++ A + + V+EIGPG G+LT L A V+A E D +V ++ + D ++V+ +D +K +++ + ++ K+ KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VPRT F P P VD+A++ + D P + + FF VS Sbjct: 13 DYSVTKAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQI----KQFKNPDLPIKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRR---DQPLIEVKDEDFFFRVS 234
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRPC (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rsmA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.642e-24 Identity = 72/231 (31.17%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAV-TSTKSFFSMVS 780 DY T L+ G +KS GQ+++ ++ I ++ A + + V+EIGPG G+LT L A V+A E D +V ++ + D ++V+ +D +K +++ + ++ K+ KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VPRT F P P VD+A++ + D P + + FF VS Sbjct: 13 DYSVTKAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQI----KQFKNPDLPIKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRR---DQPLIEVKDEDFFFRVS 234
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRPB (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rsmA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.642e-24 Identity = 72/231 (31.17%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAV-TSTKSFFSMVS 780 DY T L+ G +KS GQ+++ ++ I ++ A + + V+EIGPG G+LT L A V+A E D +V ++ + D ++V+ +D +K +++ + ++ K+ KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VPRT F P P VD+A++ + D P + + FF VS Sbjct: 13 DYSVTKAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQI----KQFKNPDLPIKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRR---DQPLIEVKDEDFFFRVS 234
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRP8 (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pyogenes serotype M18 GN=rsmA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.642e-24 Identity = 72/231 (31.17%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAV-TSTKSFFSMVS 780 DY T L+ G +KS GQ+++ ++ I ++ A + + V+EIGPG G+LT L A V+A E D +V ++ + D ++V+ +D +K +++ + ++ K+ KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VPRT F P P VD+A++ + D P + + FF VS Sbjct: 5 DYSVTKAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQI----KQFKNPDLPIKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRR---DQPLIEVKDEDFFFRVS 226
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRP1 (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pyogenes serotype M1 GN=rsmA PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.642e-24 Identity = 72/231 (31.17%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAV-TSTKSFFSMVS 780 DY T L+ G +KS GQ+++ ++ I ++ A + + V+EIGPG G+LT L A V+A E D +V ++ + D ++V+ +D +K +++ + ++ K+ KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VPRT F P P VD+A++ + D P + + FF VS Sbjct: 5 DYSVTKAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQI----KQFKNPDLPIKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRR---DQPLIEVKDEDFFFRVS 226
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRU0 (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rsmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.144e-24 Identity = 70/233 (30.04%), Postives = 122/233 (52.36%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAF 789 DY T L+ G +KS GQ+++ ++ I ++ A + V+EIGPG G+LT L A V+A E D ++ ++ + D ++V+ +D +K ++S + ++ K+ KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VP+T F P P VD+A++ +++ VT FF + F Sbjct: 5 DYSVTRAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDRSVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLIPILADTLRDFDNVQVINQDILKSDLQSQI----KQFKNPDLPLKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKVAFIVPKTVFVPAPNVDSAILKM-VRRPEPLIEVTDEDFFFRVAKVGF 230
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRPG (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rsmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.144e-24 Identity = 72/231 (31.17%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAV-TSTKSFFSMVS 780 DY T L+ G +KS GQ+++ ++ I ++ A + + V+EIGPG G+LT L A V+A E D +V ++ + D ++V+ +D +K +++ + ++ K+ KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VPRT F P P VD+A++ + D P + + FF VS Sbjct: 5 DYSVTKAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQI----KQFKNPDLPIKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRR---DQPLIEIKDEDFFFRVS 226
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRP6 (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus pyogenes serotype M6 GN=rsmA PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.144e-24 Identity = 72/231 (31.17%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAV-TSTKSFFSMVS 780 DY T L+ G +KS GQ+++ ++ I ++ A + + V+EIGPG G+LT L A V+A E D +V ++ + D ++V+ +D +K +++ + ++ K+ KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VPRT F P P VD+A++ + D P + + FF VS Sbjct: 5 DYSVTKAVLDRHGFTFKKSFGQNFLTDTNILQKIVDTAEIDQNVNVIEIGPGIGALTEFLAENAAEVMAFEIDDRLVPILADTLRDFDNVQVVNQDILKADLQTQI----KQFKNPDLPIKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKVAFIVPRTVFVPAPNVDSAILKMVRR---DQPLIEIKDEDFFFRVS 226
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_STRE4 (Ribosomal RNA small subunit methyltransferase A OS=Streptococcus equi subsp. equi (strain 4047) GN=rsmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.144e-24 Identity = 71/231 (30.74%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 94 DYHATIKALNSKGRFPRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQLLPMGDIFSEVVLLLQEETALRL-VEPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAV-TSTKSFFSMVS 780 DY T L+ G +KS GQ+++ ++ I ++ A + + V+EIGPG G+LT L A V+A E D+ +V ++ + D ++V+ +D +K +++ + ++ + KVVAN+P+ I+T ++ L+ F E V+++Q E A R+ EP+ T Y ++I V +Y + F VPRT F P P VD+A++ + D P + + FF VS Sbjct: 5 DYSVTKSILDRYGFTFKKSFGQNFLTDTNILQKIVDTAEIDKSVNVIEIGPGIGALTEFLAERAAEVMAFEIDERLVPILADTLRDFDNVQVVNQDILKADLQTQL----KQFSNPDLPIKVVANLPYYITTPILMHLIESKIPFQEFVVMMQREVADRISAEPN--TKAYGSLSIAVQYYMTAKIAFVVPRTVFVPAPNVDSAILKMTRR---DQPLIEVQDEDFFFRVS 226
BLAST of CX043893 vs. ExPASy Swiss-Prot
Match: RSMA_CHLPN (Ribosomal RNA small subunit methyltransferase A OS=Chlamydia pneumoniae GN=rsmA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.144e-24 Identity = 73/219 (33.33%), Postives = 125/219 (57.08%), Query Frame = 1 Query: 139 PRKSLGQHYMLNSEINDQLAAAAAVQEGDIVLEIGPGTGSLTNVLLNAGATVLAIEKDQHMVGLVRERFASIDQLKVLQEDFVKCHIRSHMLSLFERRKSSSGFAKVVANIPFNISTDVIKQL-LPMGDIFSEVVLLLQEETALRLV-EPSLRTSEYRPINIFVNFYSEPEYKFKVPRTNFFPQPKVDAAVVTFKLKQATDYPAVTSTKSFFSMVSSAF 789 P+KSL Q+++++ I ++ A + V D VLEIGPG G+LT L+ AGA V+AIEKD S+++L + E C L ++ + G +VVAN+P++I+T ++ +L L D + V +++Q+E A R+V +P R +Y + IF+ F+++ Y FKV + F+P+P+V +AV+ K+K+ + FF++ +AF Sbjct: 20 PKKSLSQNFLVDQNIVKKIVATSEVIPQDWVLEIGPGFGALTEELIAAGAQVIAIEKDPMFA-------PSLEELPIRLEIIDACKYPLDQLQEYK----TLGKGRVVANLPYHITTPLLTKLFLEAPDFWKTVTVMVQDEVARRIVAQPGGR--DYGSLTIFLQFFADIHYAFKVSASCFYPKPQVQSAVIHMKVKETLPL-SDEEIPVFFTLTRTAF 224 The following BLAST results are available for this feature:
BLAST of CX043893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043893 ID=CX043893; Name=CX043893; organism=Citrus sinensis; type=EST; length=791bpback to top |