CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS1_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain CCS1) GN=dxs1 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.275e-46 Identity = 96/172 (55.81%), Postives = 121/172 (70.35%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 HMV TA IDDRPS FRFPRG G+G +P ++GT LEIGKGR++ EG+RVAIL +G+ +++ AA L + I+ T+ADARF KPLD LI QLA HE LITVEEG+VGGFGSHV H L + + D +K RSMVLPD +ID SP D +G+++ I A VL+ LG Sbjct: 462 HMVRTALEIDDRPSAFRFPRGEGMGVDMP--DRGTALEIGKGRMISEGNRVAILNFGTRLKEVQEAAETLSQRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENAVFDTGIKYRSMVLPDIFIDQASPKDMYAVAGMNAEDIVAKVLTTLG 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=dxs PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.587e-46 Identity = 91/177 (51.41%), Postives = 123/177 (69.49%), Query Frame = -1 Query: 238 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 768 HMVAT I+DRPS R+PRG G G +P + G PLEIGKGR++ +G++VA+L +G+ + +C AA L + +S TVADARF KPLD DL+ +LANEHEILIT+EEGS+GGFG+HV L G LDG +K+R+MVLPD ++DH +P +GL ++ I V LG+ +A Sbjct: 458 HMVATQVAINDRPSALRYPRGEGRGVEMP--DVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELAALGLSTTVADARFMKPLDVDLVLKLANEHEILITIEEGSIGGFGTHVMQTLAEHGKLDGEVKMRAMVLPDVFLDHDTPTAMYANAGLDAKAIVKKVFEALGKEHKA 632
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MARMM (1-deoxy-D-xylulose-5-phosphate synthase OS=Maricaulis maris (strain MCS10) GN=dxs PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.587e-46 Identity = 95/176 (53.98%), Postives = 124/176 (70.45%), Query Frame = -1 Query: 238 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 765 MV TAA+IDD PS FR+PRGNG G +P + PLEIGKGRI+ EG R+AIL G+ +++ + AA+ L +Q S TVADARF KPLD DLI +LA EHE+LITVEEG+VGGFG+ V H L G LD L++R++ LPD + D +P D E +GL++RHI+A L +G+ A Sbjct: 459 MVKTAALIDDGPSAFRYPRGNGTGIEIPDQIE--PLEIGKGRIVREGSRIAILSLGTRLEESLKAADALAAQGFSTTVADARFAKPLDEDLILRLAREHEVLITVEEGAVGGFGAFVLHMLADKGALDRGLRIRTLTLPDVFQDQEAPFDMYETAGLNARHIAAKALEAMGKDDAA 632
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_OCHA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=dxs PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.296e-46 Identity = 94/173 (54.34%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG+G+G LP +G LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA+ L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD LK+R++ LPD Y DHG P E+GL I V + LGR Sbjct: 459 HMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGQLLEIGKGRIVREGTKVALLSFGTRLQECLAAADELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFASHVLQFLATDGLLDRGLKVRALTLPDTYQDHGKPDAMYAEAGLDRTGIVHAVFAALGR 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BRUO2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dxs PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.296e-46 Identity = 94/173 (54.34%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TV DARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 459 HMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVVDARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BRUME (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis GN=dxs PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.296e-46 Identity = 94/173 (54.34%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD K+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 459 HMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BRUMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.296e-46 Identity = 94/173 (54.34%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD K+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 459 HMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BRUAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus GN=dxs PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.529e-46 Identity = 94/173 (54.34%), Postives = 121/173 (69.94%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD LK+R+++LPD Y DHG P E+GL I TV + L R Sbjct: 459 HMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BRUA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain S19) GN=dxs PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.529e-46 Identity = 94/173 (54.34%), Postives = 121/173 (69.94%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGF SHV FL G+LD LK+R+++LPD Y DHG P E+GL I TV + L R Sbjct: 459 HMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BRAJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum GN=dxs PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.245e-45 Identity = 93/174 (53.45%), Postives = 122/174 (70.11%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMVAT IDDRPS R+PRG G G +P G PLEIGKGR++ +G ++A+L +G+ + +C AA+ L + +S T+ADARF KPLDT+L+ +LA +HEILIT+EEGSVGGFGSHV FLT G LD G +K R+MVLPD + DH +PA +GL ++ I A V LG+ Sbjct: 480 HMVATQVAIDDRPSSLRYPRGEGRGIEMP--EVGIPLEIGKGRMIRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQFLTDQGALDSGMVKFRTMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGK 651 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |