CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.065e-44 Identity = 88/173 (50.87%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMVAT IDDRPS R+PRG G G +P G L IGKGR++ +G +VA+L +G+ + +C AA+ L + +S ++ADARF KPLD +L+ +LA +HEILIT+EEGS+GGFGSHV +L G+LDG LK+RSMVLPD + DH +PA +GL ++ I V +LG+ Sbjct: 461 HMVATQVAIDDRPSSVRYPRGEGRGVEMP--EVGVALPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGK 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SILPO (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter pomeroyi GN=dxs PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.004e-44 Identity = 92/172 (53.49%), Postives = 118/172 (68.60%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 HMVATAA DD P FR+PRG G+G +P G LEIGKGR++ +G RVA+L +G+ + + AA L ++ I+ T+ADARF KPLD DLI LA++HE LIT+EEG+VGGFGSHV L G+ D LK RSMVLPD +ID SPAD +G+++ I A VL +LG Sbjct: 464 HMVATAAAHDDGPIAFRYPRGEGVGVEMP--ELGKVLEIGKGRMIQKGARVALLSFGTRLTEVQKAAEALAARGITPTIADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQLLADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLDVLG 633
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_AGRVS (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dxs PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.229e-44 Identity = 90/173 (52.02%), Postives = 119/173 (68.79%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG G+G +P +G L IGKGRI+ EG +VA+L +G+ + +C++AA L + + TVADARF KPLD DLIRQLA H +LITVEEG+VGGFGS V H L G+LD LK+RS+VLPD ++D P E++GL ++ I +TV + L R Sbjct: 460 HMVRTAAAYDEGPISFRYPRGEGVGVQMP--ERGEILPIGKGRIIKEGSKVALLSFGTRLAECLVAAEDLDAAGLPTTVADARFAKPLDLDLIRQLARHHAVLITVEEGAVGGFGSQVLHMLANEGLLDHGLKVRSLVLPDLWMDQAKPDVMYEKAGLDAKGIVSTVFTALSR 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.229e-44 Identity = 86/173 (49.71%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + +C+ AA L + +S TVADARF KPLD DLIRQLA HE+L+T+EEGSVGGFG+HV HF+ +G+LD K+R++ LPD++++ P +GL I +TV + LG+ Sbjct: 460 HMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS1_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs1 PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.919e-44 Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HM+ATA D+ P FRFPRG G+G +P +GT LE G+GR++ EG VAIL +G+ + + + AA +L+++ +SVTVADARF +PLDT LI QL H L+TVE+G++GGFG+HV H+L SG DG L LR M LPDR+I+ SP D ++GL + I+AT L R Sbjct: 463 HMIATAVAFDEGPIAFRFPRGEGVGVEMP--ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKLLEAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALAR 633
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHOPT (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.165e-43 Identity = 85/173 (49.13%), Postives = 121/173 (69.94%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMVAT IDDRPS R+PRG G G +P G PLEIGKGR++ +G++VA+L +G+ + + AA+ L + +S TVADARF KPLD +L+ +LA +HE+L+T+EEGS+GGFGSHV L G+LDG +K+R++VLPD ++DH +P +GL ++ I V +LG+ Sbjct: 461 HMVATQVAIDDRPSAVRYPRGEGRGVEMP--EVGIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHOPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris GN=dxs PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.165e-43 Identity = 85/173 (49.13%), Postives = 121/173 (69.94%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMVAT IDDRPS R+PRG G G +P G PLEIGKGR++ +G++VA+L +G+ + + AA+ L + +S TVADARF KPLD +L+ +LA +HE+L+T+EEGS+GGFGSHV L G+LDG +K+R++VLPD ++DH +P +GL ++ I V +LG+ Sbjct: 461 HMVATQVAIDDRPSAVRYPRGEGRGVEMP--EVGIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHIME (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium meliloti GN=dxs PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.165e-43 Identity = 89/173 (51.45%), Postives = 117/173 (67.63%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D+ P FR+PRG G+G LP +G L IGKGRI+ +G++VA+L +G+ + C+LAA L + +S TVADARF KPLD DLIRQLA HE+LIT+EEG+VGGF SHV FL G++DG LK+R MV+PD +++ P +GL I +TV LG+ Sbjct: 465 HMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKALGQ 635
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHOPB (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=dxs PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.521e-43 Identity = 85/173 (49.13%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMVAT I+DRPS R+PRG G G +P G LEIGKGRI+ EG+++A+L +G+ + +C AA+ L + +S T+ADARF KPLD +L+ +LA +HEIL+T+EEGS+GGFGSHV L G+LDG +++RS+VLPD ++DH +P +GL ++ I V LG+ Sbjct: 461 HMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGIALEIGKGRIVREGNKIALLSFGTRLAECEKAADELATLGLSTTIADARFMKPLDVELVLKLARDHEILLTIEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPTAMYARAGLDAKGIVKKVFEALGK 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.521e-43 Identity = 88/173 (50.87%), Postives = 121/173 (69.94%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D P FR+PRG G+G LP +G LEIGKGR+L EG RVA++ +G+ + + ++AA+ L ++ +S TVADARF KPLD DL+R+LA EHE+L+ VEEG++GGFG+H+ FL G+L+ LK+R++ PD Y++HGSP L GL + I TV + LGR Sbjct: 460 HMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALIAEGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 630 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |