CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PSYIN (1-deoxy-D-xylulose-5-phosphate synthase OS=Psychromonas ingrahamii (strain 37) GN=dxs PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.214e-16 Identity = 53/160 (33.12%), Postives = 89/160 (55.62%), Query Frame = -1 Query: 277 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD-----QLEESGLSSRHIS 738 ++P+ R+PRG G G + N + + L IGK +++ EG +AIL +G+ +QQ A L + T+ D RF KPLD +L+ LA+ H+ +T+EE S+ GG GS V + I L + +PDR+I+ G+ + +L+ +G+ + +S Sbjct: 467 NQPAAVRYPRGTGTG--IEINKQMSRLTIGKAKVVKEGKNLAILCFGTFLQQAYSVAEKLNA-----TLVDMRFVKPLDKELLDNLASTHKEFVTIEENSIAGGAGSAVNEYFMSQQIKTSVLNIG---IPDRFIEQGTQQEIYTLLELDSAGIEKQIVS 616
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_XANAC (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthomonas axonopodis pv. citri GN=dxs PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.585e-16 Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = -1 Query: 265 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 732 P+ R+PRG G GA L + P IGK ++ G R+A+LG+G+ V A +++ +TV + RF KPLD L+ +LA H+ +T+E+ V GG GS V L I + L + LPD + H S D L E+G+ I A +L Sbjct: 473 PAAVRYPRGTGPGAALDASLATLP--IGKAQLRHSGTRIALLGFGATVD-----AAEAVGRELGLTVVNMRFVKPLDKALLLELAKTHDGFVTIEDNVVAGGAGSGVSELLNAEAI---TMPLLHLGLPDSFQHHASREDLLAEAGIDQAGIRAALL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CLOP1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dxs PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.585e-16 Identity = 51/161 (31.68%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P R+PRG I L +K +E GK + EGD++AI+ G +VQ ++AA +K + +I + + +A F KP+D +L+ L+ + ++T+E+ GGFG V +L G + K+ ++ D++I+HG P + +GL + I T++ LL Sbjct: 465 PLAIRYPRGGDIDVNLKPLSK---IEYGKWEKVQEGDKIAIVATGKMVQHAMIAAQKIKEEKNIDILIINATFIKPIDKELLNSLSKDGFKIVTIEDNIKKGGFGEGVLEYLNEIGHKE---KIVTLAFNDKFIEHGKPDILYKINGLDAEGIKNTLIELL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BAUCH (1-deoxy-D-xylulose-5-phosphate synthase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=dxs PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.071e-16 Identity = 62/173 (35.84%), Postives = 92/173 (53.18%), Query Frame = -1 Query: 250 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 765 M+ T ++ PS R+PRGNGIG L +GK + +G ++AIL +G+++ Q A + K+ D T+ D RF KPLD +LI QLA H+ L+T+EE +V GG GS V +L +L + + ++ LPD +I GS + E L S I + L R Sbjct: 462 MLHTGYHYNNGPSAVRYPRGNGIGVEYSLLRI---LPLGKAIVCRQGTKIAILNFGTLLTQ---AKKVAKTFD--ATLVDMRFVKPLDIELINQLAISHQALVTLEENAVIGGAGSGVNEYLMRQRLL---VPVLNIGLPDYFIPQGSQEEIRAELKLDSDGIMEQIKQWLAR 623
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_AERS4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Aeromonas salmonicida (strain A449) GN=dxs PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.071e-16 Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = -1 Query: 268 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 738 ++P+ R+PRG+G G + + LE+GKGRI+ G AIL +G+++QQ AA L + T+ D RF KP+D L+ LA H+ +T+E+ ++ GG GS V L + L L LPDR+++ G+ + GL S I A++ Sbjct: 468 NQPAAVRYPRGSGTG--IEVQTEMQVLELGKGRIVRNGKGTAILAFGTLLQQARAAAEALDA-----TLVDMRFVKPMDEALVLSLAASHDQFVTIEDNAIMGGAGSAVNELLMRNKQCKPVLNLG---LPDRFVEQGTQEEIYALLGLDSTGIQASI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PECCP (1-deoxy-D-xylulose-5-phosphate synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=dxs PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.704e-16 Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRGNG G L ++ L IGKG + +G+ +AIL +G+++ + +AA + ++ T+ D RF KPLD L+ +LA H +T+EE ++ GG GS V FL + + + ++ LPD +I GS + + GL + I + Sbjct: 472 PTAVRYPRGNGTGTELTPLSE---LPIGKGVVRRQGETIAILNFGTLLPEAQIAA-----EKLNATLVDMRFVKPLDEALLEELAQSHSTFVTLEENAIMGGAGSGVNEFLMAKRL---AVSVLNIGLPDVFIPQGSQEEIRADLGLDAAGIERKI 616
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PASMU (1-deoxy-D-xylulose-5-phosphate synthase OS=Pasteurella multocida GN=dxs PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.704e-16 Identity = 53/162 (32.72%), Postives = 85/162 (52.47%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 ++P+ R+PRGN IG L T L +GK ++ EG+++AIL +G+++ + A L + TV D RF KP+D + I Q+A H++++T+EE + GG GS V L KL + LPD +I G+ + L + L I + + L Sbjct: 464 NQPAAVRYPRGNAIGVELTPL---TMLALGKSNLIREGEKIAILNFGTLLPTAINVAEKLNA-----TVIDMRFVKPIDVERIHQIAQTHDLIVTLEENVIQGGAGSAVAEVLHSQ---QHQTKLLQLGLPDFFIPQGTQQEILADLHLDEAGIETQIKNFL 614
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MANSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=dxs PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.704e-16 Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = -1 Query: 256 RPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 735 +P+ R+PRGN IG L K LEIGK ++ +G +AIL +G+++ + A L + TV D RF KPLD + I +LA H L+T+EE ++ GG GS V + I + + + LPD ++ G+ + L+E L + I + + L Sbjct: 465 KPAAVRYPRGNAIGVELEPLRK---LEIGKSNLVRQGQDIAILNFGTLLPNALDVAEKLNA-----TVVDMRFVKPLDHERINELAKTHRTLVTLEENTIQGGAGSAVSEVV---NIQQHHVNILHLGLPDEFVAQGTQQEVLKELKLDATGIEEQIKNFL 614
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CARHZ (1-deoxy-D-xylulose-5-phosphate synthase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dxs PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.704e-16 Identity = 55/162 (33.95%), Postives = 84/162 (51.85%), Query Frame = -1 Query: 250 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 732 P R+PRG +G L + L IG IL EG ++G G + + AA L+++ IS+TV DARF KPLD L+ ++ + H+ +ITVEE V GGFGS V + + GI K+ ++ + D + HG + L GL+ + +L + Sbjct: 466 PVALRYPRGAAVGVELTPYEQ---LPIGTAEILKEGSDGVVIGVGRPLNYALKAAQKLENEGISLTVIDARFVKPLDYKLLEEVGSLHKPVITVEENVVAGGFGSAVNEYFSFRGI---GTKVVNLGIADEFPPHGKVEEILNLYGLTEEKLYLKFREILSK 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SODGM (1-deoxy-D-xylulose-5-phosphate synthase OS=Sodalis glossinidius (strain morsitans) GN=dxs PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16 Identity = 57/156 (36.54%), Postives = 85/156 (54.49%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 PS R+PRGN GA L ++ L +GKG + +G VAIL +G+++ Q AA Q I+ T+ D RF KPLD LI +LA H+ L+TVEE ++ GG GS V ++ + + + ++ LPD +I GS + + GL I + Sbjct: 471 PSTVRYPRGNSTGAPLTDLHE---LPLGKGVVHRQGAGVAILNFGTLLPQAEHAA-----QAINATLVDMRFVKPLDDTLISELAASHQALVTVEENAIMGGAGSGVNEYVMQQRL---QVPVLNIGLPDHFIPQGSQEEIRADLGLDGAGIQRQI 615 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |