CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CLOPE (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens GN=dxs PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16 Identity = 50/161 (31.06%), Postives = 89/161 (55.28%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P R+PRG I L +K +E GK + EG+++AI+ G +VQ ++AA +K + +I + + +A F KP+D +L+ L+ + ++T+E+ GGFG V +L G + K+ ++ D++I+HG P + +GL + I T++ LL Sbjct: 465 PLAIRYPRGGDIDVNLKPLSK---IEYGKWEKVQEGEKIAIVATGKMVQHAMIAAQKIKEEKNIDILIINATFIKPIDKELLNSLSKDGFKIVTIEDNIKKGGFGEGVLEYLNEIGHKE---KIVTLAFNDKFIEHGKPDILYKINGLDAEGIKNTLIELL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_XYLFA (1-deoxy-D-xylulose-5-phosphate synthase OS=Xylella fastidiosa GN=dxs PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.868e-16 Identity = 56/158 (35.44%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 262 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 732 P R+PRG G G V + + L +G ++ G R+A+LG+G CV A + + + +TV + RF KPLD L+ +LA HE +T+E+ V GG GS V L GI+ L + + LPD + H S D L E+G+ + + A +LS Sbjct: 472 PVAVRYPRGTGPGVV--PSAELDVLPVGVAQLRHSGTRIALLGFGV----CVAPAEQV-GRRLGLTVVNMRFIKPLDRTLLLELARTHEGFVTIEDNVVAGGAGSGVAELLNAEGIV---LPIVHLGLPDAFQQHASREDLLAEAGIDAAGVYAALLS 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CLOPS (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium perfringens (strain SM101 / Type A) GN=dxs PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.868e-16 Identity = 50/161 (31.06%), Postives = 88/161 (54.66%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P R+PRG I L +K +E GK + EG+++AI+ G +VQ ++AA +K + +I + + +A F KP+D +L+ L+ + ++T+E+ GGFG V +L G + K+ ++ D++I+HG P +GL + I T++ LL Sbjct: 465 PLAIRYPRGGDIDVNLKPLSK---IEYGKWEKVQEGEKIAIVATGKMVQHAMIAAQKIKEEKNIDILIINATFIKPIDKELLNSLSKDGFKIVTIEDNIKKGGFGEGVLEYLNEIGHEE---KIVTLAFNDKFIEHGKPDILYRINGLDAEGIKNTLIELL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ACIAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Acinetobacter sp. (strain ADP1) GN=dxs PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.868e-16 Identity = 55/162 (33.95%), Postives = 86/162 (53.09%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANMLKS-QDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRG G+G + + T LEIGK ++++ + + IL +GS V + AA L DI +TV + RF KPLD +IR LA ++ +T+EE +V G GS V +L + I+ L L LPD ++ + L+ GL + I A++ Sbjct: 473 PAAVRYPRGAGLGVEI--QQELTKLEIGKAEMVLQCHPEHDEHITILAFGSRVSVAMEAAQQLAQLHDIGITVVNMRFVKPLDEQIIRDLAERTQLFVTIEEHAVMAGAGSAVNEYLAKAQIMKPTLNLG---LPDTFMAQATHTQMLKNCGLDAEGIQASI 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HAEDU (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus ducreyi GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 56/172 (32.56%), Postives = 92/172 (53.49%), Query Frame = -1 Query: 268 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISV----TVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 768 H + A P+ R+PRGN G L + L +GK RI+ +G +VAIL +G+++ + +Q++++ T+ D RF KPLD LI +LA+ H +L+T+EE ++ GG GS V +L G + PL L + LPD +I + + + GL ++ I + Sbjct: 456 HQMLYTAYKMQTPTAIRYPRGNARGIALQPMAE---LAVGKARIIHQGKKVAILNFGALLSE---------AQEVAISHNYTLVDMRFVKPLDKTLISELADSHSLLVTLEENAIQGGAGSAVNEYLQQIGKIK-PLVL--IGLPDMFIPQSTQQESYADFGLDAKGIDQKI 612
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRATW (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 53/160 (33.12%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG GIGA + + LE+GK +I+ +G ++AIL +G+++ LA + ++ TV D RF KPLD ++ +++ HEI++T+EE + GG GS V + L + +R+ L D++++HG+ L +S L +IS + L+ Sbjct: 465 PAMVRYPRGAGIGAEITGS---LDLELGKAKIVKQGSKIAILNFGTLLP---LAKQL--AEKYHATVIDMRFVKPLDEIMLDKVSQTHEIILTLEENCIAGGAGSAVNEYFVAKD-LSNKIIVRNFGLQDKFLNHGTKDLLLAQSKLCVENISQELDKLI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRATT (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis subsp. tularensis GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 53/160 (33.12%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG GIGA + + LE+GK +I+ +G ++AIL +G+++ LA + ++ TV D RF KPLD ++ +++ HEI++T+EE + GG GS V + L + +R+ L D++++HG+ L +S L +IS + L+ Sbjct: 465 PAMVRYPRGAGIGAEITGS---LDLELGKAKIVKQGSKIAILNFGTLLP---LAKQL--AEKYHATVIDMRFVKPLDEIMLDKVSQTHEIILTLEENCIAGGAGSAVNEYFVAKD-LSNKIIVRNFGLQDKFLNHGTKDLLLAQSKLCVENISQELDKLI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRATO (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 53/160 (33.12%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG GIGA + + LE+GK +I+ +G ++AIL +G+++ LA + ++ TV D RF KPLD ++ +++ HEI++T+EE + GG GS V + L + +R+ L D++++HG+ L +S L +IS + L+ Sbjct: 465 PAMVRYPRGAGIGAEITGS---LDLELGKAKIVKQGSKIAILNFGTLLP---LAKQL--AEKYHATVIDMRFVKPLDKIMLDKVSQTHEIILTLEENCIAGGAGSAVNEYFVAKD-LSNKIIVRNFGLQDKFLNHGTKDLLLAQSKLCVENISKELDKLI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRATN (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 53/160 (33.12%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG GIGA + + LE+GK +I+ +G ++AIL +G+++ LA + ++ TV D RF KPLD ++ +++ HEI++T+EE + GG GS V + L + +R+ L D++++HG+ L +S L +IS + L+ Sbjct: 465 PAMVRYPRGAGIGAEITDS---LDLELGKAKIVKQGSKIAILNFGTLLP---LAKQL--AEKYHATVIDMRFVKPLDEIMLDKVSQTHEIILTLEENCIAGGAGSAVNEYFVAKD-LSNKIIVRNFGLQDKFLNHGTKDLLLAQSKLCVENISQELDKLI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRATH (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 53/160 (33.12%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG GIGA + + LE+GK +I+ +G ++AIL +G+++ LA + ++ TV D RF KPLD ++ +++ HEI++T+EE + GG GS V + L + +R+ L D++++HG+ L +S L +IS + L+ Sbjct: 465 PAMVRYPRGAGIGAEITGS---LDLELGKAKIVKQGSKIAILNFGTLLP---LAKQL--AEKYHATVIDMRFVKPLDKIMLDKVSQTHEIILTLEENCIAGGAGSAVNEYFVAKD-LSNKIIVRNFGLQDKFLNHGTKDLLLAQSKLCVENISKELDKLI 615 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |