CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRATF (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 53/160 (33.12%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG GIGA + + LE+GK +I+ +G ++AIL +G+++ LA + ++ TV D RF KPLD ++ +++ HEI++T+EE + GG GS V + L + +R+ L D++++HG+ L +S L +IS + L+ Sbjct: 465 PAMVRYPRGAGIGAEITGS---LDLELGKAKIVKQGSKIAILNFGTLLP---LAKQL--AEKYHATVIDMRFVKPLDKIMLDKVSQTHEIILTLEENCIAGGAGSAVNEYFVAKD-LSNKIIVRNFGLQDKFLNHGTKDLLLAQSKLCVENISKELDKLI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRAT1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dxs PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.028e-15 Identity = 53/160 (33.12%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG GIGA + + LE+GK +I+ +G ++AIL +G+++ LA + ++ TV D RF KPLD ++ +++ HEI++T+EE + GG GS V + L + +R+ L D++++HG+ L +S L +IS + L+ Sbjct: 465 PAMVRYPRGAGIGAEITGS---LDLELGKAKIVKQGSKIAILNFGTLLP---LAKQL--AEKYHATVIDMRFVKPLDEIMLDKVSQTHEIILTLEENCIAGGAGSAVNEYFVAKD-LSNKIIVRNFGLQDKFLNHGTKDLLLAQSKLCVENISQELDKLI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_XANC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dxs PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.342e-15 Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = -1 Query: 265 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 732 P+ R+PRG G G L + P IGK ++ G R+A+LG+G+ V A +++ +TV + RF KPLD ++ +LA H+ +T+E+ V GG G+ V L I + + + LPD + H S D L E+G+ I A VL Sbjct: 473 PAAVRYPRGTGPGVALDASLATLP--IGKAQLRHSGTRIALLGFGATVD-----AAEAVGRELGLTVVNMRFVKPLDKAMLLELAKTHDGFVTIEDNVVAGGAGAGVSELLNAEAI---TMPMLHLGLPDSFQHHASREDLLAEAGIDQAGIRAAVL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ERWT9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=dxs PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.342e-15 Identity = 56/152 (36.84%), Postives = 84/152 (55.26%), Query Frame = -1 Query: 295 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPAD-----QLEESGL 732 PS R+PRGNG GA L L +GKG + G+++AIL +G+++ Q A + I+ T+ D RF KPLD L+ +LA +H+ LIT+EEGS+ GG GS V L + + ++ LPD +I G+ + QL+ G+ Sbjct: 471 PSAVRYPRGNGTGAPLEAL---ASLPLGKGVVKRRGEKMAILNFGTLLPQAAEVA-----EAINATLVDMRFVKPLDEALVLELAAQHQSLITLEEGSIKGGAGSGVNELLMAK---RRAIPVLNIGLPDEFIPPGTQDEIRSDYQLDADGI 611
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PORGI (1-deoxy-D-xylulose-5-phosphate synthase OS=Porphyromonas gingivalis GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15 Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = -1 Query: 247 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRP 768 +++ TA D P R+PRG G+ + N +EI +GR L EG+ +A L G + L + +S D F KPLD +++ +A + + +I+VE+G + GGFGS V F+ D ++R + +PDR+I GS +Q + G+ + + LL P Sbjct: 465 NLMLTAYKGYDGPMVIRYPRGKGV--LTDWRNTPRLVEIARGRCLTEGEAIAFLSIGPIGNMVQKVVERLAEKGVSAAHYDMVFLKPLDEEMLHGIAKKFDTIISVEDGCIQGGFGSAVMEFMADH---DYHPRIRRVGVPDRFIGQGSVPEQYADCGMDADSLLHLTEELLLHP 634
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PORG3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15 Identity = 53/175 (30.29%), Postives = 87/175 (49.71%), Query Frame = -1 Query: 247 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRP 768 +++ TA D P R+PRG G+ + N +EI +GR L EG+ +A L G + L + +S D F KPLD +++ +A + + +I+VE+G + GGFGS V F+ D ++R + +PDR+I GS +Q + G+ + + LL P Sbjct: 465 NLMLTAYKGYDGPMVIRYPRGKGV--LTDWRNTPRLVEIARGRCLTEGEAIAFLSIGPIGNMVQKVVERLAEKGVSAAHYDMVFLKPLDEEMLHGIAKKFDTIISVEDGCIQGGFGSAVMEFMADH---DYHPRIRRVGVPDRFIGQGSVPEQYADCGMDADSLLHLTEELLLHP 634
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PELTS (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15 Identity = 57/169 (33.73%), Postives = 86/169 (50.89%), Query Frame = -1 Query: 265 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVL 768 HM+ TA + P+ R+PR G G + + K PL G+ +L +G V +L GS+V V AA +L I V +ARF KPLD + I + A + T+EE + GGFGS V L+ G + + + +PD +++HG+ A L GL+ + VL Sbjct: 455 HMLYTA-LSHPGPAAVRYPRSAGTGCRMDDSFKIIPL--GRAEVLRDGTEVTLLAVGSMVCLAVKAAEILAGHGIDAAVINARFVKPLDKECILRYARRTREVFTLEENVLQGGFGSAVQELLSSCG--ERGVSVHCFGIPDSFVEHGNRALLLARYGLTVEQVVRAVL 618
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ALKOO (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkaliphilus oremlandii (strain OhILAs) GN=dxs PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.753e-15 Identity = 54/153 (35.29%), Postives = 87/153 (56.86%), Query Frame = -1 Query: 280 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME-GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHI 732 P R+PRG+ + + +PL +GKG I G+ V IL G+ + + L+ +I T+ + RF KP+D +LI ++ +H+I+ T+E+ S +GGFG+ V L + IL P+K+ LPDR+I+HG+ D EE GL+ + I Sbjct: 467 PVAIRYPRGH---SNMDSQENFSPLALGKGEITYHSGNDVLILALGTFNKMGLEICKDLEENNIFSTLMNPRFIKPMDEELIVEMVQKHKIIYTIEDNSKIGGFGTLVQVLLNDNQILK-PVKV--CALPDRFIEHGNVEDLYEELGLTKKQI 613
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BUCAT (1-deoxy-D-xylulose-5-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=dxs PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.289e-15 Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = -1 Query: 325 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 765 M+ T + + PS R+P+G G+GA+L N+ + IGK I G ++AIL +G ++ AA L + T+ D RF KPLD +I +L+++++ IT+EEG + GG GS V F+ ++ I L + ++ LPD +I G+ Sbjct: 447 MLYTGYMHNKGPSVVRYPKGYGVGALLMPMNR---IPIGKSLIKRRGKKIAILNFGILLHNAYCAAEKLDA-----TLVDMRFVKPLDKSMILKLSSQNKFFITLEEGVISGGAGSAVNEFIMVNKIF---LPVLNIGLPDTFIPQGT 583
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BUCA5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=dxs PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.289e-15 Identity = 52/148 (35.14%), Postives = 85/148 (57.43%), Query Frame = -1 Query: 325 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 765 M+ T + + PS R+P+G G+GA+L N+ + IGK I G ++AIL +G ++ AA L + T+ D RF KPLD +I +L+++++ IT+EEG + GG GS V F+ ++ I L + ++ LPD +I G+ Sbjct: 447 MLYTGYMHNKGPSVVRYPKGYGVGALLMPMNR---IPIGKSLIKRRGKKIAILNFGILLHNAYCAAEKLDA-----TLVDMRFVKPLDKSMILKLSSQNKFFITLEEGVISGGAGSAVNEFIMVNKIF---LPVLNIGLPDTFIPQGT 583 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |