CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ERWCT (1-deoxy-D-xylulose-5-phosphate synthase OS=Erwinia carotovora subsp. atroseptica GN=dxs PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.990e-15 Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRGNG G L ++ L IGKG + +G VAIL +G+++ + A + ++ T+ D RF KPLD L+ +LA H +T+EE +V GG GS V FL + + + ++ LPD +I GS + + GL + I + Sbjct: 472 PTAVRYPRGNGTGTELTPLSE---LPIGKGVVRRQGKTVAILNFGTLLPEAQAVA-----EKLNATLVDMRFVKPLDEALLEELAQSHSTFVTLEENAVMGGAGSGVNEFLMAKRL---AVSVLNIGLPDVFIPQGSQEEIRVDLGLDAAGIERRI 616
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_METCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylococcus capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.905e-15 Identity = 57/160 (35.62%), Postives = 84/160 (52.50%), Query Frame = -1 Query: 268 IDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 744 I D P+ R+PRG G G V P T +GKG + + G AIL +G+ LAA + + I TVA+ RF KPLD LI +LA H+ ++TVEE ++ GG GS V FL + + + L D ++D G+ + L +GL I+ ++ Sbjct: 466 IHDGPAAVRYPRGRGPG-VRPEETM-TAFPVGKGEVRLRGKGTAILAFGTP-----LAAALAVGERIGATVANMRFVKPLDEALILELAATHDRIVTVEENAIAGGAGSAVGEFLAAQHC---GIPVCHIGLKDEFLDQGTREELLAIAGLDQAGIARSI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_EXIS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=dxs PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.905e-15 Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = -1 Query: 241 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKE 753 +AV + P RFPRG GIG +P + + + + EG VAI+ +G VQ + A +L+ D+SV V +AR KPLD ++ L E L+T+EE + GGFGS V L + + +++ +PD YI+HG + LEE GL I+ V S + + K+ Sbjct: 460 SAVKYEGPIAVRFPRGEGIG--VPMDETLHEISLDTWDVEREGTDVAIMAFGPQVQDALKIAELLEG-DVSVRVINARTIKPLDEKMLNALYAEGIPLVTLEEAVLKGGFGSAV---LEHANEQEAFPRVKRFGIPDWYIEHGGVNELLEEIGLLPGQIAEEVRSFVNQGKK 625
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ACIBS (1-deoxy-D-xylulose-5-phosphate synthase OS=Acinetobacter baumannii (strain SDF) GN=dxs PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.905e-15 Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 280 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANML-KSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHI 732 P+ R+PRG G+G + + T LE+GK I+ E +++ +L +GS V + AA + D+SV V + RF KPLD +IR LA + +TVEE ++ GG GS V F+ I+ + L LPD ++ + L++ GL ++ I Sbjct: 470 PAAVRYPRGAGVGVEI--QKEMTVLELGKAEIVAEIKANSDEQITVLAFGSRVMVALEAAEQFAQKHDVSVCVVNMRFVKPLDEQMIRDLAEHTHLFVTVEEHAIMGGAGSAVNEFMAQEQIVKPIINLG---LPDSFLHQATHNQMLQDCGLDAKGI 622
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS2_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Streptomyces avermitilis GN=dxs2 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.905e-15 Identity = 55/173 (31.79%), Postives = 90/173 (52.02%), Query Frame = -1 Query: 250 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME----GDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 753 A +DD P+ RF +G +G +P + IG +L E V ++ G++ C+ A +L Q IS TV D R+ KP+D + + LA H +++TVE+ S VGG GS + L +G+ + LR +P R++DH S + + E GL++ I+ V L+ + Sbjct: 460 AVDVDDAPTVVRFSKG-AVGPAVPAVGR-----IGGMDVLREPGTDAPDVLLVSVGALAPMCLEIAGLLDKQGISATVVDPRWVKPVD-EAMAPLAERHRVVVTVEDNSRVGGVGSAIAQALRDAGV---DVPLRDFGIPPRFLDHASRGEVMAEIGLTAPDIARQVTGLVSK 622
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_HAMD5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dxs PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.100e-15 Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRG G G L PL IGK I ++G+++A+L +G+++ A L + T+ D RF KPLDT+LI +A+ H +L+T+EE + GG GS V L + L ++ LPD++I G + GL SR I + Sbjct: 470 PAAVRYPRGQGTGVALQPL---FPLTIGKSEIKIQGEKIALLCFGTLLSVAREVAIHLNA-----TLVDMRFIKPLDTELILAMASNHSLLVTIEENVIKGGAGSAVNECLMSH---KKTVMLLNIGLPDQFIPQGEQNEMRAAYGLDSRGIQKQI 614
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRATM (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=dxs PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.100e-15 Identity = 52/160 (32.50%), Postives = 92/160 (57.50%), Query Frame = -1 Query: 256 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 732 P+ R+PRG GIGA + + LE+GK +I+ +G ++AIL +G+++ LA + ++ TV D RF KPLD ++ +++ +EI++T+EE + GG GS V + L + +R+ L D++++HG+ L +S L +IS + L+ Sbjct: 465 PAMVRYPRGAGIGAEITGS---LDLELGKAKIVKQGSKIAILNFGTLLP---LAKQL--AEKYHATVIDMRFVKPLDEIMLDKVSQTYEIILTLEENCIAGGAGSAVNEYFVAKD-LSNKIIVRNFGLQDKFLNHGTKDLLLAQSKLCVENISQELDKLI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ACIBY (1-deoxy-D-xylulose-5-phosphate synthase OS=Acinetobacter baumannii (strain AYE) GN=dxs PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.100e-15 Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = -1 Query: 280 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILME-----GDRVAILGYGSVVQQCVLAANML-KSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHI 732 P+ R+PRG G+G + + T LE+GK I+ E +++ +L +GS V + AA + D+SV + + RF KPLD +IR LA + +TVEE ++ GG GS V F+ I+ + L LPD ++ + L++ GL ++ I Sbjct: 470 PAAVRYPRGAGVGVEI--QKEMTVLELGKAEIVAEIKANSDEQITVLAFGSRVMVALEAAEQFAQKHDVSVCIVNMRFVKPLDEQMIRDLAEHTHLFVTVEEHAIMGGAGSAVNEFMAQEQIVKPIINLG---LPDSFLHQATHNQMLQDCGLDAKGI 622
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_AERHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=dxs PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.661e-15 Identity = 53/156 (33.97%), Postives = 82/156 (52.56%), Query Frame = -1 Query: 268 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 732 P+ R+PRG+G G + ++ L +GKGRI+ +G AIL +G+++QQ AA L T+ D RF KP+D L+ LA H+ +T+E+ ++ GG GS V L S L L LPDR+++ G+ + GL I ++ Sbjct: 470 PAAVRYPRGSGTG--IQVESEMQALALGKGRIVRQGKGTAILAFGTLLQQAKAAAEAL-----DATLVDMRFVKPMDEALVFSLAATHDQFVTLEDNAIMGGAGSAVNELLMRSKQCKPVLNLG---LPDRFVEQGTQEEIYALLGLDGTGIQRSI 615
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_ACIC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=dxs PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.661e-15 Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = -1 Query: 310 AVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQL 750 A++ D PS R+PRG G G + + P IGK ++L EG+ +AILG G+++ L Q V + RF KP+DT+L+ A+ +T+E+ +GGFGS V L G +++ PDR+I+HG DQL Sbjct: 458 AMLHDGPSAIRYPRGTGPGHAVKQQPEALP--IGKAKVLHEGEDIAILGLGALLPMAEQIREELARQGYRAAVINPRFVKPVDTELLAHYADRVTAFLTLEDHVLMGGFGSAVMEELNALGKSTPVVRIG---WPDRFIEHGK-VDQL 599 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |