CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NITWN (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.389e-43 Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPL-KLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMVAT I+DRPS R+PRG G G +P G PL IGKGRI+ +G ++A+L +G+ + +C AA+ L + +S T+ADARF KPLD DL +LA EH++LIT+EEGS+GGFGSHV L +G LDG L ++RSM+LPD ++DH +P +GL ++ I A V LG+ Sbjct: 485 HMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLALKLAREHDVLITIEEGSIGGFGSHVMQTLMDNGALDGGLVRVRSMILPDEFLDHDTPTAMYARAGLDAKGIVAKVFEALGK 656
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.426e-43 Identity = 88/172 (51.16%), Postives = 116/172 (67.44%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 HMVATAA D+ P FR+PRG+G+G +P KG PL+IG+GR++ EG R+A+L +G+ + + +AA L ++ IS TVADARF KPLD DLI QLA HE LIT+EEG++GGFGSHV L +G+ D + RSMVLPD +IDH S +GL++ I L LG Sbjct: 460 HMVATAAAHDEGPIAFRYPRGDGVGVEMPV--KGVPLQIGRGRVVSEGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHIE6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=dxs PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.550e-43 Identity = 90/173 (52.02%), Postives = 117/173 (67.63%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TA D P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + C+LAA L++ +S TVADARF KPLD DLIRQLA HE+LITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV LGR Sbjct: 460 HMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAAGLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SILST (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter sp. (strain TM1040) GN=dxs PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.288e-42 Identity = 90/172 (52.33%), Postives = 115/172 (66.86%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 HMVATAA D P FR+PRG G G +P + LEIGKGRI+ EG RVA+L +G+ + + AA L ++ I+ TVADARF KPLD D+I LA +HE LIT+EEG+VGGFGSHV L+ + D LK RSMVLPD +ID SP D + + +++ HI A VL +LG Sbjct: 464 HMVATAAAYDAGPIAFRYPRGEGEGVEMPEQPE--VLEIGKGRIIEEGSRVALLSFGTRLGEVRKAAEALAARGITPTVADARFAKPLDRDMILSLAEKHEALITIEEGAVGGFGSHVAQLLSEEAVFDTGLKFRSMVLPDTFIDQASPKDMYDSAAMNAEHIEAKVLDVLG 633
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.747e-42 Identity = 87/174 (50.00%), Postives = 116/174 (66.67%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMVAT I+DRPS R+PRG G G +P G PL IGKGRI+ +G +VA+L G+ + +C AA+ L + +S T+ADARF KPLD DL+ +LA +H++LIT+EEGS+GGFGSHV L G LD G +++R+MVLPD ++DH +P GL R I A V LG+ Sbjct: 487 HMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKVALLSLGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CAUSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter sp. (strain K31) GN=dxs PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.348e-42 Identity = 87/172 (50.58%), Postives = 117/172 (68.02%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 HMV+TA IDDRPS FR+PRG G+G +P + PLEIGKGRI+ EG VAI+ G+ + +C+ AA++L ++ +S TVADARF KPLD D++ +LA EHE +ITVEEG++GGFG+ V L G LD LK+R++VLPD + D P ++GL + I LS LG Sbjct: 458 HMVSTAVAIDDRPSAFRYPRGEGLGLTIP--DLAAPLEIGKGRIVREGTSVAIVSLGTRLAECLKAADLLAARGLSATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALATHGALDRGLKIRTLVLPDVFQDQDKPDLMYAQAGLDAEGILRGALSALG 627
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.424e-41 Identity = 88/173 (50.87%), Postives = 114/173 (65.90%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TA D P FR+PRG G+G +P +G L IGKGRI+ EG +VA+L +G+ + C+LAA L + +S TVADARF KPLD DLIRQ A HE++ITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV LGR Sbjct: 460 HMVRTAVAYDAGPISFRYPRGEGVGVDMPV--RGEILRIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQFARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.424e-41 Identity = 90/172 (52.33%), Postives = 112/172 (65.12%), Query Frame = -1 Query: 253 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 768 HMVATA DD P FRFPRG G G +P G LEIGKGRI+ EG RVAIL +G+ + + A L ++ I+ T+ADARF KPLD ++I L HE LITVEEG++GGFGSHV L+ G+ D K RSMVLPD +ID SPAD +G+++ I VLS+LG Sbjct: 464 HMVATAVAHDDGPIAFRFPRGEGNGVDMP--EVGEVLEIGKGRIITEGTRVAILSFGTRLAEVQKAGEALAARGITPTIADARFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQLLSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.429e-41 Identity = 87/173 (50.29%), Postives = 117/173 (67.63%), Query Frame = -1 Query: 250 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 768 HMV TAA D P FR+PRG G+G +P +G L+IGKGRI+ EG +VA+L +G+ + C+LA+ L++ +S TVADARF KPLD +L+RQLA HE+LITVEEGSVGGFGS V +L+ G+LD LK+RS+V+PD +++ P +GL I +TV L R Sbjct: 460 HMVRTAAAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLASEDLEAAGLSTTVADARFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALRR 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.067e-41 Identity = 87/180 (48.33%), Postives = 120/180 (66.67%), Query Frame = -1 Query: 229 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 768 HMV TAA D P R+PRG G G +P +G LEIGKGR++ EG VAIL +G+ + Q + AA ML+++ +S TVADARFC+PLDTDLI +L H LIT+E+G++GGFG+ V H+L +G L+ +R+M LPD YIDHGSP + +GL++ I T L+ RP +++ I Sbjct: 461 HMVVTAAAHDSGPIALRYPRGEGRGVEMP--ERGEVLEIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLEAEGVSTTVADARFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLEKGRAIRTMTLPDCYIDHGSPEEMYAWAGLTANDIRDTALA-AARPSKSVRI 637 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |