CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_COLP3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=dxs PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.699e-15 Identity = 53/164 (32.32%), Postives = 87/164 (53.05%), Query Frame = -1 Query: 280 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGD----------RVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHI 738 D PS R+PRGNG G +LP ++ +E+GKG ++ +AIL +GS++ + AA +++ T+ D RF KPLD LI L +H+ L+TVE+ ++ GG GS V +L G P+ + ++ + D ++ HG+ + E L + I Sbjct: 468 DGPSVVRYPRGNGTGEILPSVDE--TIELGKGVTILTATVIESQEQTNKSIAILSFGSMLGEAKKAA-----LELNATLVDMRFVKPLDETLIDTLNAKHDCLVTVEDNAIAGGAGSGVNEYLLAQG---KPVTILNIGVTDHFVKHGTQEEMHHELELDAEGI 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_BUCAI (1-deoxy-D-xylulose-5-phosphate synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=dxs PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.699e-15 Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = -1 Query: 325 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 765 M+ T + + PS R+P+G G+G +L N+ + IGK I G ++AIL +G ++ AA L + T+ D RF KPLD +I +L+++++ IT+EEG + GG GS V F+ ++ I L + ++ LPD +I G+ Sbjct: 447 MLYTGYMHNKGPSVVRYPKGYGVGELLMPMNR---IPIGKSLIKRRGKKIAILNFGILLHNAYCAAEKLDA-----TLVDMRFVKPLDKSMILKLSSQNKFFITLEEGVISGGAGSAVNEFIMVNKIF---LPVLNIGLPDTFIPQGT 583
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_LISMO (1-deoxy-D-xylulose-5-phosphate synthase OS=Listeria monocytogenes GN=dxs PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.484e-14 Identity = 51/173 (29.48%), Postives = 91/173 (52.60%), Query Frame = -1 Query: 250 MVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 765 ++ TA +D P R+PRG G + +N T + IG+ +++ IL +G ++ + AA L+ + V V +AR+ KPLD L+ ++ + ++TVEE + GGFG+ V F+ + D + + + LPD +I HGS + LE G+S+ + + +L + Sbjct: 432 LMDTAFSYNDGPFAIRYPRGEAPGVQVVESN--TLIPIGQWETIIQPLDAVILTFGPTIELALKAAEQLEIEGYRVGVINARYIKPLDEALLHKILKQKIPILTVEESLLKGGFGASVLEFIEANNYRD--VIMHRIGLPDEFISHGSVSIILESFGISTTGLVLKIKEMLAQ 600
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_STRGG (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 52/169 (30.77%), Postives = 89/169 (52.66%), Query Frame = -1 Query: 250 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 753 A +DD P+ RF +G +G + + ++I + D V I+ G++ C+ A++L +Q IS TV D R+ KP+D + + LA H +++TVE+ S GG GS V L +G+ + LR +P ++DH S + + E GL++ I+ V L+ + Sbjct: 460 AVAVDDAPTVVRFSKG-AVGPAVKAVGRAGGMDILRRPTAARPD-VLIVSVGALAPMCLEIADLLDAQGISSTVVDPRWVKPVD-EALAPLAERHRVVVTVEDNSRAGGVGSAVAQSLRDAGV---DVPLRDFGIPPVFLDHASRGEVMAEIGLTAPDIARQVTGLVAK 622
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_LAWIP (1-deoxy-D-xylulose-5-phosphate synthase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = -1 Query: 325 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGS 732 P R+P+GNG+G LP N+ TPL +G +L EG I+ GS+V AA L+ + ++S+ V D+R+ PL + +LAN ++ +EE ++ GGF S V + L G +++ + +P+ +IDHGS Sbjct: 478 PLAIRYPKGNGVGVTLP--NESTPLPF-EGELLKEGHDAIIIAIGSMVMPAYSAAQQLQEEKNLSIAVFDSRWISPLPQHQLIELANTFNNILLIEENALAGGFSSAVVELFADNQCLHGQ-RIQRIGIPNYFIDHGS 611
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_DESVV (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = -1 Query: 295 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 738 D P R+PRG G G +P +PL +G G +L EG+ VA++ GS V + AA L + TV DAR+ KPL + + H+ L+ VEE ++ GGF S V L L G +R + LPD +++ G+ + GL Sbjct: 473 DAPLAIRYPRGVGFG--IPLAESPSPLPVGVGEVLKEGEGVAVIAVGSRVHPSLEAAERLAEETGRHATVFDARWVKPLPEAQLLDIVARHDALLFVEENALAGGFSSAVLELLADRNALSGK-HIRRIGLPDEFVEQGTQKELRVSLGL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_DESVH (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=dxs PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 52/150 (34.67%), Postives = 76/150 (50.67%), Query Frame = -1 Query: 295 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQ-DISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGL 738 D P R+PRG G G +P +PL +G G +L EG+ VA++ GS V + AA L + TV DAR+ KPL + + H+ L+ VEE ++ GGF S V L L G +R + LPD +++ G+ + GL Sbjct: 473 DAPLAIRYPRGVGFG--IPLAESPSPLPVGVGEVLKEGEGVAVIAVGSRVHPSLEAAERLAEETGRHATVFDARWVKPLPEAQLLDIVARHDALLFVEENALAGGFSSAVLELLADRNALSGK-HIRRIGLPDEFVEQGTQKELRVSLGL 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_PARUW (1-deoxy-D-xylulose-5-phosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=dxs PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14 Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = -1 Query: 262 RPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 735 RP+ R+P N+ E+GKG +L+EG + I+ G + Q + ++L I TV D F KPLD++L +L H ++T+EE S V G GS + +FL G +++ ++ +P+ ++DHG D L E GL I + S Sbjct: 469 RPTAIRYPNL----MTEEFNHPICERELGKGEVLIEGTEILIVALGHMNQAALKVRDLLAQTGIEATVLDPIFVKPLDSELFCKLLLNHNKIVTIEEHSVVSGMGSIINNFLVGQGF--NQIQVLNLGIPEAFLDHGRNQDLLNEIGLVPEKIFRQIQS 621
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CHLTR (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis GN=dxs PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14 Identity = 54/165 (32.73%), Postives = 77/165 (46.67%), Query Frame = -1 Query: 262 PSCFRFPRGNGIGAVLPXNNKGT-------PLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 732 P R+P +P N K + P+ G+ IL +GD + ++ G + + L IS TV D F KPLD L++ L H +I +EE S+ GG GS FL I L S+ +PD +I HG+P L GL+S HI+ +LS Sbjct: 470 PCAIRYPN-------IPANEKASNSFFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGISTTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGSEFLLFLNQHNIKADVL---SLGVPDMFIPHGNPETILNLIGLTSDHITQRILS 624
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CHLTB (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=dxs PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14 Identity = 54/165 (32.73%), Postives = 77/165 (46.67%), Query Frame = -1 Query: 262 PSCFRFPRGNGIGAVLPXNNKGT-------PLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 732 P R+P +P N K + P+ G+ IL +GD + ++ G + + L IS TV D F KPLD L++ L H +I +EE S+ GG GS FL I L S+ +PD +I HG+P L GL+S HI+ +LS Sbjct: 470 PCAIRYPN-------IPANEKASNSSFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGISTTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGSEFLLFLNQHNIKADVL---SLGVPDMFIPHGNPETILNLIGLTSDHITQRILS 624 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |