CX043881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CHLTA (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=dxs PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14 Identity = 54/165 (32.73%), Postives = 77/165 (46.67%), Query Frame = -1 Query: 262 PSCFRFPRGNGIGAVLPXNNKGT-------PLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 732 P R+P +P N K + P+ G+ IL +GD + ++ G + + L IS TV D F KPLD L++ L H +I +EE S+ GG GS FL I L S+ +PD +I HG+P L GL+S HI+ +LS Sbjct: 470 PCAIRYPN-------IPANEKASNSFFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGISTTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGSEFLLFLNQHNIKADVL---SLGVPDMFIPHGNPETILNLIGLTSDHITQRILS 624
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CHLT2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=dxs PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.618e-14 Identity = 54/165 (32.73%), Postives = 77/165 (46.67%), Query Frame = -1 Query: 262 PSCFRFPRGNGIGAVLPXNNKGT-------PLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLS 732 P R+P +P N K + P+ G+ IL +GD + ++ G + + L IS TV D F KPLD L++ L H +I +EE S+ GG GS FL I L S+ +PD +I HG+P L GL+S HI+ +LS Sbjct: 470 PCAIRYPN-------IPANEKASNSSFPFSPILPGEAEILCQGDDLLLIALGHMCNTALTVKEHLLDYGISTTVVDPIFIKPLDRKLLQSLLTHHSKVIILEEHSIHGGLGSEFLLFLNQHNIKADVL---SLGVPDMFIPHGNPETILNLIGLTSDHITQRILS 624
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRASN (1-deoxy-D-xylulose-5-phosphate synthase OS=Frankia sp. (strain EAN1pec) GN=dxs PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13 Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = -1 Query: 232 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALL 738 D P+ R+P+G + G + + V ++ G++ C+ A + SQ I +TV D R+ KPLD L+ LA +H++++TVE+ G VGG G+ V L + D + +R + R++DHG D L E GL+ + ++ V+ + + + AL+ Sbjct: 466 DGPTVVRYPKGKVAADSPAIDQVGGVDVLYRAPAAARHREVLLVSIGAMAPTCLDVAERVASQGIGITVVDPRWVKPLDPALV-DLARDHDLVVTVEDNGRVGGVGACVAQLLRDA---DVDVPVREFGVAQRFLDHGKRDDVLAEVGLAPQDLARKVIEAVAKRQHALM 631
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CLOD6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Clostridium difficile (strain 630) GN=dxs PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13 Identity = 48/164 (29.27%), Postives = 88/164 (53.66%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGP--LKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 D P R+PRG+ L G + +GK +L +G IL GS+V+ + A +L + I+ T+ +ARF KP+D +++ L H+ ++T+E+ V GGFGS + F I+D + + ++ +P+ ++ HG+ + + GLS + I+ + L+ Sbjct: 464 DCPLAIRYPRGSSY--YLDKGEYGE-IVLGKYEVLDDGQDTVILCIGSMVKHALEAKEILSREGINPTIVNARFLKPIDEGMLKALLKNHKNVVTIEDNIVTGGFGSRINKF-----IIDNEYNVNILNIAIPEEFVKHGNIDELYDFVGLSPKSIADKIRKLV 619
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_FRASC (1-deoxy-D-xylulose-5-phosphate synthase OS=Frankia sp. (strain CcI3) GN=dxs PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13 Identity = 49/169 (28.99%), Postives = 87/169 (51.48%), Query Frame = -1 Query: 235 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 738 D P+ RFP+G V + G + + + + V ++ G++ C+ A + SQ I +TV D R+ KPLD LI LA H++++TVE+ G VGG G+ + L + D + LR + R++DHG + + E GL+ + ++ V+ + + + A+ Sbjct: 466 DGPTVVRFPKGKVAVDVPAIDTVGGVDVLYRSPKVAQRREVLLVSIGAMAATCLEVAERVASQGIGITVVDPRWVKPLDPALI-DLARAHDLVVTVEDNGRVGGVGAALAQLLRDA---DVDVPLRDFGIAQRFLDHGKRDEVMAEVGLAPQDLARKVVEAVAKRQPAI 630
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_SYNWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=dxs PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13 Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = -1 Query: 328 PSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHG 732 P R+PRG G G + + LE G+ R++ EG +AI+ G V ++L + ++ + DARF KPLD +I A ++ L+T+E+ S+ GGFGS + L GI +L + LPD +++HG Sbjct: 466 PVAIRYPRGVGEGVRIKSERQ--LLEPGQSRLIAEGQDLAIIAVGRGVSIARDVVDLLAGKGVNPLLVDARFVKPLDRRVIAGAAQKYHRLLTIEDNSLAGGFGSAIGEMLVEEGI---DAELLHIALPDEFVEHG 596
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_CHRSD (1-deoxy-D-xylulose-5-phosphate synthase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=dxs PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13 Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = -1 Query: 268 TAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 756 +AA P+ R+PRG G G + N + P+ + R VA+L +GS+ A L + +++ R KPLD + I A +H +L+T+EE V GG GS V L G+ +++ ++ LPD +++HG PA+ L GL + I V Sbjct: 487 SAAYHHPGPAAVRYPRGTGPGTQVASNLEALPIGEAETRRSGREGGVALLAFGSMNGPAGEVAERLDATHLNM-----RSVKPLDREAILAAARDHRLLVTLEESVVAGGAGSGVNELLAAEGV---QVEVLNLGLPDDFVEHGKPAELLAACGLDAEGIETAV 642
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_MYCS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Mycobacterium smegmatis GN=dxs PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13 Identity = 49/163 (30.06%), Postives = 86/163 (52.76%), Query Frame = -1 Query: 268 AAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATV 753 A ++D P+ RFP+G+ +G +P + +++ V ++ GS + + A +L+SQ I VTV D R+ P+ + + LA +H++++TVE+ G GG GS V L + I + R + +P ++ DH S + L E GL+ RHI+ + Sbjct: 459 ALAVNDGPTAIRFPKGD-VGEDIPAVQRRDGVDVLAVPATGLTHDVLLVAVGSFAKMALAVAELLRSQGIGVTVVDPRWVLPV-PEALADLARDHKLVVTVEDNGLHGGIGSSVSAALRHAEI---DVPCRDVGVPQQFQDHASRGEVLAEVGLTDRHIARQI 616
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_THESQ (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermotoga sp. (strain RQ2) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13 Identity = 51/162 (31.48%), Postives = 85/162 (52.47%), Query Frame = -1 Query: 256 DRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLL 738 D P R+P+ + G V +++G +IL G AI+ G+++ N + + VTV +A KPLDT +++++A EH+++ITVEE +GGFGS V L G K+ ++ + D ++ HGS + L GL S ++ TVL+ + Sbjct: 449 DGPVAIRYPKESFYGEVEFFLENMKEIDLG-WKILKRGREAAIIATGTIL-------NEVLKIPLDVTVVNALTVKPLDTTVLKEIAREHDLIITVEEAMKIGGFGSFVAQRLQEMGWQG---KIVNLGVEDIFVPHGSRKELLSMLGLDSEGLTKTVLTYI 599
BLAST of CX043881 vs. ExPASy Swiss-Prot
Match: DXS_DESHY (1-deoxy-D-xylulose-5-phosphate synthase OS=Desulfitobacterium hafniense (strain Y51) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13 Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = -1 Query: 292 HMVATAAVIDDRPSCFRFPRGNGIGAVLPXNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLS 768 HM+ T+ +D P R+PR G G L + P +GK IL EG + ++G G +V C+ AA L+ + + TV + R+ PLD + I + A + +ITVE+ + GG GS V L G+ D ++ D Y+D G+ + + GLS Sbjct: 455 HMLYTSLQLDG-PVALRYPRSVGQGVELTEELRELP--VGKAEILQEGKDITLIGVGPMVYTCLAAAVELRHRGVEATVINLRYINPLDRESILRYARMTKRIITVEDHMLAGGMGSAVMEVLGDEGLTDVVVERLGY---DEYVDQGAISLLHQGYGLS 608 The following BLAST results are available for this feature:
BLAST of CX043881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 453
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043881 ID=CX043881; Name=CX043881; organism=Citrus sinensis; type=EST; length=768bpback to top |